KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:20:33 2014 Check: 00 .. Name: ENSTTRP00000002515/1-1290 Len: 1291 Check: 4215 Weight: 1.00 Name: ENSP00000362369/1-1291 Len: 1291 Check: 711 Weight: 1.00 Name: ENSBTAP00000023383/1-1219 Len: 1291 Check: 5341 Weight: 1.00 Name: bmy_07292T0/1-1218 Len: 1291 Check: 4788 Weight: 1.00 Name: BACU015493/1-1257 Len: 1291 Check: 4714 Weight: 1.00 // 1 50 ENSTTRP00000002515/1-1290 MAGAASPCAN GCGPGAPSDA EVLHLCRSLE VGTVMTLFYS KKSQRPERKT ENSP00000362369/1-1291 MAGAASPCAN GCGPGAPSDA EVLHLCRSLE VGTVMTLFYS KKSQRPERKT ENSBTAP00000023383/1-1219 ---------- ---------- ---------- ---------- ---------- bmy_07292T0/1-1218 ---------- ---------- ---------- ---------- ---------- BACU015493/1-1257 ---------- ---------- ---------- ----MTLFYS KKSQRPERKT 51 100 ENSTTRP00000002515/1-1290 FQVKLETRQI TWSRGADKIE GSIDIREIKE IRPGRTSRDF DRYQEDPAFR ENSP00000362369/1-1291 FQVKLETRQI TWSRGADKIE GAIDIREIKE IRPGKTSRDF DRYQEDPAFR ENSBTAP00000023383/1-1219 ---------- ---------- --VDIREIKE IRPGKTSRDF DRYQEDPAFR bmy_07292T0/1-1218 ---------- ---------- ---DIREIKE IRPGKTSRDF DRYQEDPAFR BACU015493/1-1257 FQVKLETRQI TWSRGADKIE GAIDIREIKE IRPGKTSRDF DRYQEDPAFR 101 150 ENSTTRP00000002515/1-1290 PDQSHCFVIL YGMEFRLKTL SLQATSEDEV NMWIKGLTWL MEDTLQAATP ENSP00000362369/1-1291 PDQSHCFVIL YGMEFRLKTL SLQATSEDEV NMWIKGLTWL MEDTLQAPTP ENSBTAP00000023383/1-1219 PDQSHCFVIL YGMEFRLKTL SLQATSEDEV NMWIKGLTWL MEDTLQAATP bmy_07292T0/1-1218 PDQSHCFVIL YGMEFRLKTL SLQATSEDEV NMWIKGLTWL MEDTLQAATP BACU015493/1-1257 PDQSHCFVIL YGMEFRLKTL SLQATSEDEV NMWIKGLTWL MEDTLQAATP 151 200 ENSTTRP00000002515/1-1290 LQIERWLRKQ FYSVDRNRED RISAKDLKNM LSQVNYRVPN MRFLRERLTD ENSP00000362369/1-1291 LQIERWLRKQ FYSVDRNRED RISAKDLKNM LSQVNYRVPN MRFLRERLTD ENSBTAP00000023383/1-1219 LQIERWLRKQ FYSVDRNRED RISAKDLKNM LSQVNYRVPN MRFLRERLTD bmy_07292T0/1-1218 LQIERWLRKQ FYSVDRNRED RISAKDLKNM LSQVNYRVPN MRFLRERLTD BACU015493/1-1257 LQIERWLRKQ FYSVDRNRED RISAKDLKNM LSQVNYRVPN MRFLRERLTD 201 250 ENSTTRP00000002515/1-1290 LEQRTSDITY GQFAQLYRSL MYSAQKTMDL PFLEASALRA GERPELCRVS ENSP00000362369/1-1291 LEQRSGDITY GQFAQLYRSL MYSAQKTMDL PFLEASTLRA