KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:20:54 2014 Check: 00 .. Name: ENSP00000377508/1-745 Len: 1146 Check: 7486 Weight: 1.00 Name: ENSBTAP00000023522/1-745 Len: 1146 Check: 8097 Weight: 1.00 Name: ENSTTRP00000006241/1-744 Len: 1146 Check: 8921 Weight: 1.00 Name: bmy_16705T0/1-727 Len: 1146 Check: 5248 Weight: 1.00 Name: BACU007066/1-1145 Len: 1146 Check: 2724 Weight: 1.00 // 1 50 ENSP00000377508/1-745 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000023522/1-745 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006241/1-744 ---------- ---------- ---------- ---------- ---------- bmy_16705T0/1-727 ---------- ---------- ---------- ---------- ---------- BACU007066/1-1145 MVPYPPRQLL RDFQSRLPYQ YLHYAQFKAN RLEKAVAAAY TFLQRNPKHE 51 100 ENSP00000377508/1-745 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000023522/1-745 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006241/1-744 ---------- ---------- ---------- ---------- ---------- bmy_16705T0/1-727 ---------- ---------- ---------- ---------- ---------- BACU007066/1-1145 LTAKYLNYYR GLLDAADEPL TDLEAQPYEA VFLRAVKLYN SGDFRSSTED 101 150 ENSP00000377508/1-745 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000023522/1-745 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006241/1-744 ---------- ---------- ---------- ---------- ---------- bmy_16705T0/1-727 ---------- ---------- ---------- ---------- ---------- BACU007066/1-1145 MERALAEYMA VFARCLAGCE GAHEQVDFKD FYPAIADLFA ESLQCKVDCE 151 200 ENSP00000377508/1-745 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000023522/1-745 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006241/1-744 ---------- ---------- ---------- ---------- ---------- bmy_16705T0/1-727 ---------- ---------- ---------- ---------- ---------- BACU007066/1-1145 ANLTPNVGGY FVEKFVATMY HYLQFAYYKL NDVRHAARSA ASYMLFDPED 201 250 ENSP00000377508/1-745 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000023522/1-745 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006241/1-744 ---------- ---------- ---------- ---------- ---------- bmy_16705T0/1-727 ---------- ---------- ---------- ---------- ---------- BACU007066/1-1145 NVMQQNLVYY RFHRARWGLE EEDFQPREEA MLYHNQTAEL RELLEFAHMY 251 300 ENSP00000377508/1-745 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000023522/1-745 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006241/1-744 ---------- ---------- ---------- ---------- ---------- bmy_16705T0/1-727 ---------- ---------- ---------- ---------- ---------- BACU007066/1-1145 LQSDDEMELK ETEAPTEPEE PPSDAEFEGE GDYEESIYAD WWQEPDAKGD 301 350 ENSP00000377508/1-745 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000023522/1-745 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006241/1-744 ---------- ---------- ---------- ---------- ---------- bmy_16705T0/1-727 ---------- ---------- ---------- ---------- ---------- BACU007066/1-1145 EAEAGGYAVA ASPKSSQVLT RIPALAQALP FQWVLLSFSI VGSRQPLPPL 351 400 ENSP00000377508/1-745 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000023522/1-745 