KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 5  Type: P  Thu May 15 17:20:39 2014  Check: 00 ..

 Name: ENSP00000329213/1-175     Len:    199  Check:  4487  Weight:  1.00
 Name: BACU006324/1-159          Len:    199  Check:  7408  Weight:  1.00
 Name: ENSBTAP00000023435/1-176  Len:    199  Check:  9724  Weight:  1.00
 Name: bmy_20785T0/1-157         Len:    199  Check:  3585  Weight:  1.00
 Name: ENSTTRP00000013526/1-175  Len:    199  Check:  7889  Weight:  1.00

//


                          1                                                   50
ENSP00000329213/1-175     MPKRSCPFAD VAPLQLKVRV SQRELSRGVC AERYSQEVFE KTKRLLFLGA 
BACU006324/1-159          ---------- ---------- ---------- ---------E KTTQLLFRGA 
ENSBTAP00000023435/1-176  MPKRGYPFAD AAPLQLKVRV GQRELSRGVC AERLTREIFE KTMQLLFRGA 
bmy_20785T0/1-157         MPKRGCPFAD AAPLQLKVRV GRRELSRGVC AERLTREIFE KTTQLLFRGA 
ENSTTRP00000013526/1-175  MPKRGCPFAD AAPLQLKVRV GRRELSRGVC AERLTREIFE KTTQLLFRGA 


                          51                                                 100
ENSP00000329213/1-175     QAYLDHVWDE GCAVVHLPES PKPGPTGAPR AARGQMLIGP DGRLIRSLGQ 
BACU006324/1-159          QACMDPAWEE GCAIVDTPES PKPGPTEAPR AARGQMLIGP DGRLTRSRAQ 
ENSBTAP00000023435/1-176  QACMDPAWEE GCAIVHTPES PRPGPTEAPR AARGQMLIGP DGRLTRSQAQ 
bmy_20785T0/1-157         QACMDPAWEE GCAIVDTPES PKPGPTEAPR AARGQMLIGP DGRLTRSRAQ 
ENSTTRP00000013526/1-175  QACMDPAWEE ACAIVHTPES PKPGPTEAPR AARGQMLIGP DGRLTRSRAQ 


                          101                                                150
ENSP00000329213/1-175     ASEADPSGVA SIACSSCVRA VDGKAVCGQC ERALCGQCVR TCWGC----- 
BACU006324/1-159          ASEADPAMAA AGACSSCVRA VDGKAACGQC ERALCGRCVR TCCGCVLPSP 
ENSBTAP00000023435/1-176  ASEADPAGVA SRACSSCVRA VDGKAACGQC ERALCARCVR TCCSC----- 
bmy_20785T0/1-157         AAEADPAMAA SGGCSSCVRA VDGKAACGQC ERALCGRCVR TCCGC----- 
ENSTTRP00000013526/1-175  ASEADPAMAA SGACSSCVRA VDGKAACGQC ERALCGRCVR TCCGC----- 


                          151                                                200
ENSP00000329213/1-175     ---------- -----GSVA- --CTLCGLVD C-SDMYEKVL CTSCAMFET 
BACU006324/1-159          FSVSPDPTLP ELLPLGAIRG QSTLLHTWPT C-SDLHEKVL CASCAMFEA 
ENSBTAP00000023435/1-176  ---------- -----GAVA- --CALCALVD YGGDLHEKVL CSSCAAFEA 
bmy_20785T0/1-157         ---------- -----GAVA- --CALCALVE ---------- --------- 
ENSTTRP00000013526/1-175  ---------- -----GAVA- --CTLCALVD C-SDLHEKVL CASCTMFEA