KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 17:20:30 2014 Check: 00 ..
Name: ENSP00000357283/1-664 Len: 669 Check: 9955 Weight: 1.00
Name: ENSBTAP00000023373/1-664 Len: 669 Check: 9193 Weight: 1.00
Name: ENSTTRP00000001313/1-664 Len: 669 Check: 9861 Weight: 1.00
Name: bmy_03405T0/1-499 Len: 669 Check: 2664 Weight: 1.00
Name: BACU003946/1-664 Len: 669 Check: 9278 Weight: 1.00
//
1 50
ENSP00000357283/1-664 METPSQRRAT RSGAQASSTP LSPTRITRLQ EKEDLQELND RLAVYIDRVR
ENSBTAP00000023373/1-664 METPSQRRAT RSGAQASSTP LSPTRITRLQ EKEDLQELND RLAVYIDRVR
ENSTTRP00000001313/1-664 METPSQRRAT RGGAQGSSTP LSPTRITRLQ EKEDLQELND RLAVYIDRVR
bmy_03405T0/1-499 ---------- ---------- ---------- ---------- ----------
BACU003946/1-664 METPSQRRAT RSGAQAGSTP LSPTRITRLQ EKEDLQELND RLAVYIDRVR
51 100
ENSP00000357283/1-664 SLETENAGLR LRITESEEVV SREVSGIKAA YEAELGDARK TLDSVAKERA
ENSBTAP00000023373/1-664 SLETENAGLR LRITESEEVV SREVSGIKAA YEAELGDARK TLDSVAKERA
ENSTTRP00000001313/1-664 SLETENAGLR LRITESEEVV SREVSGIKAA YEAELGDARK TLDSVAKERA
bmy_03405T0/1-499 ---------- ---------- ---------- ---------- ----------
BACU003946/1-664 SLETENAGLR LRITESEEVV SREVSGIKAA YEAELGDARK TLDSVAKERA
101 150
ENSP00000357283/1-664 RLQLELSKVR EEFKELKARN TKKEGDLIAA QARLKDLEAL LNSKEAALST
ENSBTAP00000023373/1-664 RLQLELSKVR EEFKELKARN SKKEGDLMAA QARLKDLEAL LNSKEAALST
ENSTTRP00000001313/1-664 RLQLELSKVR EEFKDLKARN TKKEGDLMAA QARLKDLEAL LNSKEAALST
bmy_03405T0/1-499 ---------- ---------- -------MAA QARLKDLEAL LNSKEAALST
BACU003946/1-664 RLQLELSKVR EEFKELKARN TKKEGDLMAA QARLKDLEAL LNSKEAALST
151 200
ENSP00000357283/1-664 ALSEKRTLEG ELHDLRGQVA KLEAALGEAK KQLQDEMLRR VDAENRLQTM
ENSBTAP00000023373/1-664 ALSEKRTLEG ELHDLRGQVA KLEAALGEAK KQLQDEMLRR VDAENRLQTL
ENSTTRP00000001313/1-664 ALSEKRTLEG ELHDLRGQVA KLEAALSEAK KQLQDEMLRR VDAENRLQTL
bmy_03405T0/1-499 ALSEKRTLEG ELHDLRGQVA K--------- ---------- ----------
BACU003946/1-664 ALSEKRTLEG ELHDLRGQVA KLEAALGEAK KQLQDEMLRR VDAENRLQTL
201 250
ENSP00000357283/1-664 KEELDFQKNI YSEELRETKR RHETRLVEID NGKQREFESR LADALQELRA
ENSBTAP00000023373/1-664 KEELDFQKNI YSEELRETKR RHETRLVEID NGKQREFESR LADALQELRA
ENSTTRP00000001313/1-664 KEELDFQKNI YSEELRETKR RHETRLVEID NGKQREFESR LADALQELRA
bmy_03405T0/1-499 ---------- ---ELRETKR RHETRLVEID NGKQREFESR LADALQELRA
BACU003946/1-664 KEELDFQKNI YSEELRETKR RHETRLVEID NGKQREFESR LADALQELRA
251 300
ENSP00000357283/1-664 QHEDQVEQYK KELEKTYSAK LDNARQSAER NSNLVGAAHE ELQQSRIRID
ENSBTAP00000023373/1-664 QHEDQVEQYK KDLEKTYSAK LDNARQSAER NSNLAGAAHE ELQQSRIRID
ENSTTRP00000001313/1-664 QHEDQVEQYK KELEKTYSAK LDNARQSAER NSNLMGAAHE ELQQSRVRID
bmy_03405T0/1-499 QHEDQVEQYK KELEKTYSAK LDNARQSAER NSNLVGAAHE ELQQSRVRID
BACU003946/1-664 QHEDQVEQYK KELEKTYSAK LDNARQSAER NSNLVGAAHE ELQQSRVRID
301 350
ENSP00000357283/1-664 SLSAQLSQLQ KQLAAKEAKL RDLEDSLARE RDTSRRLLAE KEREMAEMRA
