KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:20:38 2014 Check: 00 .. Name: ENSBTAP00000023406/1-234 Len: 241 Check: 401 Weight: 1.00 Name: ENSP00000346921/1-239 Len: 241 Check: 2834 Weight: 1.00 Name: ENSTTRP00000008517/1-172 Len: 241 Check: 2286 Weight: 1.00 Name: bmy_11811T0/1-199 Len: 241 Check: 6791 Weight: 1.00 Name: BACU019522/1-169 Len: 241 Check: 4061 Weight: 1.00 // 1 50 ENSBTAP00000023406/1-234 MAPNVPAAEP VPESPKGVRA VLLGPPGAGK GTQAPKLAKN FCVCHLATGD ENSP00000346921/1-239 MAPSVPAAEP --EYPKGIRA VLLGPPGAGK GTQAPRLAEN FCVCHLATGD ENSTTRP00000008517/1-172 MAPNVPMAEP ARESPEGIRA VLLGPPGAGK GTQAPKLAEN FCVCHLATGD bmy_11811T0/1-199 MAPSVSVAEP ARECPEGIRA VLLGPPGAGK GTQ------- ---------- BACU019522/1-169 MAPSVSVAEP ARECPEGIRA VLLGPPGAGK GTQAPKLAEN FCVCHLATGD 51 100 ENSBTAP00000023406/1-234 MLRAMVASGS ELGKKLKATM DAGKLVSDEM VLELIEKNLE TPPCKNGFLL ENSP00000346921/1-239 MLRAMVASGS ELGKKLKATM DAGKLVSDEM VVELIEKNLE TPLCKNGFLL ENSTTRP00000008517/1-172 MLRAMVASGS ELGKKLKATM DAGKLVSDEM VVELIEKNLE TPPCKNGFLL bmy_11811T0/1-199 ---------- ---------- -----VSDEM VVELIEKNLE TPPCKNGFLL BACU019522/1-169 MLRAMVASGS ELGKKLKATM DAGKLVSDEM VVELIEKNLE TPPCKNGFLL 101 150 ENSBTAP00000023406/1-234 DGFPRTVRQA EMLDDLMEKR KEKLDSVIEF SIPDSLLIRR ITGRLIHPQS ENSP00000346921/1-239 DGFPRTVRQA EMLDDLMEKR KEKLDSVIEF SIPDSLLIRR ITGRLIHPKS ENSTTRP00000008517/1-172 DGFPRTVRQA EMLDDLMEKR KEKLDSVIEF SIPDSLLIRR ITGRLIHPES bmy_11811T0/1-199 DGFPRTVRQA EMLDDLMEKR KEKLDSVIEF SIPDSLLIRR ITGRLIHPES BACU019522/1-169 DGFPRTVRQA EMLDGLMEKR KEKLDSVIEF SIPDSLLIRR ITGRLIHPES 151 200 ENSBTAP00000023406/1-234 GRSYHEEFNP PKEPMKDDIT GEPLIRRSDD NKKALKIRLE AYHTQTTPLV ENSP00000346921/1-239 GRSYHEEFNP PKEPMKDDIT GEPLIRRSDD NEKALKIRLQ AYHTQTTPLI ENSTTRP00000008517/1-172 GRSYHEEFNP PKEPMKDDIT GE-------- ---------- ---------- bmy_11811T0/1-199 GRSYHEEFNP PKEPMKDDIT GEPLVRRSDD NEKALKIRLE AYHTQTAPLV BACU019522/1-169 GRSYHEEFNP PKEPMKDDV- ---------- ---------- ---------- 201 250 ENSBTAP00000023406/1-234 EYYSKRGIHS AIDASQTPDV VFASILAAFS KATS------ - ENSP00000346921/1-239 EYYRKRGIHS AIDASQTPDV VFASILAAFS KATCKDLVMF I ENSTTRP00000008517/1-172 ---------- ---------- ---------- ---------- - bmy_11811T0/1-199 EYYNKRGIHS AIDASQTPDV VFASILAAFS KATCKDLVMF I BACU019522/1-169 ---------- ---------- ---------- ---------- -