KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:20:45 2014 Check: 00 .. Name: ENSP00000263026/1-725 Len: 728 Check: 4045 Weight: 1.00 Name: ENSBTAP00000023487/1-723 Len: 728 Check: 4019 Weight: 1.00 Name: ENSTTRP00000009968/1-722 Len: 728 Check: 8389 Weight: 1.00 Name: bmy_12039T0/1-713 Len: 728 Check: 4420 Weight: 1.00 Name: BACU013836/1-722 Len: 728 Check: 6394 Weight: 1.00 // 1 50 ENSP00000263026/1-725 MADEDLIFRL EGVDGGQSPR AGHDGDSDGD S-DDEEGYFI CPITDDPSSN ENSBTAP00000023487/1-723 MAEEDLIFRL EGVDGRPASR A---GDSDTD SDDDEEGYFI CSITDDPGAH ENSTTRP00000009968/1-722 MAEEDLIFRL EGVDGGPTSR A---GDSDAD S-DGEEGYFI CPITDDPGAH bmy_12039T0/1-713 MAEEDLIFRL EGVDGGPTSR A---GDSDAD S-DGEEGYFI CPITEDPGAH BACU013836/1-722 MAEEDLIFRL EGVDGGPTSR A---GDSDAD S-DGEDGYFI CPITEDPGAH 51 100 ENSP00000263026/1-725 QNVNSKVNKY YSNLTKSERY SSSGSPANSF HFKEAWKHAI QKAKHMPDPW ENSBTAP00000023487/1-723 QNVNFKVNNC HSNLAKSERY GSSGSPAGSF HFKEAWKHAI EKAKHMPDPW ENSTTRP00000009968/1-722 QNVNSKVNNY YSNLAKSERY GSSGSPAISF HFKEAWKHAI EKAKHMPDPW bmy_12039T0/1-713 QNVNSKVNNY YSNLAKSERY GSSGSPAISF HFKEAWKHAI EKAKHMPDPW BACU013836/1-722 QNVNSKVNNY YSNLAKSERY GSSGSPAISF HFKEAWKHAI EKAKHMPDPW 101 150 ENSP00000263026/1-725 AEFHLEDIAT ERATRHRYNA VTGEWLDDEV LIKMASQPFG RGAMRECFRT ENSBTAP00000023487/1-723 AEFHLEDVAT ECATRHRYNA VTGEWVEDEV LIKMASQPFG RGAMRECFRT ENSTTRP00000009968/1-722 AEFHLEDIAT ECATRHXXXX XXXXXXXXXX XXXXXXXPFG RGAMRECFRT bmy_12039T0/1-713 AEFHLEDIAT ECATRHRYNA VTGEWLEDEV LIKMASQPFG RGAMRECFRT BACU013836/1-722 AEFHLEDIAT ECATRHRYNA VTGEWLEDEI VIKMASQPFG RGAMRECFRT 151 200 ENSP00000263026/1-725 KKLSNFLHAQ QWKGASNYVA KRYIEPVDRD VYFEDVRLQM EAKLWGEEYN ENSBTAP00000023487/1-723 KKLSNFLHTQ QWKGASNYVA KRYIESVDRD VYFEDVRLQM EAKLWGEEYN ENSTTRP00000009968/1-722 KKLSNFLHTQ QWKGASNYVA KRYIESVDRD VYFEDVRLQM EAKLWGEEYN bmy_12039T0/1-713 KKLSNFLHTQ QWKGASNYVA KRYIESVDRD VYFDDVRLQM EAKLWGEEYN BACU013836/1-722 KKLSNFLHTQ QWKGASNYVA KRYIESVDRD VYFEDVRLQM EAKLWGEEYN 201 250 ENSP00000263026/1-725 RHKPPKQVDI MQMCIIELKD RPGKPLFHLE HYIEGKYIKY NSNSGFVRDD