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006241/1-744 ---------- ---------- ---------- ---------- ---------- bmy_16705T0/1-727 ---------- ---------- ---------- ---------- ---------- BACU007066/1-1145 SDASVSPLPG QLPKPGAPVD GGGSAGPQKL LEVLNAFSCS GGFGLGQQAA 401 450 ENSP00000377508/1-745 -MEVMNLMEQ PIKVTEWQQT YTYDSGIHSG ANTCVPSVSS KGIMEEDEAC ENSBTAP00000023522/1-745 -MEVMNLIEQ PIKVTEWQQT YTYDSGIHSG ANTCVPSLSS KGLIEEDEAC ENSTTRP00000006241/1-744 -MDVMNLIEQ PIKVTEWQQT YTYDSGIHSG VNTCVPSVSS KGVTEDDEAC bmy_16705T0/1-727 -MDVMNLIEQ PIKVTEWQQT YTYDSGIHSG VNTCVPSVSS KGVAEEEEAC BACU007066/1-1145 TMDVMNLIEQ PIKVTEWQQT YTYDSGIHSG VNTCVPSVSS KGITEEDEAC 451 500 ENSP00000377508/1-745 GRQYTLKKTT TYTQGVPPSQ GDLEYQMSTT ARAKRVREAM CPGVSGEDSS ENSBTAP00000023522/1-745 GRQYTLKKTT TYTQSVPPGQ GDLEYQMSTT ARAKRVREAM CPGVTGEDSS ENSTTRP00000006241/1-744 ERQYMLKKTT TYTQAVPQSQ GDLDYQMSTT GRAQRVREAI CPGVTREDSC bmy_16705T0/1-727 GRQYMLKKTT TYTQAVPQGQ GDVDYQMSTT ARAKRVREAM CPGVTGEDSS BACU007066/1-1145 GRQYMLKKTT TYTQAVPQSQ GDLDYQMSTT ARAKRVREAM CPGVTGEDSS 501 550 ENSP00000377508/1-745 LLLATQVEGQ ATNLQRLAEP SQLLKSAIVH LINYQDDAEL ATRALPELTK ENSBTAP00000023522/1-745 LLLTTQVEGQ TTNLQRLAEP SQLLKSAIVH LINYQDDAEL ATRALPELTK ENSTTRP00000006241/1-744 -LLATQVEGQ TTNLQRLAEP SQLLKSAIVH LINYQDDAEL ATRALPELTK bmy_16705T0/1-727 -LLATQVEGQ TTNLQRLAEP SQLLKSAIVH LINYQDDAEL ATRALPELTK BACU007066/1-1145 -LLVTQVEGQ TTNLQRLAEP SQLLKSAIVH LINYQDDAEL ATRALPELTK 551 600 ENSP00000377508/1-745 LLNDEDPVVV TKAAMIVNQL SKKEASRRAL MGSPQLVAAV VRTMQNTSDL ENSBTAP00000023522/1-745 LLNDEDPVVV TKAAMIVNQL SKKEASRRAL MGSPQLVAAV VRTMQNTSDL ENSTTRP00000006241/1-744 LLNDEDPVVV TKAAMIVNQL SKKEASRRAL MGSPQLVAAV VRAMQNTSDL bmy_16705T0/1-727 LLNDEDPVVV TKAAMIVNQL SKKEASRRAL MGSPQLVAAV VRTMQNTSDL BACU007066/1-1145 LLNDEDPVVV TKAAMIVNQL SKKEASRRAL MGSPQLVAAV VRTMQNTSDL 601 650 ENSP00000377508/1-745 DTARCTTSIL HNLSHHREGL LAIFKSGGIP ALVRMLSSPV ESVLFYAITT ENSBTAP00000023522/1-745 DTARCTTSIL HNLSHHREGL LAIFKSGGIP ALVRMLSSPV ESVLFYAITT ENSTTRP00000006241/1-744 DTARCTTSIL HNLSHHREGL LAIFKSGGIP ALVRMLSSPV ESVLFYAITT bmy_16705T0/1-727 DTARCTTSIL HNLSHHREGL LAIFKSGGIP ALVRMLSSPV ESVLFYAITT BACU007066/1-1145 DTARCTTSIL HNLSHHREGL LAIFKSGGIP ALVRMLSSPV ESVLFYAITT 651 700 ENSP00000377508/1-745 LHNLLLYQEG AKMAVRLADG LQKMVPLLNK NNPKFLAITT DCLQLLAYGN ENSBTAP00000023522/1-745 LHNLLLYQEG AKMAVRLADG LQKMVPLLNK NNPKFLAITT DCLQLLAYGN ENSTTRP00000006241/1-744 LHNLLLYQEG AKMAVRLADG LQKMVPLLNK NNPKFLAITT DCLQLLAYGN bmy_16705T0/1-727 LHNLLLYQEG AKMAVRLADG LQKMVPLLNK NNPKFLAITT DCLQLLAYGN BACU007066/1-1145 LHNLLLYQEG AKMAVRLADG LQKMVPLLNK NNPKFLAITT DCLQLLAYGN 701 750 ENSP00000377508/1-745 QESKLIILAN GGPQALVQIM RNYSYEKLLW TTSRVLKVLS VCPSNKPAIV ENSBTAP00000023522/1-745 QESKLIILAN GGPQALVQIM RNYSYEKLLW TTSRVLKVLS VCPSNKPAIV ENSTTRP00000006241/1-744 QESKLIILAN GGPQALVHIM RNYSYEKLLW TTSRVLKVLS VCPSNKPAIV bmy_16705T0/1-727 QESKLIILAN GGPQALVHIM RNYSYEKLLW TTSRVLKVLS VCPSNKPAIV BACU007066/1-1145 QESKLIILAN GGPQALVHIM RNYSYEKLLW TTSRVLKVLS VCPSNKPAIV 751 800 ENSP00000377508/1-745 EAGGMQALGK HLTSNSPRLV