GERPELCRVS ENSBTAP00000023383/1-1219 LEQRTSDITY GQFAQLYRSL MYSAQKTMDL PFLEASALRA GERPELCRVS bmy_07292T0/1-1218 LEQRTSDITY GQFAQLYRSL MYSAQKTMDL PFLEASALRA GERPELCRVS BACU015493/1-1257 LEQRTSDITY GQFAQLYRSL MYSAQKTMDL PFLEASALRA GERPELCRVS 251 300 ENSTTRP00000002515/1-1290 LPEFQQFLLE YQGELWAVDR LQVQEFMLSF LRDPLREIEE PYFFLDEFVT ENSP00000362369/1-1291 LPEFQQFLLD YQGELWAVDR LQVQEFMLSF LRDPLREIEE PYFFLDEFVT ENSBTAP00000023383/1-1219 LPEFQQFLLE YQGELWAVDR LQVQEFMLSF LRDPLREIEE PYFFLDEFVT bmy_07292T0/1-1218 LPEFQQFLLE YQGELWAVDR LQVQEFMLSF LRDPLREIEE PYFFLDEFVT BACU015493/1-1257 LPEFQQFLLE YQGELWAVDR LQVQEFMLSF LRDPLREIEE PYFFLDEFVT 301 350 ENSTTRP00000002515/1-1290 FLFSKENSIW NSQLDAVCPD TMNNPLSHYW ISSSHNTYLT GDQFSSESSL ENSP00000362369/1-1291 FLFSKENSVW NSQLDAVCPD TMNNPLSHYW ISSSHNTYLT GDQFSSESSL ENSBTAP00000023383/1-1219 FLFSKENSIW NSQLDEVCPD TMNNPLSHYW ISSSHNTYLT GDQFSSESSL bmy_07292T0/1-1218 FLFSKENSIW NSQLDAVCPD TMNNPLSHYW ISSSHNTYLT GDQFSSESSL BACU015493/1-1257 FLFSKENSIW NSQLDAVCPD TMNNPLSHYW ISSSHNTYLT GDQFSSESSL 351 400 ENSTTRP00000002515/1-1290 EAYARCLRMG CRCIELDCWD GPDGMPVIYH GHTLTTKIKF SDVVHTIKEH ENSP00000362369/1-1291 EAYARCLRMG CRCIELDCWD GPDGMPVIYH GHTLTTKIKF SDVLHTIKEH ENSBTAP00000023383/1-1219 EAYARCLRMG CRCIELDCWD GPDGMPVIYH GHTLTTKIKF SDVLHTIKEH bmy_07292T0/1-1218 EAYARCLRMG CRCIELDCWD GPDGMPVIYH GHTLTTKIKF SDVLHTIKEH BACU015493/1-1257 EAYARCLRMG CRCIELDCWD GPDGMPVIYH GHTLTTKIKF SDVLHTIKEH 401 450 ENSTTRP00000002515/1-1290 AFVASEYPVI LSIEDHCSIA QQRNMAQYFK KVLGDTLLTK PVDIAADGLP ENSP00000362369/1-1291 AFVASEYPVI LSIEDHCSIA QQRNMAQYFK KVLGDTLLTK PVEISADGLP ENSBTAP00000023383/1-1219 AFVASEYPVI LSIEDHCSIA QQRNMAQYFK KVLGDTLLTK PVDIAADGLP bmy_07292T0/1-1218 AFVASEYPVI LSIEDHCSIA QQRNMAQYFK KVLGDTLLTK PVDIAADGLP BACU015493/1-1257 AFVASEYPVI LSIEDHCSIA QQRNMAQYFK KVLGDTLLTK PVDIAADGLP 451 500 ENSTTRP00000002515/1-1290 SPSQLKRKIL IKHKKLAEGS AYEEVPTSVM YSENDISNSI KNGILYLEDP ENSP00000362369/1-1291 SPNQLKRKIL IKHKKLAEGS AYEEVPTSMM YSENDISNSI KNGILYLEDP ENSBTAP00000023383/1-1219 SPNQLKRKIL IKHKKLAEGS AYEEVPTSVM YSENDISNSI KNGILYLEDP bmy_07292T0/1-1218 SPSQLKRKIL IKHKKLAEGS AYEEVPTSVM