KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:21:10 2014 Check: 00 .. Name: ENSP00000400142/1-661 Len: 662 Check: 2773 Weight: 1.00 Name: ENSBTAP00000023612/1-655 Len: 662 Check: 3967 Weight: 1.00 Name: ENSTTRP00000011269/1-662 Len: 662 Check: 9112 Weight: 1.00 Name: bmy_01627T0/1-656 Len: 662 Check: 7028 Weight: 1.00 Name: BACU003351/1-661 Len: 662 Check: 1996 Weight: 1.00 // 1 50 ENSP00000400142/1-661 MASTDYSTYS QAAAQQGYSA YTAQPTQGYA QTTQAYGQQS YGTYGQPTDV ENSBTAP00000023612/1-655 MASTDYSTYS QAAAQQGYSA YTAQPTQGYA QTTQAYGQQS YGTYGQPTDV ENSTTRP00000011269/1-662 MASTDYSTYS QAAAQQGYSA YTAQPTQGYA QTTQAYGQQS YGTYGQPTDV bmy_01627T0/1-656 MASTDYSTYS QAAAQQGYSA YTAQPTQGYA QTTQAYGQQS YGTYGQPTDV BACU003351/1-661 MASTDYSTYS QAAAQQGYSA YTAQPTQGYA QTTQAYGQQS YGTYGQPTDV 51 100 ENSP00000400142/1-661 SYTQAQTTAT YGQTAYATSY GQPPTVEGTS TGYTTPTAPQ AYSQPVQGYG ENSBTAP00000023612/1-655 SYTQAQTTAT YGQTAYATSY GQPP------ TGYSTPAAPQ AYSQPVQGYG ENSTTRP00000011269/1-662 SYTQAQTTAT YGQTAYATSY GQPPTVEGTS TGYSTPTAPQ AYSQPVQGYG bmy_01627T0/1-656 SYTQAQTTAT YGQTAYATSY GQPP------ TGYSTPTAPQ AYSQPVQGYG BACU003351/1-661 SYTQAQTTAT YGQTAYATSY GQPPTVEGTS TGYSTPTAPQ AYSQPVQGYG 101 150 ENSP00000400142/1-661 TGAYDTTTAT VTTTQASYAA QSAYGTQPAY PAYGQQPAAT APTRPQDGNK ENSBTAP00000023612/1-655 TGAYDTTTAT VTTTQASYAA QSAYGTQPAY PAYGQQPAAT APARPQDGNK ENSTTRP00000011269/1-662 TGAYDTTTAT VTTTQASYAA QSAYGTQPAY PAYGQQPAAT APARPQXXXX bmy_01627T0/1-656 TGAYDTTTAT VTTTQASYAA QSAYGTQPAY PAYGQQPAAT APARPQDGNK BACU003351/1-661 TGAYDTTTAT VTTTQASYAA QSAYGTQPAY PAYGQQPAAT APARPQDGNK 151 200 ENSP00000400142/1-661 PTETSQPQSS TGGYNQPSLG YGQSNYSYPQ VPGSYPMQPV TAPPSYPPTS ENSBTAP00000023612/1-655 PAETSQPQSS TGGYNQPSLG YGQSNYSYPQ VPGSYPMQPV SAPPSYPPTS ENSTTRP00000011269/1-662 XXXXXQPQSS TGGYNQPSLG YGQSNYSYPQ VPGSYPMQPV TAPPSYPPTS bmy_01627T0/1-656 PAETSQPQSS TGGYNQPSLG YGQSNYSYPQ VPGSYPMQPV TAPPSYPPTS BACU003351/1-661 PAETSQPQSS TGGYNQPSLG YGQSNYSYPQ VPGSYPMQPV TAPPSYPPTS 201 250 ENSP00000400142/1-661 YSSTQPTSYD QSSYSQQNTY GQPSSYGQQS SYGQQSSYGQ QPPTSYPPQT ENSBTAP00000023612/1-655 YSSTQPTSYD QSSYSQQNTY GQPSSYGQQS SYGQQSSYGQ QPPTSYPPQT ENSTTRP00000011269/1-662 YSSTQPTSYD QSSYSQQNTY GQPSSYGQQS SYGQQSSYGQ QPPTSYPPQT bmy_01627T0/1-656 YSSTQPTSYD QSSYSQQNTY GQPSSYGQQS SYGQQSSYGQ QPPTSYPPQT BACU003351/1-661 YSSTQPTSYD QSSYSQQNTY GQPSSYGQQS SYGQQSSYGQ QPPTSYPPQT 251 300 ENSP00000400142/1-661 GSYSQAPSQY SQQSSSYGQQ SSFRQDHPSS MGVYGQESGG FSGPGENRSM ENSBTAP00000023612/1-655 GSYSQAPSQY SQQSSSYGQQ SSFRQDHPSS MGVYGQESGG FSGPGENRSM ENSTTRP00000011269/1-662 GSYSQAPSQY SQQSSSYGQQ SSFRQDHPSS MGVYGQESGG FSGPGENRSM bmy_01627T0/1-656 GSYSQAPSQY SQQSSSYGQQ SSFRQDHPSS MGVYGQESGG FSGPGENRSM BACU003351/1-661 GSYSQAPSQY SQQSSSYGQQ SSFRQDHPSS MGVYGQESGG FSGPGENRSM 301 350 ENSP00000400142/1-661 SGPDNRGRGR GGFDRGGMSR GGRGGGRGGM G-AGERGGFN KPGGPMDEGP