KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:21:12 2014 Check: 00 .. Name: BACU010674/1-1192 Len: 1244 Check: 3938 Weight: 1.00 Name: ENSP00000323421/1-1233 Len: 1244 Check: 6616 Weight: 1.00 Name: ENSTTRP00000010833/1-1233 Len: 1244 Check: 8061 Weight: 1.00 Name: bmy_20031T0/1-1233 Len: 1244 Check: 7233 Weight: 1.00 Name: ENSBTAP00000023619/1-1232 Len: 1244 Check: 4392 Weight: 1.00 // 1 50 BACU010674/1-1192 MGFLKLIEIE NFKSYKGRQI IGPFQRFTAI IGPNGSGKSN LMDAISFVLG ENSP00000323421/1-1233 MGFLKLIEIE NFKSYKGRQI IGPFQRFTAI IGPNGSGKSN LMDAISFVLG ENSTTRP00000010833/1-1233 MGFLKLIEIE NFKSYKGRQI IGPFQRFTAI IGPNGSGKSN LMDAISFVLG bmy_20031T0/1-1233 MGFLKLIEIE NFKSYKGRQI IGPFQRFTAI IGPNGSGKSN LMDAISFVLG ENSBTAP00000023619/1-1232 MGFLKLIEIE NFKSYKGRQI IGPFQRFTAI IGPNGSGKSN LMDAISFVLG 51 100 BACU010674/1-1192 EKTSNLRVKT LRDLIHGAPV GKPAANRAFV SMVYSEEGAE DRTFARVIVG ENSP00000323421/1-1233 EKTSNLRVKT LRDLIHGAPV GKPAANRAFV SMVYSEEGAE DRTFARVIVG ENSTTRP00000010833/1-1233 EKTSNLRVKT LRDLIHGAPV GKPAANRAFV SMVYSEEGAE DRTFARVIVG bmy_20031T0/1-1233 EKTSNLRVKT LRDLIHGAPV GKPAANRAFV SMVYSEEGAE DRTFARVIVG ENSBTAP00000023619/1-1232 EKTSNLRVKT LRDLIHGAPV GKPAANRAFV SMVYSEEGAE DRTFARVIVG 101 150 BACU010674/1-1192 GSSEYKINNK VVQLHEYSEE LEKLGILIKA RNFLVFQGAV ESIAMKNPKE ENSP00000323421/1-1233 GSSEYKINNK VVQLHEYSEE LEKLGILIKA RNFLVFQGAV ESIAMKNPKE ENSTTRP00000010833/1-1233 GSSEYKINNK VVQLHEYSEE LEKLGILIKA RNFLVFQGAV ESIAMKNPKE bmy_20031T0/1-1233 GSSEYKINNK VVQLHEYSEE LEKLGILIKA RNFLVFQGAV ESIAMKNPKE ENSBTAP00000023619/1-1232 GSSEYKINNK VVQLHEYSEE LEKLGILIKA RNFLVFQGAV ESIAMKNPKE 151 200 BACU010674/1-1192 RTALFEEISR SGELAQEYDK RKKEMVKAEE DTQFNYHRKK NIAAERKEAK ENSP00000323421/1-1233 RTALFEEISR SGELAQEYDK RKKEMVKAEE DTQFNYHRKK NIAAERKEAK ENSTTRP00000010833/1-1233 RTALFEEISR SGELAQEYDK RKKEMVKAEE DTQFNYHRKK NIAAERKEAK bmy_20031T0/1-1233 RTALFEEISR SGELAQEYDK RKKEMVKAEE DTQFNYHRKK NIAAERKEAK ENSBTAP00000023619/1-1232 RTALFEEISR SGELAQEYDK RKKEMVKAEE DTQFNYHRKK NIAAERKEAK 201 250 BACU010674/1-1192 QEKEEADRYQ RLKDEVVRAQ VQLQLFKLYH NEVEIEKLNK