KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:21:14 2014 Check: 00 .. Name: ENSBTAP00000023643/1-572 Len: 629 Check: 4079 Weight: 1.00 Name: ENSP00000339850/1-572 Len: 629 Check: 3073 Weight: 1.00 Name: BACU004774/1-509 Len: 629 Check: 2479 Weight: 1.00 Name: bmy_09739T0/1-629 Len: 629 Check: 5361 Weight: 1.00 Name: ENSTTRP00000006167/1-571 Len: 629 Check: 9446 Weight: 1.00 // 1 50 ENSBTAP00000023643/1-572 MSFQGKKSIP RITSDRLLIR GGKIVNDDQS FHADLYVEDG LIKQIGENLI ENSP00000339850/1-572 MSFQGKKSIP RITSDRLLIR GGRIVNDDQS FYADVHVEDG LIKQIGENLI BACU004774/1-509 ---------- ---------- ---------- ---------- ---------- bmy_09739T0/1-629 MSFQGKKSIP RITSDRLLVR GGRIVNDDQS FYADVYVEDG LIKQIGENLI ENSTTRP00000006167/1-571 MSFQGKKSIP RITSDRLLIR GGRIVNDDQS FYADLYVEDG LIKQIGENLI 51 100 ENSBTAP00000023643/1-572 VPGGIRTIDA HGLLVLPGGV DVHTRLLMPV LGMTPADDFC QGTKAALAGG ENSP00000339850/1-572 VPGGIKTIDA HGLMVLPGGV DVHTRLQMPV LGMTPADDFC QGTKAALAGG BACU004774/1-509 ---------- ---MVLPGGV DVHTRLQMPV LGMTPADDFC QGTKAALAGG bmy_09739T0/1-629 VPGGIKTIDA HGLMVLPGGV DVHTRLQMPV LGMTPADDFC QGTKAALAGG ENSTTRP00000006167/1-571 IPGGMKTIDA HGLMVLPGGV DVHTRLQMPV LGMTPADDFC QGTKAALAGG 101 150 ENSBTAP00000023643/1-572 TTMI------ ---------- ---------- ---------L DHVFPEAGVS ENSP00000339850/1-572 TTMI------ ---------- ---------- ---------L DHVFPDTGVS BACU004774/1-509 TTMI------ ---------- ---------- ---------L DHVFPDTGVS bmy_09739T0/1-629 TTMIHVLPGF LGTRSHSPSE AQVVPVAWVG GSADRAVPTV DHVFPDTGVS ENSTTRP00000006167/1-571 TTMI------ ---------- ---------- ---------L DHVFPDTGVS 151 200 ENSBTAP00000023643/1-572 LLAAYEQWRE RADGGACCDY SLHVDIPRWH ESTREELEAL VRDKGVNSFL ENSP00000339850/1-572 LLAAYEQWRE RADSAACCDY SLHVDITRWH ESIKEELEAL VKEKGVNSFL BACU004774/1-509 LLAAYEQWRE RADRGACCDY SLHVDVPRWH ESTREELEAL VKDKGVNSFL bmy_09739T0/1-629 LLAAYEQWRE RADRGACCDY SLHVDVPRWH ESTREELEAL VKDKGVNSFL ENSTTRP00000006167/1-571 LLAAYEQWRE RADRGACCDY SLHVDIPRWH ESTREELEVL VKDKGVNSFL 201 250 ENSBTAP00000023643/1-572 VFMAYKDRHQ CTDGQIYEIF SVIRDLGAVA QVHAENGDIV DE------EQ ENSP00000339850/1-572 VFMAYKDRCQ CSDSQMYEIF SIIRDLGALA QVHAENGDIV EE------EQ BACU004774/1-509 VFMAYKDRCQ CTDGQMYEIF SVIRDLGAVA QVHAENGDIV DE------EQ bmy_09739T0/1-629 VFMAYKDRCQ CTDGQMYEIF SVIRDLGAVA QVHAENGDIV DEVWAGLAGR ENSTTRP00000006167/1-571 VFMAYKDRYQ CTDGQMYEIF SVIRDLGAVA QVHAENGDIV DE------EQ 251 300 ENSBTAP00000023643/1-572 KRLLELGVTG PEGHVLSHPE E--------- -------VEA EAVYRAITIA ENSP00000339850/1-572 KRLLELGITG PEGHVLSHPE E--------- -------VEA EAVYRAVTIA BACU004774/1-509 KRLLALGITG PEGHMLSHPE E--------- -------GEA EAVYRAVTVA bmy_09739T0/1-629 KRLLALGITG PEGHVLSHPE EVEGPSVLVW PECPHPQVEA EAVYRAVTVA ENSTTRP00000006167/1-571 