ENSBTAP00000023373/1-664 SLSAQLSQLQ KQLAAKEAKL RDLEDSLARE RDTSRRLLAD KEREMAEMRA
ENSTTRP00000001313/1-664 SLSAQLSQLQ KQLAAKEAKL RDLEDSLARE RDTSRRLLAD KEREMAEMRA
bmy_03405T0/1-499 SLSAQLSQLQ KQLAAKEAKL RDLEDSLARE RDTSRRLLAD KEREMAEMRA
BACU003946/1-664 SLSAQLSQLQ KQLAAKEAKL RDLEDSLARE RDTSRRLLAD KEREMAEMRA
351 400
ENSP00000357283/1-664 RMQQQLDEYQ ELLDIKLALD MEIHAYRKLL EGEEERLRLS PSPTSQRSRG
ENSBTAP00000023373/1-664 RMQQQLDEYQ ELLDIKLALD MEIHAYRKLL EGEEERLRLS PSPTSQRSRG
ENSTTRP00000001313/1-664 RMQQQLDEYQ ELLDIKLALD MEIHAYRKLL EGEEERLRLS PSPTSQRSRG
bmy_03405T0/1-499 RMQQQLDEYQ ELLDIKLALD MEIHAYRKLL EGEEERLRLS PSPTSQRSRG
BACU003946/1-664 RMQQQLDEYQ ELLDIKLALD MEIHAYRKLL EGEEERLRLS PSPTSQRSRG
401 450
ENSP00000357283/1-664 RASSHSSQTQ GGGSVTKKRK LESTESRSSF SQHARTSGRV AVEEVDEEGK
ENSBTAP00000023373/1-664 RASSHSSQTQ SGSSVTKKRK LESTESRSSF SQHARTSGRV AVEEVDEEGK
ENSTTRP00000001313/1-664 RASSHSSQTQ SGGSITKKRK LESTESRSSF SQHARTSGRV AVEEVDEEGK
bmy_03405T0/1-499 RASSHSSQTQ SGGSIAKKRK LESTESRSSF SQHARTSGRV AVEEVDEEGK
BACU003946/1-664 RASSHSSQTQ SGGSTAKKRK LESTESRSSF SQHARTSGRV AVEEVDEEGK
451 500
ENSP00000357283/1-664 FVRLRNKSNE ----DQSMGN WQIKRQNGDD PLLTYRFPPK FTLKAGQVVT
ENSBTAP00000023373/1-664 FVRLRNKSNE ----DQSMGN WQIKRQNGDD PLLTYRFPPK FTLKAGQVVT
ENSTTRP00000001313/1-664 FVRLRNKSNE ----DQSMGN WQIKRQNGDD PLLTYRFPPK FTLKAGQVVT
bmy_03405T0/1-499 FVRLRNKSNE VVPQDQSMGN WQIKRQNGDD PLLTYRFPPK FTLKAGQVVT
BACU003946/1-664 FVRLRNKSNE ----DQSMGN WQIKRQNGDD PLLTYRFPPK FTLKAGQVVT
501 550
ENSP00000357283/1-664 IWAAGAGATH SPPTDLVWKA QNTWGCGNSL RTALINSTGE EVAMRKLVRS
ENSBTAP00000023373/1-664 IWAAGAGATH SPPTDLVWKA QNTWGCGNSL RTALINSTGE EVAMRKLVRS
ENSTTRP00000001313/1-664 IWAAGAGATH SPPTDLVWKA QNTWGCGNSL RTALINSTGE EVAMRKLVRS
bmy_03405T0/1-499 IWAAGAGATH SPPTDLVWKA QNTWGCGNSL RTALINSTGE EVAMRKLVRS
BACU003946/1-664 IWAAGAGATH SPPTDLVWKA QNTWGCGNSL RTALINSTGE EVAMRKLVRS
551 600
ENSP00000357283/1-664 VTVVEDDEDE DGDDLLHHHH GSH-CSSSGD PAEYNLRSRT VLCGTCGQPA
ENSBTAP00000023373/1-664 VIVVEDDNDE DGDDLLHHHH GSHAGSSSGD PAEYNLRSRT VLCGTCGQPA
ENSTTRP00000001313/1-664 VTMVEDDEDE DGDDLLHHHH GSH-GSSSGD PAEYNLRSRT VLCGTCGQPA
bmy_03405T0/1-499 VTMVDDDEDE DGDDLLHHHH GSH-GSSSGD PAEYNLRSRT VLCGTCGQPA
BACU003946/1-664 VTMVDDDEDE DGDDLLHHHH GSH-GSSSGD PAEYNLRSRT VLCGTCGQPA
601 650
ENSP00000357283/1-664 DKASASGSGA QVGGPISSGS SASSVTVTRS YRSVGGSGGG SFGDNLVTRS
ENSBTAP00000023373/1-664 DKASAS-SGA QVGGSISSGS SASSVTVTRS YRSVGGSGGG SFGDSLVTRS
ENSTTRP00000001313/1-664 DKASASSSGA QVGGSISSGS SASSVTVTRS YRGVGGSGGG SFGDSLVTRS
bmy_03405T0/1-499 DKASASSSGA QVGGSISSGS SASSVTVTRS YRSVGGSGGG SFGDSLVTRS
BACU003946/1-664 DKASASSSGA QVGGSISSGS SASSITVTRS YRSVGGSGGG SFGDSLVTRS
651 700
ENSP00000357283/1-664 YLLGNSSPRT QSPQNCSIM
ENSBTAP00000023373/1-664 YLLGNSRPRT QSPQNCSIM
ENSTTRP00000001313/1-664 YLLGNSRLRT QSPQNCSIM
bmy_03405T0/1-499 YLLGNSRPRT QNPQNCSIM
BACU003946/1-664 YLLGNSRPRT QNPQNCSIM