KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:20:56 2014 Check: 00 .. Name: ENSP00000311121/1-256 Len: 261 Check: 4389 Weight: 1.00 Name: ENSTTRP00000013832/1-221 Len: 261 Check: 2079 Weight: 1.00 Name: ENSBTAP00000023541/1-261 Len: 261 Check: 4717 Weight: 1.00 Name: bmy_19368T0/1-220 Len: 261 Check: 6749 Weight: 1.00 Name: BACU017850/1-250 Len: 261 Check: 2038 Weight: 1.00 // 1 50 ENSP00000311121/1-256 MASRYDRAIT VFSPDGHLFQ VEYAQEAVKK GSTAVGIRGT NIVVLGVEKK ENSTTRP00000013832/1-221 ---------- ---------- ---------- ----VGIRGA DIVVLGVEKK ENSBTAP00000023541/1-261 MASRYDRAIT VFSPDGHLFQ VEYAQEAVKK GSTAVGIRGT NIVVLGVEKK bmy_19368T0/1-220 ---------- ---------- ---------- MTQQVGIRGT DIVVLGVEKK BACU017850/1-250 MASQYDRAIT VFSPDGHLFQ VEYAQEAVKK GSTVVGIRGT DIVVLGVEKK 51 100 ENSP00000311121/1-256 SVAKLQDERT VRKICALDDH VCMAFA---- -VLTIFIGLT ADARVVINRA ENSTTRP00000013832/1-221 SVAKLQDERI VRKICALDDH VCMAFA---- -VSTTFIGLT ADARVVINRA ENSBTAP00000023541/1-261 SVAKLQDERT VRKICALDDH VCMAFAGRLH YSLTVFIGLT ADARVVINKA bmy_19368T0/1-220 SVAKLQDERT VRKICALDDH VCMAFA---- -------GLT ADARVVISRA BACU017850/1-250 SVAKLQDERT VRKICALDDH VCMAFA---- -------GLT ADARVVISRA 101 150 ENSP00000311121/1-256 RVECQSHKLT VEDPVTVEYI TRFIATLKQK YTQSNGRRPF GISALIVGFD ENSTTRP00000013832/1-221 RVECQSHKLT VEDPVTVEYI TRFIATLKQK YTQSNGRRPF GISALIVGFD ENSBTAP00000023541/1-261 RVECQSHKLT VEDPVTVEYI TRFIATLKQK YTQSNGRRPF GISALIVGFD bmy_19368T0/1-220 RVECQSHKLT VEDPVTVEYI TRFIATLKQK YTQSNGRRPF GISALIVGFD BACU017850/1-250 RVECQSHKLT VEDPVTVEYI TRFIATLKQK YTQSNGRRPF GISALIVGFD 151 200 ENSP00000311121/1-256 DDGISRLYQT DPSGTYHAWK ANAIGRSAKT VREFLEKNYT EDAIASDSEA ENSTTRP00000013832/1-221 NDGIPRLYQT DPSGTYHAWK ANAIGRSAKT VREFLEKNYT EDAIANDSEA ENSBTAP00000023541/1-261 DDGIPRLYQT DPSGTYHAWK ANAIGRSAKT VREFLEKNYT EDAIANDNEA bmy_19368T0/1-220 DDGIPRLYQT DPSGTYHAWK ANAIGRSAKT VQEFLEKNYT EDAIANDSEA BACU017850/1-250 DDGIPRLYQT DPSGTYHAWK ANAIGRSAKT VQEFLEKNYT EDAIANDSEA 201 250 ENSP00000311121/1-256 IKLAIKALLE VVQSGGKNIE LAIIRRNQPL KMFSAKEVEL YVTEIEKEKE ENSTTRP00000013832/1-221 IKLAIRALLE VVQYGGKN-E LAIIGRKQPL KMFSAKEIEL QVNETGKKKE ENSBTAP00000023541/1-261 IKLAIRALLE VVQSGGKNIE LAIIRRNQPL KMFSAKEIEL QVNEIEKEKE bmy_19368T0/1-220 IKLAIRALLE VVQSGGKNIE LAIIRRNQPL KMFSAKEIEL QVNETGKEKE BACU017850/1-250 IKLAIRALLE VVQSGGKNIE LAIIRRNQPL KMFSAKEIEL QVNETGKEKE 251 300 ENSP00000311121/1-256 EAEKKKSKKS V ENSTTRP00000013832/1-221 EAKKKKSKKT A ENSBTAP00000023541/1-261 EAEKKKSKKT T bmy_19368T0/1-220 EAEKKKSKKT A BACU017850/1-250 EAEKKKSKKT A