YSENDISNSI KNGILYLEDP BACU015493/1-1257 SPSQLKRKIL IKHKKLAEGS AYEEVPTSVM YSENDISNSI KNGILYLEDP 501 550 ENSTTRP00000002515/1-1290 VNHEWYPHYF VLTSSKIYYS EETSSDQGNE DEEEPKEASG STELHSNEKW ENSP00000362369/1-1291 VNHEWYPHYF VLTSSKIYYS EETSSDQGNE DEEEPKEVSS STELHSNEKW ENSBTAP00000023383/1-1219 VNHEWYPHYF VLTSSKIYYS EETSSDQGNE DEEEPKEASG STELHSNEKW bmy_07292T0/1-1218 VNHEWYPHYF VLTSSKIYYS EETSSDQGNE DEEEPKEASG STELHSNEKW BACU015493/1-1257 VNHEWYPHYF VLTSSKIYYS EETSSDQGNE DEEEPKEASG STELHSNEKW 551 600 ENSTTRP00000002515/1-1290 FHGKLGAGRD GRHIAERLLT EYCIETGAPD GSFLVRESET FVGDYTLSFW ENSP00000362369/1-1291 FHGKLGAGRD GRHIAERLLT EYCIETGAPD GSFLVRESET FVGDYTLSFW ENSBTAP00000023383/1-1219 FHGKLGAGRD GRHIAERLLT EYCIETGAPD GSFLVRESET FVGDYTLSFW bmy_07292T0/1-1218 FHGKLGAGRD GRHIAERLLT EYCIETGAPD GSFLVRESET FVGDYTLSFW BACU015493/1-1257 FHGKLGAGRD GRHIAERLLT EYCIETGAPD GSFLVRESET FVGDYTLSFW 601 650 ENSTTRP00000002515/1-1290 RNGKVQHCRI HSRQDAGTPK FFLTDNLVFD SLYDLITHY- QVPLRCNEFE ENSP00000362369/1-1291 RNGKVQHCRI HSRQDAGTPK FFLTDNLVFD SLYDLITHYQ QVPLRCNEFE ENSBTAP00000023383/1-1219 RNGKVQHCRI HSRQDAGTPK FFLTDNLVFD SLYDLITHYQ QVPLRCNEFE bmy_07292T0/1-1218 RNGKVQHCRI HSRQDAGTPK FFLTDNLVFD SLYDLITHYQ QVPLRCNEFE BACU015493/1-1257 RNGKVQHCRI HSRQDAGTPK FFLTDNLVFD SLYDLITHYQ QVPLRCNEFE 651 700 ENSTTRP00000002515/1-1290 MRLSELVPQT NAHESKXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000362369/1-1291 MRLSEPVPQT NAHESKEWYH ASLTRAQAEH MLMRVPRDGA FLVRKRNEPN ENSBTAP00000023383/1-1219 MRLSEPVPQT NAHESKEWYH ASLTRAQAEH MLMRVPRDGA FLVRKRNEPN bmy_07292T0/1-1218 MRLSEPVPQT NAHESKEWYH ASLTRAQAEH MLMRVPRDGA FLVRKRNEPN BACU015493/1-1257 MRLSEPVPQT NAHESKEWYH ASLTRAQAEH MLMRVPRDGA FLVRKRNEPN 701 750 ENSTTRP00000002515/1-1290 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000362369/1-1291 SYAISFRAEG KIKHCRVQQE GQTVMLGNSE FDSLVDLISY YEKHPLYRKM ENSBTAP00000023383/1-1219 SYAISFRAEG KIKHCRVQQE GQTVMLGNSE FDSLVDLISY YEKHPLYRKM bmy_07292T0/1-1218 SYAISFRAEG KIKHCRVQQE GQTVMLGNSE FDSLVDLVSY YEKHPLYRKM BACU015493/1-1257 SYAISFRAEG KIKHCRVQQE GQTVMLGNSE FDSLVDLVSY YEKHPLYRKM 751 800 ENSTTRP00000002515/1-1290 XXXXXXXXXX XXXXXXXEPD