ENSBTAP00000023487/1-723 RHKPPKQVDI MQMCIIELKE RPGRPLFHLE HYIEGKYIKY NSNSGFVRDD ENSTTRP00000009968/1-722 RHKPPKQVDI MQMCIIELKE RQGRPLFHLE HYIEGKYIKY NSNSGFVRDD bmy_12039T0/1-713 RHKPPKQVDI MQMCVIELKE RLGRPLFHLE HYIEGKYIKY NSNSGFVRDD BACU013836/1-722 RHKPPKQVDI MQMCVIELKE RLGRPLFHLE HYIEGKYIKY NSNSGFVRDD 251 300 ENSP00000263026/1-725 NIRLTPQAFS HFTFERSGHQ LIVVDIQGVG DLYTDPQIHT ETGTDFGDGN ENSBTAP00000023487/1-723 NVRLTPQAFS HFTFERSGHQ LIVVDIQGVG DLYTDPQIHT ERGTDFGDGN ENSTTRP00000009968/1-722 NMRLTPQAFS HFTFERSGHQ LIVVDVQGVG DLYTDPQIHT ERGTDFGDGN bmy_12039T0/1-713 NMRLTPQAFS HFTFERSGHQ LIVVDVQGVG DLYTDPQIHT ERGTDFGDGN BACU013836/1-722 NMRLTPQAFS HFTFERSGHQ LIVVDVQGVG DLYTDPQIHT ERGTDFGDGN 301 350 ENSP00000263026/1-725 LGVRGMALFF YSHACNRICE SMGLAPFDLS PRERDAVNQN TKLLQSAKTI ENSBTAP00000023487/1-723 LGVRGMALFF HSHACNRICK SMGLTPFDLS PRERDAVNQN TKLLQSAKTI ENSTTRP00000009968/1-722 LGVRGMALFF HSHACNRICK SMGLTPFDLS PRERDAVTQN IKLLQSAQTI bmy_12039T0/1-713 LGVRGMALFF HSHACNRICK SMGLAPFDLS PRERDAVTQN TKLLQSAQTI BACU013836/1-722 LGVRGMALFF NSHACNRICK SMGLAPFDLS PRERDAVTQN TKLLQSAQTT 351 400 ENSP00000263026/1-725 LRGTEEKCGS PQVRTLSGSR PPLLRPLSEN SGDENMSDVT FDSLPSSPSS ENSBTAP00000023487/1-723 LRGTEEKCGS PRVRTLSGSR PPLLLRLSEN SGDDNMSDVT FDSLPSSPSS ENSTTRP00000009968/1-722 LRGTEEKCGS PRVRTLSGSR PPLLLRLSEN SGDENMSDIT FDSLPSSPSS bmy_12039T0/1-713 LRGTEEKCGS PRVRTLSGSR PPLLLRLSEN SGDENMSDIT FDSLPSSPSS BACU013836/1-722 LRGTEEKCGS PRVRTLSGSR PPLLLRLSEN SGDENMSDIT FDSLPSSPSS 401 450 ENSP00000263026/1-725 ATPHSQKLDH LHWPVFSDLD NMASRDHDHL DNHRESENSG DSGYPSEKRG ENSBTAP00000023487/1-723 ATPHSQKLEH LHWPVFSDLD NMAPRDQDPL DNHRDSENGG DSGYPSEKRG ENSTTRP00000009968/1-722 ATPHSQKLDH LHWPVFSDLD NLAPRDHDPL DNHRDSENSG DSGYPSEKRS bmy_12039T0/1-713 ATPHSQKLDH LHWPVFSDLD NVAPRDHDPL DNHRDSENSG DSGYPSEKRG BACU013836/1-722 ATPHSQKLDH LHWPVFSDLD NVAPRDHDPL DNHRDSENSG DSGYPSEKRG 451 500 ENSP00000263026/1-725 ELDDPEPREH GHSYSNRKYE SDEDSLGSSG RVCVEKWNLL NSSRLHLPRA ENSBTAP00000023487/1-723 DLDDPEPREH GHSNGNRRYE SDEDSLGSSG RVCVEKWNLF NSSRLHLPRP ENSTTRP00000009968/1-722 