KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:20:55 2014 Check: 00 .. Name: ENSBTAP00000023525/1-463 Len: 463 Check: 3286 Weight: 1.00 Name: ENSP00000352956/1-439 Len: 463 Check: 3462 Weight: 1.00 Name: bmy_13937T0/1-317 Len: 463 Check: 8602 Weight: 1.00 Name: ENSTTRP00000001416/1-438 Len: 463 Check: 6588 Weight: 1.00 Name: BACU008637/1-405 Len: 463 Check: 7888 Weight: 1.00 // 1 50 ENSBTAP00000023525/1-463 MASDDFDIVI EAMLEAPYKK EEDGQQRKEA KKDSPSNTTN STSSIDTRSC ENSP00000352956/1-439 MASDDFDIVI EAMLEAPYKK EEDEQQRKEV KKDYPSNTTS STS---NSGN bmy_13937T0/1-317 MASDDFDIVI EAMLEAPYKK EEDEQQTNEV EKESPSNTTN STSRTGSSGS ENSTTRP00000001416/1-438 MASDDFDIVI EAMLEAPYKK EEDEQQTNEV EKESPSNTTN STSCTGSSGS BACU008637/1-405 MASDDFDIVI EAMLEAPYKK EEDEQQTNEV EKESPSNTTN STSRTGSSGS 51 100 ENSBTAP00000023525/1-463 GTDGSSVTDG TSAANGNGTS GEASKKKRSR SHSKSRERKR SRSRDRDRHR ENSP00000352956/1-439 ETSGSS---- --------TI GETSKKKRSR SHNKSRDRKR SRSRDRDRYR bmy_13937T0/1-317 GTSGSS---- --------AS GEASKKKRSR SHSKSKDRKR SRS--RDRHR ENSTTRP00000001416/1-438 GTSGSS---- --------AS GEAGRKKRSR SHSKSRDRKR SRS--RDRHR BACU008637/1-405 GTSGSS---- --------AS GEASKKKRSR SHSKSRDRKR SRS--RDRHR 101 150 ENSBTAP00000023525/1-463 RKNSRSRSRD RQRRHRSRSW DRRHSSESRS RDWRREDRVH YRSPPLAAGR ENSP00000352956/1-439 RRNSRSRSPG RQCRHRSRSW DRRHGSESRS RDHRREDRVH YRSPPLATGY bmy_13937T0/1-317 RRSSRSRSRD RQRRHRSRSW DRRHSSESRS RDRRREDRVR YRSPPLATGR ENSTTRP00000001416/1-438 RRSSRSRSRD RQRRHRSRSW ERRHSSESRS RDRRREDRVR YRSPPLATGR BACU008637/1-405 RRSSRSRSRD RQRRHRSRSW DRRHSSESRS RDRRHEDRVR YRSPPLATGR 151 200 ENSBTAP00000023525/1-463 RYGHSKSPHF REKSPVREPV DNLSPEERDA RTVFCMQLAA RIRPRDLEDF ENSP00000352956/1-439 RYGHSKSPHF REKSPVREPV DNLSPEERDA RTVFCMQLAA RIRPRDLEDF bmy_13937T0/1-317 RYGHSKSPHF REKSPVREPV DNLSPEERDA RTVFCMQLAA RIRPRDLEDF ENSTTRP00000001416/1-438 RYGHSKSPH- -SGSPVREPV DNLSPEERDA RTVFCMQLAA RIRPRDLEDF BACU008637/1-405 RYGHSKSPHF REKSPVREPV DNLSPEERDA RTVFCMQLAA RIRPRDLEDF 201 250 ENSBTAP00000023525/1-463 FSAVGKVRDV RIISDRNSRR SKGIAYVEFC EIQSVPLAIG LTGQRLLGVP ENSP00000352956/1-439 FSAVGKVRDV RIISDRNSRR SKGIAYVEFC EIQSVPLAIG LTGQRLLGVP bmy_13937T0/1-317 FSAVGKVRDV RIISDRNSRR SKGIAYVEFC EIQSVPLAIG LTGQRLLGVP ENSTTRP00000001416/1-438 FSAVGKVRDV RIISDRNSRR SKGIAYVEFC EIQSVPLAIG LTGQRLLGVP BACU008637/1-405 FSAVGKVRDV RIISDRNSRR SKGIAYVEFC EIQSVPLAIG LTGQRLLGVP 251 300 ENSBTAP00000023525/1-463 IIVQASQAEK NRLAAMANNL QKGSGGPVRL YVGSLHCNIT EDMLRGILEP ENSP00000352956/1-439 IIVQASQAEK NRLAAMANNL QKGNGGPMRL YVGSLHFNIT EDMLRGIFEP bmy_13937T0/1-317 IIVQASQAEK NRLAAMANNL QKGSGGPMRL FVGSLHFNIT EDMLRGIFEP ENSTTRP00000001416/1-438 IIVQASQAEK NRLAAMANNL QKGSGGPMRL YVGSLHFNIT EDMLRGIFEP BACU008637/1-405 IIVQASQAEK NRLAAMANNL QKGSGGPMRL FVGSLHFNIT EDMLRGIFEP 301 350 ENSBTAP00000023525/1-463 FGKIDNIVLM KDSETGRSKG YGFITFSDSE CARRALEQLN GFELAGRPMR ENSP00000352956/1-439 FGKIDNIVLM KDSDTGRSKG YGFITFSDSE CARRALEQLN GFELAGRPMR bmy_13937T0/1-317 FGKIDNIVLM KDSDTGRSKG YGFITVNTLD T--------- ---------- ENSTTRP00000001416/1-438 FGKIDNIVLM KDSDTGRSKG YGFITFSDSE CARRALEQLN GFELAGRPMR BACU008637/1-405 FGKIDNIVLM KDSDTGRSKG YGFITFSDSE CARRALEQLN GFELAGRPMR 351 400 ENSBTAP00000023525/1-463 IGHVTERPDG GTDITFPDGD QELDLGSAGG HLQLMAKLAE GSGIQLPTTT ENSP00000352956/1-439 VGHVTERLDG GTDITFPDGD QELDLGSAGG RFQLMAKLAE GAGIQLPSTA bmy_13937T0/1-317 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001416/1-438 VGHVTERLDG GTDITFPDGD QDLDLGSAGG RLQLMAKLAE GSGIQLPTT- BACU008637/1-405 VGHVTERLDG GTDITFPDGD QELDLGSAGG RLQLMAKLAE ---------- 401 450 ENSBTAP00000023525/1-463 AAAAAVAQAA AAQAAALQLN GADPLGALNP AALTALSPAL NLASQAIASQ ENSP00000352956/1-439 AAAA----AA AAQAAALQLN GAVPLGALNP AALTALSPAL NL-----ASQ bmy_13937T0/1-317 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001416/1-438 --------AA VAQAAALQLN GAVPLGALNP AALTALSPAL NLASQAIASQ BACU008637/1-405 ---------- ---------- ---------- ----ALSPAL NLASQAIASQ 451 500 ENSBTAP00000023525/1-463 CFQLSSLFTP QTM ENSP00000352956/1-439 CFQLSSLFTP QTM bmy_13937T0/1-317 ---------- --- ENSTTRP00000001416/1-438 CFQLSSLFTR QTM BACU008637/1-405 CFQLSSLFTP QTM