KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:21:00 2014 Check: 00 .. Name: ENSP00000333275/1-603 Len: 628 Check: 8180 Weight: 1.00 Name: ENSBTAP00000023577/1-608 Len: 628 Check: 4920 Weight: 1.00 Name: ENSTTRP00000015454/1-601 Len: 628 Check: 5072 Weight: 1.00 Name: bmy_03583T0/1-579 Len: 628 Check: 3779 Weight: 1.00 Name: BACU020428/1-587 Len: 628 Check: 4768 Weight: 1.00 // 1 50 ENSP00000333275/1-603 ---------M ATIEEI---- ------AHQI IEQ-QMGEIV TEQQTGQKIQ ENSBTAP00000023577/1-608 ---------M ASIEEI---- ------AHQI IEQ-QMGEIV TEQPTGQKIQ ENSTTRP00000015454/1-601 ---------M ATIEEI---- ------AHQI IEQ-QMGEIV TEQQTGQKIQ bmy_03583T0/1-579 MREEELGTVY WGINNIPVVL NRGPSGTEQV IEAFKVLKIV TEQQTGQKIQ BACU020428/1-587 ---------- ---------- ---------- --------IV TEQQTGQKIQ 51 100 ENSP00000333275/1-603 IVTALDHNTQ GKQFILTNHD GSTPSKVILA RQDSTPGKVF LTTPDAAGVN ENSBTAP00000023577/1-608 IVTALDHNTQ GKQFILTNHD GSTPNKVILA RQDSTPGKVF FTTPDAAGVN ENSTTRP00000015454/1-601 IVTALDHNTQ GKQFILTNHS GSTPSKVILA RQDSAPGKVF LTTPDATGVN bmy_03583T0/1-579 IVTALDHNTQ GKQFILTNHS GSTPSKVILS RQDSTPGKVF LTTPDATGVN BACU020428/1-587 IVTALDHNTQ GKQFILTNHS GSTPSKVILS RQDSTPGKVF LTTPDATGVN 101 150 ENSP00000333275/1-603 QLFFTTPDLS AQHLQLLTDN -SPDQGPNKV FDLCVVCGDK ASGRHYGAVT ENSBTAP00000023577/1-608 QLFFTTPDLS TQQLQFLTDN SSSEQGPNKV FDLCVVCGDK ASGRHYGAVT ENSTTRP00000015454/1-601 QFIFTTPDLS AQHLQLLTDN SSSEQGPNKV FDLCVVCGDK ASGRHYGAVT bmy_03583T0/1-579 QFIFTTPDLS AQHLQLLTDN SSSEQGPNKV FDLCVVCGDK ASGRHYGAVT BACU020428/1-587 QFIFTTPDLS AQHLQLLTDN SSSEQGPNKV FDLCVVCGDK ASGRHYGAVT 151 200 ENSP00000333275/1-603 CEGCKGFFKR SIRKNLVYSC RGSKDCIINK HHRNRCQYCR LQRCIAFGMK ENSBTAP00000023577/1-608 CEGCKGFFKR SIRKNLVYSC RGSKDCIINK HHRNRCQYCR LQRCIAFGMK ENSTTRP00000015454/1-601 CEGCKGFFKR SIRKNLVYSC RGSKDCIINK HHRNRCQYCR LQRCIAFGMK bmy_03583T0/1-579 CEGCKGFFKR SIRKNLVYSC RGSKDCIINK HHRNRCQYCR LQRCIAFGMK BACU020428/1-587 CEGCKGFFKR SIRKNLVYSC RGSKDCIINK HHRNRCQYCR LQRCIAFGMK 201 250 ENSP00000333275/1-603 QDSVQCERKP IEVSREKSSN CAASTEKIYI RKDLRSPLTA TPTFVTDSES ENSBTAP00000023577/1-608 QDSVQCERKP IEVSREKSSN CAASTEKIYI RKDLRSPLAA TPTFVTDSET ENSTTRP00000015454/1-601 QDSVQCERKP IEVSREKSSN CAASTEKIYI RKDLRSPLAA TPTFVTDSET bmy_03583T0/1-579 QDSVQCERKP IEVSREKSSN CAASTEKIYI RKDLRSPLAA TPTFVTDSET BACU020428/1-587 QDSVQCERKP IEVSREKSSN CAASTEKIYI RKDLRSPLAA TPTFVTDSET 251 300 ENSP00000333275/1-603 TRSTGLLDSG MFMNIHPSGV KTESAVLMTS DKAESCQGDL STLANVVTSL ENSBTAP00000023577/1-608 ARSAGLLDSG MFVNIHQSGI KTESTMLMTP DKAVSCQGDL STLASVVTSL ENSTTRP00000015454/1-601 ARSAGLLDSG MFVNIHQSGL KTESTMLMTP DKAESCQGDL STLGNVVTSL bmy_03583T0/1-579 ARSAGLLDSG MFVNIHQSGI KTESTVLMTP DKAESCQGDL STLASVVTSL BACU020428/1-587 