KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:20:38 2014 Check: 00 .. Name: ENSTTRP00000014289/1-834 Len: 836 Check: 2955 Weight: 1.00 Name: ENSP00000224756/1-834 Len: 836 Check: 3993 Weight: 1.00 Name: bmy_17952T0/1-555 Len: 836 Check: 442 Weight: 1.00 Name: ENSBTAP00000023416/1-793 Len: 836 Check: 6313 Weight: 1.00 // 1 50 ENSTTRP00000014289/1-834 MEEKTQIKTF LGSKLPKYGT KPVRSTLQPM PNGKPVNLLG TSKSSNAKSY ENSP00000224756/1-834 MEEKTQIKTF LGSKLPKYGT KSVRSTLQPM PNGTPVNLLG TSKNSNVKSY bmy_17952T0/1-555 MEEKTQIKTF LGSKLPKYGT KXVRSTLQPM PNGKPVNLLG TSKSSNAKSY ENSBTAP00000023416/1-793 MEEKTQIKTF LGSKLPKYGT KSVRSTLQPM PNGKPVNLLG TSKSSSVKSY 51 100 ENSTTRP00000014289/1-834 IKNNGSDCSL SHSFNWRTAN KYQFSAQSPE EPNGTQTSHD KEIDPEKHAP ENSP00000224756/1-834 IKNNGSDCPS SHSFNWRKAN KYQLCAQGVE EPNNTQNSHD KIIDPEKRVP bmy_17952T0/1-555 IKNNGSDCSL SHSFNWRTAN KYQFSAQSPE EPNGTQSSHD KEIDPEKHAP ENSBTAP00000023416/1-793 IKNNGSDCSS SHSFNWRTAN KYEFSAQSSE EPNNTQSSHA KVIDPEKITP 101 150 ENSTTRP00000014289/1-834 AQGMFDKNGM KGGLKSISLL TSKLAKTSTM FVSSAEELNQ KSLSGPSNLG ENSP00000224756/1-834 TQGMFDKNGI KGGLKSVSLF TSKLAKPSTM FVSSTEELNQ KSFSGPSNLG bmy_17952T0/1-555 AQGMFDKNGM KGGLKSISLL TSKLAKPSTM FVSSAEELNQ KSLSGPSNLG ENSBTAP00000023416/1-793 TQGVFDKNGM KGGLKNISLL TSKLAKPSTM FVSSTEELNQ KSLSGPSNLG 151 200 ENSTTRP00000014289/1-834 KFTKGTLLGR TSYASVSAPK SQLNGFYGNR SAGSIQRPRA NSCAXXXXXX ENSP00000224756/1-834 KFTKGTLLGR TSYSSINTPK SQLNGFYGNR SAGSMQRPRA NSCATRSSSG bmy_17952T0/1-555 KFTKGTLLGR TSYASVSAPK SQLNGFYGNR SAGSIQRPRA NSCATRSSSG ENSBTAP00000023416/1-793 KFTKGTLLAR TSYASVSAPK SQLNGFYGNR SAGSIQRPRA NSCATRGSSG 201 250 ENSTTRP00000014289/1-834 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXRAADL ENSP00000224756/1-834 ESLAQSPDSS KSINCEKMVR SQSFSHSIQN SFLPPSSITR SHSFNRAVDL bmy_17952T0/1-555 ESLAQSLDNI KSLACEKMVR SQSFSHSIQN SFLPPSSISR SHSFNRAADL ENSBTAP00000023416/1-793 ESLAQSLDNI KSLACEKMVR SQSFSHSIQN SFLPPSSITR SHSFNRAADL 251 300 ENSTTRP00000014289/1-834 TKPYQNQQLP IRVPLRSSML ARNSRQSEVL NGNEHLRYGF NRPYAAGGKK ENSP00000224756/1-834 TKPYQNQQLS IRVPLRSSML TRNSRQPEVL NGNEHLGYGF NRPYAAGGKK bmy_17952T0/1-555 TKPYQNQQLP IRVPLRSSML TRNSRQSEVL NGNEHLGYGF NRPYAAGGKK ENSBTAP00000023416/1-793 TKPYQNQQLP IRVPLRSSML TRNSRQSEVL NGNEHLGFGF NRPYAAGGKK 301 350 ENSTTRP00000014289/1-834 LALPNGPGVT STLGYRMVHP SLLKSGRSPF SGTITVDGNK NSPADTCIEE ENSP00000224756/1-834 LALPNGPGVT STLGYRMVHP SLLKSSRSPF SGTMTVDGNK NSPADTCVEE bmy_17952T0/1-555 LALPNGPGVT STLGYRMVHP SLLKSGRPPF SGTITVDGNK NSLADTCIEE ENSBTAP00000023416/1-793 LALPNGQGVT STL------- ---------- ---------- ---------- 351 400 ENSTTRP00000014289/1-834 DAALVAKDRA KDKDQELIEN DSYITENDQT MKHDTKIRYL GDDVDDISLS ENSP00000224756/1-834 DATVLAKDRA ANKDQELIEN ESYRTKNNQT MKHDAKMRYL SDDVDDISLS bmy_17952T0/1-555 DAALVAKDRA KDKDQELIEN DSYRTENDQT MKHDAKIRYL SDDVDDISLS ENSBTAP00000023416/1-793 ----VAKDRA VDKDQELIEN DSYRIENDQT MKRDAKIRYL SDDVDDISLS 401 450 ENSTTRP00000014289/1-834 SLSSSDKNDL SEDFSDDFID IEDSNRTRVT PEEISLKEEK CENEPPKDIF ENSP00000224756/1-834 SLSSSDKNDL SEDFSDDFID IEDSNRTRIT PEEMSLKEEK HENGPPQDMF bmy_17952T0/1-555 SLSSSDKNDL SEDFSDDFID IEDSNRTRVT PEEISLKEEK CENVPPKDIF ENSBTAP00000023416/1-793 SLSSSDKNDL SEDFSDDFID IEDSNRTRIT PEEISLKEEK YENVPPKDIF 451 500 ENSTTRP00000014289/1-834 DSPKENEKSF SKTDEWIDIS VS--DRSECS KHASGNNLIS PDTDYRAGSS ENSP00000224756/1-834 DSPKENEKAF SKTDEWIDIS VS--DRSECT KHTSGNNLVS PDTDYRAGSS bmy_17952T0/1-555 DSPKENEKSF SKTDEWIDIS VSVEDRSECS KHASGNNLIS PDTDYRAGSS ENSBTAP00000023416/1-793 DSPKENEKSF SKTDEWIDIS VS--DRSECS KHASGNNLIS PDTDYRAGSS 501 550 ENSTTRP00000014289/1-834 FELSPSDSSD GTYMWDEEGL EPIGNVHPVG SYESSEMNSI DILNNLESCD ENSP00000224756/1-834 FELSPSDSSD GTYMWDEEGL EPIGNVHPVG SYESSEMNSI DILNNLESCD bmy_17952T0/1-555 FELSPSDSSD GTYMWDEEGL EPIGNVHPVG SYESSEMNSI ---------- ENSBTAP00000023416/1-793 FELSPSDSSD GTYMWDEEGL EPIGNVHPVG SYESSEMNSI DILNNLESCD 551 600 ENSTTRP00000014289/1-834 LEDDDLMLDV DLPEDAPLEN VECDNMNRFD RSDRNVRQSQ EGFWKRPPQR ENSP00000224756/1-834 LEDDDLMLDV DLPEDAPLEN VECDNMNRFD RPDRNVRQPQ EGFWKRPPQR bmy_17952T0/1-555 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000023416/1-793 LEDDDLMLDV DLPEDTPLEN VECDNMNRFD RSDRNVRQSQ EGFWKRPPQR 601 650 ENSTTRP00000014289/1-834 WSGQEHYHLS HPDHYHHYGK SDLSRGSPYR ESPLGNFESY GGTPFFQAQK ENSP00000224756/1-834 WSGQEHYHLS HPDHYHHHGK SDLSRGSPYR ESPLGHFESY GGMPFFQAQK bmy_17952T0/1-555 ---------- ---------- ---------- ---------- -----F---- ENSBTAP00000023416/1-793 WSGQEHYHLS HPDHYHHHGK SDLSRGSPYR ESPLGHFESY GGTPFFQAQK 651 700 ENSTTRP00000014289/1-834 MFVDVPENTV ILDEMTLRHM VQDCTAVKTQ LLKLKRLLHQ HDESGSLHDV ENSP00000224756/1-834 MFVDVPENTV ILDEMTLRHM VQDCTAVKTQ LLKLKRLLHQ HDGSGSLHDI bmy_17952T0/1-555 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000023416/1-793 MFVDVPENTV ILDEMTLRHM VQDCTAVKTQ LLRLKRLLRQ HDGSGSLHDV 701 750 ENSTTRP00000014289/1-834 QLSLSSSPEP EDGDQIYKNE DLLNEIKQLK DEIKKKDEKI QLLEHQLATR ENSP00000224756/1-834 QLSLPSSPEP EDGDKVYKNE DLLNEIKQLK DEIKKKDEKI QLLELQLATQ bmy_17952T0/1-555 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000023416/1-793 QLSLPSSPEP EDGDQICKNE DLLNEIKQLK EELKKKDEKI QLLEHQLATR 751 800 ENSTTRP00000014289/1-834 CNCHQKSKEE KRTYADKYTQ TPWRRIPXXX XXXXXXXXXX XXXXXXXXXX ENSP00000224756/1-834 HICHQKCKEE KCTYADKYTQ TPWRRIPGGY SAPSFSPWQG SFQGIPRTVP bmy_17952T0/1-555 ---------- ---------- ---------- ----LSEW-- ----LFHELD ENSBTAP00000023416/1-793 CNCHQKSKEE KCTYADKYTQ TPWRRIPGGY SAPSFSPWQG SFQGIPRTVP 801 850 ENSTTRP00000014289/1-834 XXXXXXSSTT AFQQPSQTHR PRPGKTSKAT TYRGPQ ENSP00000224756/1-834 PHRRQTSSTT AFQQPSQTHR SHPGKTNKAT TYRGPQ bmy_17952T0/1-555 TQKK------ ---------- ---------- ------ ENSBTAP00000023416/1-793 PHRRQTSSTT AFQQPSQTHR PHPGKTSKAT TYRGPQ