ELASKNKEIE ENSP00000323421/1-1233 QEKEEADRYQ RLKDEVVRAQ VQLQLFKLYH NEVEIEKLNK ELASKNKEIE ENSTTRP00000010833/1-1233 QEKEEADRYQ RLKDEVVRAQ VQLQLFKLYH NEVEIEKLNK ELASKNKEIE bmy_20031T0/1-1233 QEKEEADRYQ RLKDEVVRAQ VQLQLFKLYH NEVEIEKLNK ELASKNKEIE ENSBTAP00000023619/1-1232 QEKEEADRYQ RLKDEVVRAQ VQLQLFKLYH NEVEIEKLNK ELASKNKEIE 251 300 BACU010674/1-1192 KDKKRMDKVE DELKEKKKEL GKMMREQQQI EKEIKEKDSE LNQKRPQYIK ENSP00000323421/1-1233 KDKKRMDKVE DELKEKKKEL GKMMREQQQI EKEIKEKDSE LNQKRPQYIK ENSTTRP00000010833/1-1233 KDKKRMDKVE DELKEKKKEL GKMMREQQQI EKEIKEKDSE LNQKRPQYIK bmy_20031T0/1-1233 KDKKRMDKVE DELKEKKKEL GKMMREQQQI EKEIKEKDSE LNQKRPQYIK ENSBTAP00000023619/1-1232 KDKKRMDKVE DELKEKKKEL GKMMREQQQI EKEIKEKDSE LNQKRPQYIK 301 350 BACU010674/1-1192 AKENTSHKIK KLEAAKKSLQ NAQKHYKKRK GDMDELEKEM LSVEKARQEF ENSP00000323421/1-1233 AKENTSHKIK KLEAAKKSLQ NAQKHYKKRK GDMDELEKEM LSVEKARQEF ENSTTRP00000010833/1-1233 AKENTSHKIK KLEAAKKSLQ NAQKHYKKRK GDMDELEKEM LSVEKARQEF bmy_20031T0/1-1233 AKENTSHKIK KLEAAKKSLQ NAQKHYKKRK GDMDELEKEM LSVEKARQEF ENSBTAP00000023619/1-1232 AKENTSHKIK KLEAAKKSLQ NAQKHYKKRK GDMDELEKEM LSVEKARQEF 351 400 BACU010674/1-1192 EERMEEESQS QGRDLTLEEN QVKKYHRLKE EASKRAATLA QELEKFNRDQ ENSP00000323421/1-1233 EERMEEESQS QGRDLTLEEN QVKKYHRLKE EASKRAATLA QELEKFNRDQ ENSTTRP00000010833/1-1233 EERMEEESQS QGRDLTLEEN QVKKYHRLKE EASKRAATLA QELEKFNRDQ bmy_20031T0/1-1233 EERMEEESQS QGRDLTLEEN QVKKYHRLKE EASKRAATLA QELEKFNRDQ ENSBTAP00000023619/1-1232 EERMEEESQS QGRDLTLEEN QVKKYHRLKE EASKRAATLA QELEKFNRDQ 401 450 BACU010674/1-1192 KADQDRLDL- --KKVETEAK IKQKLREIEE NQKRIEKLEE YITTSKQSLE ENSP00000323421/1-1233 KADQDRLDLE ERKKVETEAK IKQKLREIEE NQKRIEKLEE YITTSKQSLE ENSTTRP00000010833/1-1233 KADQDRLDLE ERKKVETEAK IKQKLREIEE NQKRIEKLEE YITTSKQSLE bmy_20031T0/1-1233 KADQDRLDLE ERKKVETEAK IKQKLREIEE NQKRIEKLEE YITTSKQSLE ENSBTAP00000023619/1-1232 KADQDRLDLE ERKKVETEAK IKQKLREIEE NQKRIEKLEE YITTSKQSLE 451 500 BACU010674/1-1192 EQKKLEGELT EEVEMAKRRI DEINKELNQV MEQLGDARID RQESSRQQRK ENSP00000323421/1-1233 EQKKLEGELT EEVEMAKRRI DEINKELNQV MEQLGDARID