KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:20:32 2014 Check: 00 .. Name: ENSP00000290524/1-616 Len: 667 Check: 3462 Weight: 1.00 Name: ENSBTAP00000023377/1-615 Len: 667 Check: 2858 Weight: 1.00 Name: bmy_11116T0/1-657 Len: 667 Check: 8971 Weight: 1.00 Name: BACU007250/1-448 Len: 667 Check: 709 Weight: 1.00 Name: ENSTTRP00000006643/1-616 Len: 667 Check: 6353 Weight: 1.00 // 1 50 ENSP00000290524/1-616 ---------- ---------- ---------- ---------- ---------M ENSBTAP00000023377/1-615 ---------- ---------- ---------- ---------- ---------M bmy_11116T0/1-657 MVEQAVRVSR QIGAVSAIQK KENKATHEPA GPGPWGWAGV KVAASPHAGM BACU007250/1-448 ---------- ---------- ---------- ---------- ---------M ENSTTRP00000006643/1-616 ---------- ---------- ---------- ---------- ---------M 51 100 ENSP00000290524/1-616 AEDEPDAKSP KTGGRAPPGG AEAGEPTTLL QRLRGTISKA VQNKVEGILQ ENSBTAP00000023377/1-615 AEDEPDAKSP KTGGRTSSGS AEAGEPTTLL QRLRGTISKA VQNKVEGILQ bmy_11116T0/1-657 AEDEPDAKSP KTGGRAPSGS AEAGEPTTLL QRLRGTISKA VQNKVEGILQ BACU007250/1-448 AEDEPDAKSP KTGGRAPSGS AEAGEPTTLL QRLRGTISKA VQNKVEGILQ ENSTTRP00000006643/1-616 AEDEPDAKSP KTGGRAPSGS AEAGEPTTLL QRLRGTISKA VQNKVEGILQ 101 150 ENSP00000290524/1-616 DVQKFSDNDK LYLYLQLPSG PTTGDKSSEP STLSNEEYMY AYRWIRNHLE ENSBTAP00000023377/1-615 DVQKFSDNDK LYLYLQLPSG PSTGDKSSEP STLSNEEYMY AYRWIRNHLE bmy_11116T0/1-657 DVQKFSDNDK LYLYLQLPSG PSTGDKSSEP STLSNEEYMY AYRWIRNHLE BACU007250/1-448 DVQKFSDNDK LYLYLQLPSG PSTGDKSSEP STLSNEEYMY AYRWIRNHLE ENSTTRP00000006643/1-616 DVQKFSDNDK LYLYLQLPSG PSTGDKSSEP STLSNEEYMY AYRWIRNHLE 151 200 ENSP00000290524/1-616 EHTDTCLPKQ SVYDAYRKYC ESLACCRPLS TANFGKIIRE IFPDIKARRL ENSBTAP00000023377/1-615 EHTDTCLPKQ SVYDAYRKYC ESLACCRPLS TANFGKIIRE IFPDIKARRL bmy_11116T0/1-657 EHTDTCLPKQ SVYDAYRKYC ESLACCRPLS TANFGKIIRE IFPDIKARRL BACU007250/1-448 EHTDTCLPKQ SVYDAYRKYC ESLACCRPLS TANFGKIIRE IFPDIKARRL ENSTTRP00000006643/1-616 EHTDTCLPKQ SVYDAYRKYC ESLACCRPLS TANFGKIIRE IFPDIKARRL 201 250 ENSP00000290524/1-616 GGRGQSKYCY SGIRRKTLVS MPPLPGLDLK GSESPEMGPE VTPAPRDELV ENSBTAP00000023377/1-615 GGRGQSKYCY SGIRRKTLVS MPPLPGLDLK GSESPEMGPE VTPAPRDEVV bmy_11116T0/1-657 GGRGQSKYCY SGIRRKTLVS MPPLPGLDLK GSESPEMGPE VTPAPRDELV BACU007250/1-448 GGRGQSKYCY SGIRRKTLVS MPPLPGLDLK GSESPEMGPE VTPAPRDELV ENSTTRP00000006643/1-616 GGRGQSKYCY SGIRRKTLVS MPPLPGLDLK GSESPEMGPE VTPAPRDELV 251 300 ENSP00000290524/1-616 EAACALTCDW AERILKRSFS SIVEVARFLL QQHLISARSA HAHVLKAMGL ENSBTAP00000023377/1-615 EAACALTCDW AERILKRSFS SIVEVARFLL QQHLISARSA HAHVLKTVGL bmy_11116T0/1-657 EAACALTCDW AERILKRSFS SIVEVARFLL QQHLISARSA HANVLKAMGL BACU007250/1-448 EAACALTCDW AERILKRSFS SIVEVARFLL QQHLISARSA HANVLKAMGL ENSTTRP00000006643/1-616 EAACALTCDW AERILKRSFS SIVEVARFLL QQHLISARSA HANVLKAMGL 301 350 ENSP00000290524/1-616 AEEDEHAPRE RSSKPKNGLE NPEGGAHKKP ERLAQPPKDL EARTGAGPLA ENSBTAP00000023377/1-615 