YGALYEGRNP GFYVEANPMP TFKCAVKALF ENSP00000362369/1-1291 KLRYPINEEA LEKIGTAEPD YGALYEGRNP GFYVEANPMP TFKCAVKALF ENSBTAP00000023383/1-1219 KLRYPINEEA LEKIGTAEPD YGALYEGRNP GFYVEANPMP TFKCAVKALF bmy_07292T0/1-1218 KLRYPINEEA LEKIGTAEPD YGALYEGRNP GFYVEANPMP TFKCAVKALF BACU015493/1-1257 KLRYPINEEA LEKIGTAEPD YGALYEGRNP GFYVEANPMP TFKCAVKALF 801 850 ENSTTRP00000002515/1-1290 DYKAQREDEL TFTKSAIIQN VEKQEGGWWR GDYGGKKQLW FPSNYVEEMV ENSP00000362369/1-1291 DYKAQREDEL TFIKSAIIQN VEKQEGGWWR GDYGGKKQLW FPSNYVEEMV ENSBTAP00000023383/1-1219 DYKAQREDEL TFTKSAIIQN VEKQEGGWWR GDYGGKKQLW FPSNYVEEMV bmy_07292T0/1-1218 DYKAQREDEL TFTKSAIIQN VEKQEGGWWR GDYGGKKQLW FPSNYVEEMV BACU015493/1-1257 DYKAQREDEL TFTKSAIIQN VEKQEGGWWR GDYGGKKQLW FPSNYVEEMV 851 900 ENSTTRP00000002515/1-1290 SPAALEPERE HLDENSPLGD LLRGVLDVPA CQIAIRPEGK NHRLFVFSIS ENSP00000362369/1-1291 NPVALEPERE HLDENSPLGD LLRGVLDVPA CQIAIRPEGK NNRLFVFSIS ENSBTAP00000023383/1-1219 SPAALEPERE HLDENSPLGD LLRGVLDVPA CQIAVRPEGK NNRLFVFSIS bmy_07292T0/1-1218 SPAALEPERE HLDENSPLGD LLRGVLDVPA CQIAIRPEGK NSRLFVFSIS BACU015493/1-1257 SPAALEPERE HLDENSPLGD LLRGVLDVPA CQIAIRPEGK NNRLFVFSIS 901 950 ENSTTRP00000002515/1-1290 MASVAHWSLD VAADSQEELQ DWVKKIREVA QTADARLTEG KMMERRKKIA ENSP00000362369/1-1291 MASVAHWSLD VAADSQEELQ DWVKKIREVA QTADARLTEG KIMERRKKIA ENSBTAP00000023383/1-1219 MASVAHWSLD VAADSQEELQ DWVKKIREVA QTADARLTEG KMMERRKKIA bmy_07292T0/1-1218 MASVAHWSLD VAADSQEELQ DWVKKIREVA QTADARLTEG KMMERRKKIA BACU015493/1-1257 MASVAHWSLD VAADSQEELQ DWVKKIREVA QTADARLTEG KMMERRKKIA 951 1000 ENSTTRP00000002515/1-1290 LELSELVVYC RPVPFDEEKI GTERACYRDM SSFPETKAEK YVNKAKGKKF ENSP00000362369/1-1291 LELSELVVYC RPVPFDEEKI GTERACYRDM SSFPETKAEK YVNKAKGKKF ENSBTAP00000023383/1-1219 LELSELVVYC RPVPFDEEKI GTERACYRDM SSFPETKAEK YVNKAKGKKF bmy_07292T0/1-1218 LELSELVVYC RPVPFDEEKI GTERACYRDM SSFPETKAEK YVNKAKGKKF BACU015493/1-1257 LELSELVVYC RPVPFDEEKI GTERACYRDM SSFPETKAEK YVNKAKGKKF 1001 1050 ENSTTRP00000002515/1-1290 LQYNRLQLSR IYPKGQRLDS SNYDPLPMWI CGSQLVALNF QTPDKPMQMN ENSP00000362369/1-1291 LQYNRLQLSR IYPKGQRLDS SNYDPLPMWI CGSQLVALNF QTPDKPMQMN ENSBTAP00000023383/1-1219 LQYNRLQLSR