ELDDPEPREH GHSNGNRRYE SDEDSLGSSG RVCVEKWNLL NSSRLHLSRP bmy_12039T0/1-713 ELDDPEPREH GHSNSNRRYE SDEDSLGSAG RVCVEKWNLL NSSRLHLPRP BACU013836/1-722 ELDDPEPREH GHSNSNRRYE SDEDSLGSSG RVCVEKWNLL NSSRLHLPRP 501 550 ENSP00000263026/1-725 SAVALEVQRL NALDLEKKIG KSILGKVHLA MVRYHEGGRF CEKGEEWDQE ENSBTAP00000023487/1-723 SAVALEVQRL NALDLEKKIG KSILGKVHLA MVRYHEAGRF CEKDEEWDRE ENSTTRP00000009968/1-722 SAVALEVQRL NALDLEKRIG KSILGKVHLA MVRYHEGGRF CKKDEEWDRA bmy_12039T0/1-713 SAVALEVQRL NALDLEKRIG KSILGKVHLA MVRYHEGGRF CEKDEEWDRE BACU013836/1-722 SAVALEVQRL NALDLEKRIG KSILGKVHLA MVRYHEGGRF CEKDEEWDRE 551 600 ENSP00000263026/1-725 SAVFHLEHAA NLGELEAIVG LGLMYSQLPH HILADVSLKE TEENKTKGFD ENSBTAP00000023487/1-723 SAVFHLEHAA DLGELEAIVG LGLMYSQLPH HILADVSLKE TEESKTKGFD ENSTTRP00000009968/1-722 SAIFHLEQAA DLGELEAIAG LGLMYSQLPH HILADVSLKE TEENKTKGFN bmy_12039T0/1-713 SAIFHLEHAA DLGELEAIVG LGLMYSQLPH YILADVSLKE TEENKTKGFD BACU013836/1-722 SAIFHLEHAA DLGELEAIVG LGLMYSQLPH HILADVSLKE TEENKTKGFD 601 650 ENSP00000263026/1-725 YLLKAAEAGD RQSMILVARA FDSGQNLSPD RCQDWLEALH WYNTALEMTD ENSBTAP00000023487/1-723 YLLKAAEAGD RQCMILVARA FDTGQNLSPD RSQSWPEALH WYNTALETTD ENSTTRP00000009968/1-722 YLLKAAEAGD RQSMILVARA FDTGQNLSPD RSQSWPEALL WYNTALETTD bmy_12039T0/1-713 YLLKAAEAGD RQSMILVARA FDTGQNLSPD RSQSWPEALL WYNTALETTD BACU013836/1-722 YLLKAAEAGD RQSMILVARA FDTGQNLSPD RSQSWPEALL WYNTALETTD 651 700 ENSP00000263026/1-725 CDEGGEYDGM QDEPRYMMLA REAEMLFTGG YGLEKDPQRS G--DLYTQAA ENSBTAP00000023487/1-723 CDEGGEYDGM QDEPRYMLLA REAEMLFTGG CGLEKDPQRS G--DLYTQAA ENSTTRP00000009968/1-722 CDEGGEYDGM HDEPRYLLLA REAEMLFTGG CGLEKNPQRS G--DLYTKAA bmy_12039T0/1-713 CDEGGEYDGM QDEPRYLLLA REAEMLFTGG CGLEKNPQRS AHPDANGVMV BACU013836/1-722 CDEGGEYDGM QDEPRYLLLA REAEMLFTGG CGLEKNPQRS G--DLYTKAA 701 750 ENSP00000263026/1-725 EAAMEAMKGR LANQYYQKAE EAWAQMEE ENSBTAP00000023487/1-723 EAAMEAMKGR LANQYYEKAE EAWAQMEE ENSTTRP00000009968/1-722 EAAMEAMKGR LANQYYEKAE EAWAQMEE bmy_12039T0/1-713 QCSVEVFTSS DPAIFLE--- -------- BACU013836/1-722 EAAMEAMKGR LANQYYEKAE EAWAQMEE