RQESSRQQRK ENSTTRP00000010833/1-1233 EQKKLEGELT EEVEMAKRRI DEINKELNQV MEQLGDARID RQESSRQQRK bmy_20031T0/1-1233 EQKKLEGELT EEVEMAKRRI DEINKELNQV MEQLGDARID RQESSRQQRK ENSBTAP00000023619/1-1232 EQKKLEGELT EEVEMAKRRI DEINKELNQV MEQLGDARID RQESSRQQRK 501 550 BACU010674/1-1192 AEIMESIKRL YPGSVYGRLI DLCQPTQKKY QIAVTKVLGK NMDAIIVDSE ENSP00000323421/1-1233 AEIMESIKRL YPGSVYGRLI DLCQPTQKKY QIAVTKVLGK NMDAIIVDSE ENSTTRP00000010833/1-1233 AEIMESIKRL YPGSVYGRLI DLCQPTQKKY QIAVTKVLGK NMDAIIVDSE bmy_20031T0/1-1233 AEIMESIKRL YPGSVYGRLI DLCQPTQKKY QIAVTKVLGK NMDAIIVDSE ENSBTAP00000023619/1-1232 AEIMESIKRL YPGSVYGRLI DLCQPTQKKY QIAVTKVLGK NMDAIIVDSE 551 600 BACU010674/1-1192 KTGRDCIQYI KEQRGEPETF LPLDYLEVKP TDEKLRELKG AKLVIDVIRY ENSP00000323421/1-1233 KTGRDCIQYI KEQRGEPETF LPLDYLEVKP TDEKLRELKG AKLVIDVIRY ENSTTRP00000010833/1-1233 KTGRDCIQYI KEQRGEPETF LPLDYLEVKP TDEKLRELKG AKLVIDVIRY bmy_20031T0/1-1233 KTGRDCIQYI KEQRGEPETF LPLDYLEVKP TDEKLRELKG AKLVIDVIRY ENSBTAP00000023619/1-1232 KTGRDCIQYI KEQRGEPETF LPLDYLEVKP TDEKLRELKG AKLVIDVIRY 601 650 BACU010674/1-1192 EPPHIKKALQ YACGNALVCD NVEDARRIAF GGHQRH---- ---------- ENSP00000323421/1-1233 EPPHIKKALQ YACGNALVCD NVEDARRIAF GGHQRHKTVA LDGTLFQKSG ENSTTRP00000010833/1-1233 EPPHIKKALQ YACGNALVCD NVEDARRIAF GGHQRHKTVA LDGTLFQKSG bmy_20031T0/1-1233 EPPHIKKALQ YACGNALVCD NVEDARRIAF GGHQRHKTVA LDGTLFQKSG ENSBTAP00000023619/1-1232 EPPHIKKALQ YACGNALVCD NVEDARRIAF GGHQRHKTVA LDGTLFQKSG 651 700 BACU010674/1-1192 ---------- ---------- ---------- -----KEQMK AKRKEAELRQ ENSP00000323421/1-1233 VISGGASDLK AKARRWDEKA VDKLKEKKER LTEELKEQMK AKRKEAELRQ ENSTTRP00000010833/1-1233 VISGGASDLK AKARRWDEKA VDKLKEKKER LTEELKEQMK AKRKEAELRQ bmy_20031T0/1-1233 VISGGASDLK AKARRWDEKA VDKLKEKKER LTEELKEQMK AKRKEAELRQ ENSBTAP00000023619/1-1232 VISGGASDLK AKARRWDEKA VDKLKEKKER LTEELKEQMK AKRKEAELRQ 701 750 BACU010674/1-1192 VQSQAHGLQM RLKYSQSDLE QTKTRHLALN LQEKSKLESE LANFGPRIND ENSP00000323421/1-1233 VQSQAHGLQM RLKYSQSDLE QTKTRHLALN LQEKSKLESE LANFGPRIND ENSTTRP00000010833/1-1233 VQSQAHGLQM RLKYSQSDLE QTKTRHLALN LQEKSKLESE