IYPKGQRLDS SNYDPLPMWI CGSQLVALNF QTPDKPMQMN bmy_07292T0/1-1218 LQYNRLQLSR IYPKGQRLDS SNYDPLPMWI CGSQLVALNF QTPDKPMQMN BACU015493/1-1257 LQYNRLQLSR IYPKGQRLDS SNYDPLPMWI CGSQLVALNF QTPDKPMQMN 1051 1100 ENSTTRP00000002515/1-1290 QALFLAGGHC GYVLQPSIMR DEAFDPFDKS SLRGLEPCAI CIEVLGARHL ENSP00000362369/1-1291 QALFMTGRHC GYVLQPSTMR DEAFDPFDKS SLRGLEPCAI SIEVLGARHL ENSBTAP00000023383/1-1219 QALFLAGGHC GYVLQPSVMR DEAFDPFDKS SLRGLEPCAI CIEVLGARHL bmy_07292T0/1-1218 QALFLAGGHC GYVLQPSIMR DEAFDPFDKS SLRGLEPCAI CIEVLGARHL BACU015493/1-1257 QALFLAGGHC GYVLQPSIMR DEAFDPFDKS SLRGLEPCAI CIEVLGARHL 1101 1150 ENSTTRP00000002515/1-1290 PKNGRGIVCP FVEIEVAGAE YDSTKQKTEF VVDNGLNPMW PAKPFHFQIS ENSP00000362369/1-1291 PKNGRGIVCP FVEIEVAGAE YDSTKQKTEF VVDNGLNPVW PAKPFHFQIS ENSBTAP00000023383/1-1219 PKNGRGIVCP FVEIEVAGAE YDSIKQKTEF VVDNGLNPVW PAKPFHFQIS bmy_07292T0/1-1218 PKNGRGIVCP FVEIEVAGAE YDSTKQKTEF VVDNGLNPMW PAKPFHFQIS BACU015493/1-1257 PKNGRGIVCP FVEIEVAGAE YDSTKQKTEF VVDNGLNPMW PAKPFHFQIS 1151 1200 ENSTTRP00000002515/1-1290 NPEFAFLRFV VYEEDMFSDQ NFLAQATFPV KGLKTGYRAV PLKNNYSEDL ENSP00000362369/1-1291 NPEFAFLRFV VYEEDMFSDQ NFLAQATFPV KGLKTGYRAV PLKNNYSEDL ENSBTAP00000023383/1-1219 NPEFAFLRFV VYEEDMFSDQ NFLAQATFPV KGLKTGYRAV PLKNNYSEGL bmy_07292T0/1-1218 NPEFAFLRFV VYEEDMFSDQ NFLAQATFPV KGLKTGYRAV PLKNNYSEDL BACU015493/1-1257 NPEFAFLRFV VYEEDMFSDQ NFLAQATFPV KGLKTGYRAV PLKNNYSEDL 1201 1250 ENSTTRP00000002515/1-1290 ELASLLVKVD VFPAKQENGD LSPFGGASLR ERGCDASGQL FHGRAREGSF ENSP00000362369/1-1291 ELASLLIKID IFPAKQENGD LSPFSGTSLR ERGSDASGQL FHGRAREGSF ENSBTAP00000023383/1-1219 ELASLLVKID VFPAKQENGD LSPFGGASLR ERSCDASGPL FHGRAREGSF bmy_07292T0/1-1218 ELASLLVKVD VFPAKQENGD LSPFGGASLR ERGCDTSGQL FHGRAREGSF BACU015493/1-1257 ELASLLVKVD VFPAKQENGD LSPFGGASLR ERGCDTSGQL FHGRAREGSF 1251 1300 ENSTTRP00000002515/1-1290 EARYQQPFED FRISQEHLAD HFDSRERRAP RRTRVNGDNR L ENSP00000362369/1-1291 ESRYQQPFED FRISQEHLAD HFDSRERRAP RRTRVNGDNR L ENSBTAP00000023383/1-1219 EARYQQPFED FRISQEHLAD HFDGRDRRTP RRTRVNGDNR L bmy_07292T0/1-1218 EARYQQPFED FRISQEHLAD HFDSRERRAP RRTRVNGDNR L BACU015493/1-1257 EARYQQPFED FRISQEHLAD HFDSRERRAP RRTRVNGDNR L