QNCLWTLRNL SDVATKQEGL ESVLKILVNQ ENSBTAP00000023522/1-745 EAGGMQALGK HLTSNSPRLV QNCLWTLRNL SDVATKQEGL ESVLKILVNQ ENSTTRP00000006241/1-744 EAGGMQALGK HLTSNSPRLV QNCLWTLRNL SDVATKQEGL ESVLKILVNQ bmy_16705T0/1-727 EAGGMQALGR HLTSNSPRLV QNCLWTLRNL SDVATKQEGL ESVLKILVNQ BACU007066/1-1145 EAGGMQALGK HLTSNSPRLV QNCLWTLRNL SDVATKQEGL ESVLKILVNQ 801 850 ENSP00000377508/1-745 LSVDDVNVLT CATGTLSNLT CNNSKNKTLV TQNSGVEALI HAILRAGDKD ENSBTAP00000023522/1-745 LSVDDVNVLT CATGTLSNLT CNNSKNKTLV TQNSGVEALI HAILRAGDKD ENSTTRP00000006241/1-744 LSVDDVNVLT CATGTLSNLT CNNSKNKTLV TQNSGVEALI HAILCAGDKD bmy_16705T0/1-727 LSVEDVNVLT CATGTLSNLT CNNSKNKTLV TQNSGVEALI HAILCAGDKD BACU007066/1-1145 LSVDDVNVLT CATGTLSNLT CNNSKNKTLV TQNSGVEALI HAILCAGDKD 851 900 ENSP00000377508/1-745 DITEPAVCAL RHLTSRHPEA EMAQNSVRLN YGIPAIVKLL NQPNQWPLVK ENSBTAP00000023522/1-745 DITEPAVCAL RHLTSRHPEA EMAQNSVRLN YGIPAIVKLL NQPNQWPLVK ENSTTRP00000006241/1-744 DITEPAICAL RHLTSRHPEA EMAQNSVRLN YGIPAIVKLL NQPNQWPLVK bmy_16705T0/1-727 DITEPAICAL RHLTSRHPEA EMAQNSVRLN YGIPAIVKLL NQPNQWPLVK BACU007066/1-1145 DITEPAICAL RHLTSRHPEA EMAQNSVRLN YGIPAIVKLL NQPNQWPLVK 901 950 ENSP00000377508/1-745 ATIGLIRNLA LCPANHAPLQ EAAVIPRLVQ LLVKAHQDAQ RHVAAGTQQP ENSBTAP00000023522/1-745 ATIGLIRNLA LCPANHAPLQ EAAVIPRLVQ LLVKAHQDAQ RHVAAGTQQP ENSTTRP00000006241/1-744 ATIGLIRNLA LCPANHAPLQ EAAVIPRLVQ LLVKAHQDAQ RHMAAGTQQP bmy_16705T0/1-727 ATIGLIRNLA LCPANHAPLQ EAAVIPRLVQ LLVKAHQDAQ RHMAAGTQQP BACU007066/1-1145 ATIGLIRNLA LCPANHAPLQ EAAVIPRLVQ LLVKAHQDAQ RHMAAGTQQP 951 1000 ENSP00000377508/1-745 YTDGVRMEEI VEGCTGALHI LARDPMNRME IFRLNTIPLF VQLLYSSVEN ENSBTAP00000023522/1-745 YTDGVRMEEI VEGCTGALHI LARDPMNRME IFRLNTIPLF VQLLYSSVEN ENSTTRP00000006241/1-744 YTDGVRMEEI VEGCTGALHI LARDPMNRME IFRLNTIPLF VQLLYSSVEN bmy_16705T0/1-727 FTDGVRMEEI VEGCTGALHI LARDPMNRME IFRLNTIPLF VQLLYSSVEN BACU007066/1-1145 YTDGVRMEEI VEGCTGALHI LARDPMNRME IFRLNTIPLF VQLLYSSVEN 1001 1050 ENSP00000377508/1-745 IQRVAAGVLC ELAQDKEAAD AIDAEGASAP LMELLHSRNE GTATYAAAVL ENSBTAP00000023522/1-745 IQRVAAGVLC ELAQDKEAAD AIDAEGASAP LMELLHSRNE GTATYAAAVL ENSTTRP00000006241/1-744 IQRVATGVLC ELAQDKEAAD VIDAEGASAP LMELLHSHNE GTATYDGAVL bmy_16705T0/1-727 IQRVAAGVLC ELAQDKEAAD TIDAEGASAP LMELLHSHNE GTATYAAAVL BACU007066/1-1145 IQRVAAGVLC ELAQDKEAAD TIDAEGASAP LMELLHSHNE GTATYAAAVL 1051 1100 ENSP00000377508/1-745 FRISEDKNPD YRKRVSVELT NSLFKHDPAA WEAAQSMIPI NEPYGDDMDA ENSBTAP00000023522/1-745 FRISEDKNPD YRKRVSVELT NSLFKHDPAA WEAAQSMIPM NEPYADDMDA ENSTTRP00000006241/1-744 FRISEDKNPD YRKRVSVELT NSLFKHDPAA WEAAQSMIPI NEPYADDMDA bmy_16705T0/1-727 FRISEDKNPD YRKRVS---- ---------- ---AQSMIPI NEPYADDMDA BACU007066/1-1145 FRISEDKNPD YRKRVSVELT NSLFKHDPAA WEAAQSMIPI NEPYADDMDA 1101 1150 ENSP00000377508/1-745 TYRPMYSSDV PLDPLEMHMD MDGDYPIDTY SDGLRPPYPT ADHMLA ENSBTAP00000023522/1-745 TYRPMYSSDV PMDPLEMHMD MDGDYPIDTY SDGLRPPYAT ADHMLA ENSTTRP00000006241/1-744 TYRPMYSSDV PLDPLEMHMD MDGDYPIDTY SDGLRPPYPT ADHMLA bmy_16705T0/1-727 TYRPMYSSDM LLDPLEMHMD MDGDYPIDTY SDGFRPAYPT ADHMLA BACU007066/1-1145 TYRPMYSSDM PLDPLEMHMD MDGDYPIDTY SDGLRPPYPT ADHMLA