LANFGPRIND bmy_20031T0/1-1233 VQSQAHGLQM RLKYSQSDLE QTKTRHLALN LQEKSKLESE LANFGPRIND ENSBTAP00000023619/1-1232 VQSQAHGLQM RLKYSQSDLE QTKTRHLALN LQEKSKLESE LANFGPRIND 751 800 BACU010674/1-1192 IKRIIQSRER EMKDLKEKMN QVEDEVFEEF CREIGVRNIR EFEEEKVKRQ ENSP00000323421/1-1233 IKRIIQSRER EMKDLKEKMN QVEDEVFEEF CREIGVRNIR EFEEEKVKRQ ENSTTRP00000010833/1-1233 IKRIIQSRER EMKDLKEKMN QVEDEVFEEF CREIGVRNIR EFEEEKVKRQ bmy_20031T0/1-1233 IKRIIQSRER EMKDLKEKMN QVEDEVFEEF CREIGVRNIR EFEEEKVKRQ ENSBTAP00000023619/1-1232 IKRIIQSRER EMKDLKEKMN QVEDEVFEEF CREIGVRNIR EFEEEKVKRQ 801 850 BACU010674/1-1192 NEIAKKRLEF ENQKTRLGIQ LDFEKNQLKE DQDKVHMWEQ TVKKDENEIE ENSP00000323421/1-1233 NEIAKKRLEF ENQKTRLGIQ LDFEKNQLKE DQDKVHMWEQ TVKKDENEIE ENSTTRP00000010833/1-1233 NEIAKKRLEF ENQKTRLGIQ LDFEKNQLKE DQDKVHMWEQ TVKKDENEIE bmy_20031T0/1-1233 NEIAKKRLEF ENQKTRLGIQ LDFEKNQLKE DQDKVHMWEQ TVKKDENEIE ENSBTAP00000023619/1-1232 NEIAKKRLEF ENQKTRLGIQ LDFEKNQLKE DQDKVHMWEQ TVKKDENEIE 851 900 BACU010674/1-1192 KLKKEEQRHM KIIDETMAQL QDLKNQHLAK KSEVNDKNHE MEEIRKKLGG ENSP00000323421/1-1233 KLKKEEQRHM KIIDETMAQL QDLKNQHLAK KSEVNDKNHE MEEIRKKLGG ENSTTRP00000010833/1-1233 KLKKEEQRHM KIIDETMAQL QDLKNQHLAK KSEVNDKNHE MEEIRKKLGG bmy_20031T0/1-1233 KLKKEEQRHM KIIDETMAQL QDLKNQHLAK KSEVNDKNHE MEEIRKKLGG ENSBTAP00000023619/1-1232 KLKKEEQRHM KIIDETMAQL QDLKNQHLAK KSEVNDKNHE MEEIRKKLGG 901 950 BACU010674/1-1192 ANKEMTHLQK EVTAIETKLE QKRSDRHNLL QACKMQDIKL PLSKGTMDDI ENSP00000323421/1-1233 ANKEMTHLQK EVTAIETKLE QKRSDRHNLL QACKMQDIKL PLSKGTMDDI ENSTTRP00000010833/1-1233 ANKEMTHLQK EVTAIETKLE QKRSDRHNLL QACKMQDIKL PLSKGTMDDI bmy_20031T0/1-1233 ANKEMTHLQK EVTAIETKLE QKRSDRHNLL QACKMQDIKL PLSKGTMDDI ENSBTAP00000023619/1-1232 ANKEMTHLQK EVTAIETKLE QKRSDRHNLL QACKMQDIKL PLSKGTMDDI 951 1000 BACU010674/1-1192 SQEEGSSQGE DSVSGSQRTS NIYAREALIE IDYGDLCEDL KDAQAEEEIK ENSP00000323421/1-1233 SQEEGSSQGE DSVSGSQRIS SIYAREALIE IDYGDLCEDL KDAQAEEEIK ENSTTRP00000010833/1-1233 SQEEGSSQGE DSVSGSQRTS NIYAREALIE IDYGDLCEDL KDAQAEEEIK bmy_20031T0/1-1233 SQEEGSSQGE DSVSGSQRTS NIYAREALIE IDYGDLCEDL