KRLLEIGITG PEGHVLSRPE E--------- -------VEA EAVYRAVTVA 301 350 ENSBTAP00000023643/1-572 RQASCPLYVT KVMSKAAADV IARAKRRGVV VFGEPISAGL GADGSHYWSK ENSP00000339850/1-572 KQANCPLYVT KVMSKGAADA IAQAKRRGVV VFGEPITASL GTDGSHYWSK BACU004774/1-509 KQANCPLYVT KVMSKAAADV IAQAKRRGVV VVGEPITAGL GTDGSHYWSK bmy_09739T0/1-629 KQANCPLYIT KVMSKAAADV IAQAKRRGVV VVGEPITAGL GTDGSHYWSK ENSTTRP00000006167/1-571 KQANCPLYVT KKRSKAAADV IAQAKRRGVV VVGEPITASL GTDGSHYWGK 351 400 ENSBTAP00000023643/1-572 NWAKAAAFVT SPPISPDPST ADHLTALLSS GDLQVTGSAH CTFTTAQKAV ENSP00000339850/1-572 NWAKAAAFVT SPPVNPDPTT ADHLTCLLSS GDLQVTGSAH CTFTTAQKAV BACU004774/1-509 NWAKAAAFVT SPPLSPDPST ADHLASLLAS GDLQVTGSAH CTFTTAQKAV bmy_09739T0/1-629 NWAKAAAFVT SPPLNPDPST ADHLASLLSS GDLQVTGSAH CTFTTAQKAV ENSTTRP00000006167/1-571 NWAKAAAFVT SPPLNPDPST ADHLASLLSS GDLQVTGSAH CTFTTAQKAV 401 450 ENSBTAP00000023643/1-572 GRDNFTLIPE GTNGVEERMS VVWEKCVASG QMDENEFVAV TSTNAAKIFN ENSP00000339850/1-572 GKDNFALIPE GTNGIEERMS MVWEKCVASG KMDENEFVAV TSTNAAKIFN BACU004774/1-509 GRDNFMLIPE GTNGVEERMS VVWEKCVASG KMDENEFVAV TSTNAAKIFN bmy_09739T0/1-629 GRDNFTLIPE GTNGVEERMS VVWEKCVASG KMDENEFVAV TSTNAAKIFN ENSTTRP00000006167/1-571 GRDNFTLIPE GTNGVEERMS VVWEKCVASG KMDENEFVAV TSTNAAKIFN 451 500 ENSBTAP00000023643/1-572 FYPRKGRVAV GSDADLVIWN PRATRIISAK SHSLNVEYNI FEGLECRGAP ENSP00000339850/1-572 FYPRKGRVAV GSDADLVIWN PKATKIISAK THNLNVEYNI FEGVECRGAP BACU004774/1-509 FYPRKGRVAV GADADLVIWN PKATKIISAQ SHNLNVEYNI FEGVECRGAP bmy_09739T0/1-629 FYPRKGRVAV GADADLVIWN PKATKIISAQ SHNLNVEYNI FEGVECRGAP ENSTTRP00000006167/1-571 FYPRKGRVAV GADADLVIWN PKATKVMSAQ SHHLNVEYNI FEGVECRGAP 501 550 ENSBTAP00000023643/1-572 SVVISQGRVV LEDGALCVTP GTGRFIPRKT FPDFVYKRIK ARNRLAEIHG ENSP00000339850/1-572 AVVISQGRVA LEDGKMFVTP GAGRFVPRKT FPDFVYKRIK ARNRLAEIHG BACU004774/1-509 VVVISQGRVV LEDGALFVTP GTGRFIPRKT FPDFVYKRIK ARNRLAEIHG bmy_09739T0/1-629 VVVISQGRVV LEDGALFVTP GAGRFIPRKT FPDFVYKRIK ARNRLAEIHG ENSTTRP00000006167/1-571 VVVISQGRVV LEDGALFVTP GSGRFIPRKT FPDFVYKRIK ARNRLAEIHG 551 600 ENSBTAP00000023643/1-572 VPRGLYDGPV HEVMAPTKPG AGSQARASCP GKISVPPFRN LHQSGFSLSG ENSP00000339850/1-572 VPRGLYDGPV HEVMVPAKPG SGAPARASCP GKISVPPVRN LHQSGFSLSG BACU004774/1-509 VPRGRYDGLA HEVLVPAKPG GGVQAPASCP GKASAPPTRS PQQSGFSLSG bmy_09739T0/1-629 VPRGLYDGLV HEVMVPTKPG GSVQARVSCP GKISVPPVRN LHQSGFSLSG ENSTTRP00000006167/1-571 VPRGLYDGLV HEVMVPTKPG AGVQARA-CP GKISVPPVRN LHQSGFSLSG 601 650 ENSBTAP00000023643/1-572 SQADDHIARR TAQKIMAPPG GRSHITSLS ENSP00000339850/1-572 SQADDHIARR TAQKIMAPPG GRSNITSLS BACU004774/1-509 APAGDHVARR AAQRIIAPPG GRSSITSLA bmy_09739T0/1-629 SQADDHVARR TAQKIMAPPG GRSNITSLS ENSTTRP00000006167/1-571 SQADDHIARR TAQKIMAPPG GRSNITSLS