ARSAGLLDSG MFVNIHQSGI KTESTVLMTP DKAESCQGDL STLASVVTSL 301 350 ENSP00000333275/1-603 ANLGKTKDLS QNSNEMSMIE SLSNDD---T SLCEF-QEMQ TNGDVSRAFD ENSBTAP00000023577/1-608 ANLGKTKDPA PNSNEVSMIE SLSNGDTSYT SVCEFHQEMQ TNGDVSRAFD ENSTTRP00000015454/1-601 GKPWKTKDLS -NSNEMSMIG S-SNGD---T SLCGI-QEMQ TNGDV-RAFD bmy_03583T0/1-579 ANLGKTKDLS QNSNEMSMIE SLSNGD---T SLCEFHQEMQ TNGDVSRAFD BACU020428/1-587 ANLGKTKDLS QNSNEMSVIE SLSNGD---T SLCEFHQEMQ TNGDVSRAFD 351 400 ENSP00000333275/1-603 TLAKALNPGE STACQSSVAG MEGSVHLITG DSSINYTEKE GPLLSDSHVA ENSBTAP00000023577/1-608 TLAKALNPGE STACQSSGEG MEGNVHLIAG DSSINYIEKE GPLLSDSHVA ENSTTRP00000015454/1-601 TLAKALNPGE STACQSSVEG MEGNVHLIAG DSSINYIEKE GPLLSDSHVA bmy_03583T0/1-579 TLAKALNPGE STACQSSVEG MEGNVHLIAG DSSINYIEKE GPLLSDSHVA BACU020428/1-587 TLAKALNPGE STACQSSVEG MEGNVHLIAG DSSINYMEKE GPLLSDSHVA 401 450 ENSP00000333275/1-603 FRLTMPSPMP EYLNVHYIGE SASRLLFLSM HWALSIPSFQ ALGQENSISL ENSBTAP00000023577/1-608 FRLTMPSPMP EYLNVHYIGE SASRLLFLSM HWALSIPSFQ ALGQENSISL ENSTTRP00000015454/1-601 FRLTMPSPMP EYLNVHYIGE SASRLLFLSM HWALSIPSFQ ALGQENSILL bmy_03583T0/1-579 FRLTMPSPMP EYLNVHYIGE SASRLLFLSM HWALSIPSFQ ALGQENSILL BACU020428/1-587 FRLTMPSPMP EYLNVHYIGE SASRLLFLSM HWALSIPSFQ ALGQENSILL 451 500 ENSP00000333275/1-603 VKAYWNELFT LGLAQCWQVM NVATILATFV NCLHNSLQQD KMSTERRKLL ENSBTAP00000023577/1-608 VKAYWNELFT LGLAQCWQVM NVATILATFV NCLHSSLQQD KISAERRKLL ENSTTRP00000015454/1-601 VKAYWNELFT LGLAQCWQVM NVATILATFV NCLHSSLQQD KMSTERRKLL bmy_03583T0/1-579 VKAYWNELFT LGLAQCWQVM NVAAILATFV NCLHSSLQQ- ---------- BACU020428/1-587 VKAYWNELFT LGLAQCWQVM NVAAILATFV NCLHSSLQQD KMSTERRKLL 501 550 ENSP00000333275/1-603 MEHIFKLQEF CNSMVKLCID GYEYAYLKAI VLFSPDHPSL ENMEQIEKFQ ENSBTAP00000023577/1-608 MEHIFKLQEF CNSMVKLCID GYEYAYLKAI VLFSPDHPGL ENMEQIEKFQ ENSTTRP00000015454/1-601 MEHIFKLQEF CNSMVKLCID GYEYAYLKAI VLFSPDHPGL ENMQQIEKFQ bmy_03583T0/1-579 ---------- ---------- ---------- -----DHPGL ENMQQIEKFQ BACU020428/1-587 MEHIFKLQEF CNSMVKLCID GYEYAYLKAI VLFSPDHPGL ENMQQIEKFQ 551 600 ENSP00000333275/1-603 EKAYVEFQDY ITKTYPDDTY RLSRLLLRLP ALRLMNATIT EELFFKGLIG ENSBTAP00000023577/1-608 EKAYVEFQDY ITKTYPDDTY RLSRLLLRLP ALRLMNATIT EELFFKGLIG ENSTTRP00000015454/1-601 EKAYVEFQDY ITKTYPDDTY RLSRLLLRLP ALRLMNATIT EELFFKGLIG bmy_03583T0/1-579 EKAYVEFQDY ITKTYPDDTY RLSRLLLRLP ALRLMNATIT EELFFKGLIG BACU020428/1-587 EKAYVEFQDY ITKTYPDDTY RLSRLLLRLP ALRLMNATIT EELFFKGLIG 601 650 ENSP00000333275/1-603 NIRIDSVIPH ILKMEPADYN SQIIGHSI ENSBTAP00000023577/1-608 NVRIDSVIPH ILKMEPADYN SQIIGHSI ENSTTRP00000015454/1-601 NVRIDSVIPH ILKMEPADYN SQIIGHSI bmy_03583T0/1-579 NVRIDSVIPH ILKMEPADYN SQIIGHSI BACU020428/1-587 NVRIDSVIPH ILKMEPADYN SQIIGHSI