KDAQAEEEIK ENSBTAP00000023619/1-1232 SQEEGSSQGE DSVSGSQRTS NIYAREALIE IDYGDLCEDL KDAQAEEEIK 1001 1050 BACU010674/1-1192 QEMNTLQQKL NEQQSVLQRI AAPNMKAMEK LESVRDKFQE TSDEFEAARK ENSP00000323421/1-1233 QEMNTLQQKL NEQQSVLQRI AAPNMKAMEK LESVRDKFQE TSDEFEAARK ENSTTRP00000010833/1-1233 QEMNTLQQKL NEQQSVLQRI AAPNMKAMEK LESVRDKFQE TSDEFEAARK bmy_20031T0/1-1233 QEMNTLQQKL NEQQSVLQRI AAPNMKAMEK LESVRDKFQE TSDEFEAARK ENSBTAP00000023619/1-1232 QEMNTLQQKL NEQQSVLQRI AAPNMKAMEK LESVRDKFQE TSDEFEAARK 1051 1100 BACU010674/1-1192 RAKKAKQAFE QIKKERFDRF NACFESVATN IDEIYKALSR NSSAQTQTLD ENSP00000323421/1-1233 RAKKAKQAFE QIKKERFDRF NACFESVATN IDEIYKALSR NSSAQA---- ENSTTRP00000010833/1-1233 RAKKAKQAFE QIKKERFDRF NSCFESVATN IDEIYKALSR NSSAQA---- bmy_20031T0/1-1233 RAKKAKQAFE QIKKERFDRF NACFESVATN IDEIYKALSR NSSAQA---- ENSBTAP00000023619/1-1232 RAKKAKQAFE QIKKERFDRF NACFESVATN IDEIYKALSR NSSAQA---- 1101 1150 BACU010674/1-1192 PSPFPLXXXX XXXXXXXXLD GINYNCVAPG KRFRPMDNLS GGEKTVAALA ENSP00000323421/1-1233 -------FLG PENPEEPYLD GINYNCVAPG KRFRPMDNLS GGEKTVAALA ENSTTRP00000010833/1-1233 -------FLG PENPEEPYLD GINYNCVAPG KRFRPMDNLS GGEKTVAALA bmy_20031T0/1-1233 -------FLG PENPEEPYLD GINYNCVAPG KRFRPMDNLS GGEKTVAALA ENSBTAP00000023619/1-1232 -------FLG PENPEEPYLD GINYNCVAPG KRFRPMDNLS -GEKTVAALA 1151 1200 BACU010674/1-1192 LLFAIHSYKP APFFLLDEID AALDNTNIGK VANYIKEQST CNFQAIVISL ENSP00000323421/1-1233 LLFAIHSYKP APFFVLDEID AALDNTNIGK VANYIKEQST CNFQAIVISL ENSTTRP00000010833/1-1233 LLFAIHSYKP APFFVLDEID AALDNTNIGK VANYIKEQST CNFQAIVISL bmy_20031T0/1-1233 LLFAIHSYKP APFFVLDEID AALDNTNIGK VANYIKEQST CNFQAIVISL ENSBTAP00000023619/1-1232 LLFAIHSYKP APFFVLDEID AALDNTNIGK VANYIKEQST CNFQAIVISL 1201 1250 BACU010674/1-1192 KEEFYTKAES LIGVYPEQGD CVISKVLTFD LTKYPDANPN PNEQ ENSP00000323421/1-1233 KEEFYTKAES LIGVYPEQGD CVISKVLTFD LTKYPDANPN PNEQ ENSTTRP00000010833/1-1233 KEEFYTKAES LIGVYPEQGD CVISKVLTFD LTKYPDANPN PNEQ bmy_20031T0/1-1233 KEEFYTKAES LIGVYPEQGD CVISKVLTFD LTKYPDANPN PNEQ ENSBTAP00000023619/1-1232 KEEFYTKAES LIGVYPEQGD CVISKVLTFD LTKYPDANPN PNEQ