ENSBTAP00000023612/1-655 SGPDNRGRGR GGFDRGGMSR GGRGGGRGGM G-AGERGGFN KPGGPMDEGP ENSTTRP00000011269/1-662 SGPDNRGRGR GGFDRGGMSR GGRGGGRGGM GSAGERGGFN KPGGPMDEGP bmy_01627T0/1-656 SGPDNRGRGR GGFDRGGMSR GGRGGGRGGM GSAGERGGFN KPGGPMDEGP BACU003351/1-661 SGPDNRGRGR GGFDRGGMSR GGRGGGRGGM G-AGERGGFN KPGGPMDEGP 351 400 ENSP00000400142/1-661 DLDLGPPVDP DEDSDNSAIY VQGLNDSVTL DDLADFFKQC GVVKMNKRTG ENSBTAP00000023612/1-655 DLDLGPPVDP DEDSDNSAIY VQGLNDSVTL DDLVDFFKQC GVVKMNKRTG ENSTTRP00000011269/1-662 DLDLGPPVDP DEDCDNSAIY VQGLSDSVTL DDLADFFKQC GVVKINKRTG bmy_01627T0/1-656 DLDLGPPVDP DEDCDNSAIY VQGLSDNVTL DDLADFFKQC GVVKINKRTG BACU003351/1-661 DLDLGPPVDP DEDCDNSAIY VQGLSDNVTL DDLADFFKQC GVVKINKRTG 401 450 ENSP00000400142/1-661 QPMIHIYLDK ETGKPKGDAT VSYEDPPTAK AAVEWFDGKD FQGSKLKVSL ENSBTAP00000023612/1-655 QPMIHIYLDK ETGKPKGDAT VSYEDPATAK AAVEWFDGKD FQGSKLKVSL ENSTTRP00000011269/1-662 QPMIHIYLDK ETGKPKGDAT VSYEDPPTAK TAVEWFDGKD FQGSKLKVSL bmy_01627T0/1-656 QPMIHIYLDK ETGKPKGDAT VSYEDPPTAK TAVEWFDGKD FQGSKLKVSL BACU003351/1-661 QPMIHIYLDK ETGKPKGDAT VSYEDPPTAK TAVEWFDGKD FQGSKLKVSL 451 500 ENSP00000400142/1-661 ARKKPPMNSM RGGLPPREGR GMPPPLRGGP GGPGGPGGPM GRMGGRGGDR ENSBTAP00000023612/1-655 ARKKPPMNSM RGGMPPREGR GMPPPLRGGP GGPGGPGGPM GRMGGRGGDR ENSTTRP00000011269/1-662 ARKKPPMNSM RGGMPPREGR GMPPPLRGGP GGPGGPGGPM GRMGGRGGDR bmy_01627T0/1-656 ARKKPPMNSM RGGMPPREGR GMPPPLRGGP GGPGGPGGPM GRMGGRGGDR BACU003351/1-661 ARKKPPMNSM RGGMPPREGR GMPPPLRGGP GGPGGPGGPM GRMGGRGGDR 501 550 ENSP00000400142/1-661 GGFPPRGPRG SRGNPSGGGN VQHRAGDWQC PNPGCGNQNF AWRTECNQCK ENSBTAP00000023612/1-655 GGFPPRGPRG SRGNPSGGGN VQHRAGDWQC PNPGCGNQNF AWRTECNQCK ENSTTRP00000011269/1-662 GGFPPRGPRG SRGNPSGGGN VQHRAGDWQC PNPGCGNQNF AWRTECNQCK bmy_01627T0/1-656 GGFPPRGPRG SRGNPSGGGN VQHRAGDWQC PNPGCGNQNF AWRTECNQCK BACU003351/1-661 GGFPPRGPRG SRGNPSGGGN VQHRAGDWQC PNPGCGNQNF AWRTECNQCK 551 600 ENSP00000400142/1-661 APKPEGFLPP PFPPPGGDRG RGGPGGMRGG RGGLMDRGGP GGMFRGGRGG ENSBTAP00000023612/1-655 APKPEGFLPP PFPPPGGDRG RGGPGGMRGG RGGLMDRGGP GGMFRGGRGG ENSTTRP00000011269/1-662 APKPEGFLPP PFPPPGGDRG RGGPGGMRGG RGGLMDRGGP GGMFRGGRGG bmy_01627T0/1-656 APKPEGFLPP PFPPPGGDRG RGGPGGMRGG RGGLMDRGGP GGMFRGGRGG BACU003351/1-661 APKPEGFLPP PFPPPGGDRG RGGPGGMRGG RGGLMDRGGP GGMFRGGRGG 601 650 ENSP00000400142/1-661 DRGGFRGGRG MDRGGFGGGR RGGPGGPPGP LMEQMGGRRG GRGGPGKMDK ENSBTAP00000023612/1-655 DRGGFRGGRG MDRGGFGGGR RGGPGGPPGP LMEQMGGRRG GRGGPGKMDK ENSTTRP00000011269/1-662 DRGGFRGTRG MDRGGFGGGR RGGPGGPPGP LMEQMGGRRG GRGGPGKMDK bmy_01627T0/1-656 DRGGFRGTRG MDRGGFGGGR RGGPGGPPGP LMEQMGGRRG GRGGPGKMDK BACU003351/1-661 DRGGFRGTRG MDRGGFGGGR RGGPGGPPGP LMEQMGGRRG GRGGPGKMDK 651 700 ENSP00000400142/1-661 GEHRQERRDR PY ENSBTAP00000023612/1-655 GEHRQERRDR PY ENSTTRP00000011269/1-662 GEHRQERRDR PY bmy_01627T0/1-656 GEHRQERRDR PY BACU003351/1-661 GEHRQERRDR PY