AEEDEHAPRE RSSKSKNGVE NLEGGSHKRP ERQVQPPKEL DPRAGAGPSA bmy_11116T0/1-657 AEEDEHAPRE RSSKSKNGVE SLEGGXHKKP ERQAQPPKEL DPXAGAGPPA BACU007250/1-448 AEEDEHAPRE RSSKSKNGVE NLEGGAHKRP ERQAQPPKEL DPRAGAGPPA ENSTTRP00000006643/1-616 AEEDEHAPRE RSSKSKNGVE NLEGGAHKRP ERQAQPPKEL DPRAGAGLPA 351 400 ENSP00000290524/1-616 RGERKKSVVE SSAPGANNLQ VNALVARLPL LLPRAPRSLI PPIPVSPPIL ENSBTAP00000023377/1-615 RGERKKSVAE SPAPVANNPQ VNALVARLPL LLPRAPRSLI PPIRVSPPIL bmy_11116T0/1-657 RGERKKSVVE SPAPAANNPQ VNALVARLPL LLPRAPRSLI PPIRVSPPVL BACU007250/1-448 RGERKKSVVE SPAPAANNPQ VNALVARLPL LLPRAPRSLI PPIRVSPPVL ENSTTRP00000006643/1-616 RGERKKSVVE SPAPAANNPQ VNALVARLPL LLPRAPRSLI PPIRVSPPVL 401 450 ENSP00000290524/1-616 APRLSSGALK VATLPLSSRA GAPPAAVPII NMILPTVPAL PGPGP--GPG ENSBTAP00000023377/1-615 APKLSSGTLK MAALPLPSRA GGPQAAVPII NMILPTVPAL PGPGP--GPG bmy_11116T0/1-657 APKLSSSTLK MATLPLPPRA GGPQAAVPII NMILPTVPAL PGPGPGPGPG BACU007250/1-448 APKLSSSTLK MATLPLPPRA GGPQAAVPII NMILPTVPAL PGPGPGPGPG ENSTTRP00000006643/1-616 APKLSSSTLK MATLPLPPRA GGPQAAVPII NMILPTVPAL PGPGPGPGPG 451 500 ENSP00000290524/1-616 RAPPGGLTQP RGTENREVGI GGDQGPHDKG VKRTAEVPVS EASGQAPPAK ENSBTAP00000023377/1-615 QAPPGGLAQP RSAENREVGI GGDLGPHDKG VKRTAEVPVS EASGQDPPAK bmy_11116T0/1-657 QAPPGGLTQP RGTENREVGI GGDPGPHDKG VKRTAEVPVS EASGQDPPAK BACU007250/1-448 QAPPGGLTQP RGTENREVGI GGDPGPHDKG VKRTAEVP-- ---------- ENSTTRP00000006643/1-616 QAPPGGLTQP RGTENREVGI GGDPGPHDKG VKRTAEVPVS EASGQDPPAK 501 550 ENSP00000290524/1-616 AAKQDIEDTA SDAKRKRGRP RKKSGGSGER NSTPLKSAAA MESAQSSRLP ENSBTAP00000023377/1-615 ATKQDLDDTG SDAKRKRGRP RKKSGGSRER NSTPDKSAAA VDSAQSSRLP bmy_11116T0/1-657 ATKQDIEDTG SDAKRKRGRP RKKSGGSRER NSTPDKSAAA VDSAQSSRLP BACU007250/1-448 ---------- ---------P LQFLG----- ---------- ---------- ENSTTRP00000006643/1-616 ATKQDIEDTG SDAKRKRGRP RKKLGGSRER NSTPDKSAAA VDSAQSSRLP 551 600 ENSP00000290524/1-616 WETWGSGGEG NSAGGAERPG PMGEAEKGAV LAQGQGDGTV SKGGRGPGSQ ENSBTAP00000023377/1-615 REAWASGGES NSAGGSGGPG PVGEAEKG-V LAQGQEDGAV SKGGRGPSSR bmy_11116T0/1-657 LETWASGGEG NSAGGSERPG PMGEAEKE-M LAQGQEDGAV SRGGRGPSSR BACU007250/1-448 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006643/1-616 LETWASGGQG NSAGGSERPG PMGEAEKE-M LAQGQADGAV SRGGRGPSSR 601 650 ENSP00000290524/1-616 HTKEAEDKIP LVPSKVSVIK GSRSQKEAFP LAKGEVDTAP QGNKDLKEHV ENSBTAP00000023377/1-615 HAKEAEDKIP PVTPKVSVIR GSRSQKEALH LVRGEVDTSA QGNKDLKGHV bmy_11116T0/1-657 HAKEAEDKIP PVTPKVSVIK GSRSQKEALH LVKEEVDTAA QGNKDLKGHV BACU007250/1-448 ---------- -----VCV-- ---------- ---------- ---------- ENSTTRP00000006643/1-616 HAKEAEDKIP PVTPKVSVIK GSRSQKEALH LVKGEVDTAA QGNKDLKGHV 651 700 ENSP00000290524/1-616 LQSSLSQEHK DPKATPP ENSBTAP00000023377/1-615 LPSSIPHERK DPKAAPP bmy_11116T0/1-657 LQSSLPHE-- ------- BACU007250/1-448 ---------- ------- ENSTTRP00000006643/1-616 LQSSLPHE-K DPKATPP