KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:21:17 2014 Check: 00 .. Name: ENSP00000347742/1-505 Len: 567 Check: 2106 Weight: 1.00 Name: ENSBTAP00000023657/1-505 Len: 567 Check: 2719 Weight: 1.00 Name: ENSTTRP00000005163/1-473 Len: 567 Check: 1488 Weight: 1.00 Name: bmy_03243T0/1-258 Len: 567 Check: 7232 Weight: 1.00 // 1 50 ENSP00000347742/1-505 ---------- -------MEK AADLQDTASL TLK------- -------FKF ENSBTAP00000023657/1-505 ---------- -------MEA AADLQDTATL ALK------- -------FEF ENSTTRP00000005163/1-473 LVTPPLGNRF LSPEPPGLHT ASRLLGNHSL CLPLITALGS SGGRGQAFPV bmy_03243T0/1-258 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000347742/1-505 NPKLGIDNPV LSLAEDH--- ---------- ---------- --------DP ENSBTAP00000023657/1-505 NPKLGIDNPV LSLAEDY--- ---------- ---------- --------NP ENSTTRP00000005163/1-473 PATLPVSPPA QYLTGQKLSG VLSQGRVCQT QGLVLGLSPL LPLFCCPPPL bmy_03243T0/1-258 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000347742/1-505 YDPWSLERPR FCLLSKEEGK SFGFHLQQEL GRAGHVVCRV DPGTSAQRQG ENSBTAP00000023657/1-505 SDIWSLERPR FYLLNKEEGR TFGFHLQQQL GRAGHVVCRV EPGSSAQRQG ENSTTRP00000005163/1-473 PDLWSLERPR FYLLNREEGR SFGFHLQQQR GRAGHVVCRV EPGTSAQRQG bmy_03243T0/1-258 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000347742/1-505 LQEGDRILAV NNDVVEHEDY AVVVRRIRAS SPRVLLTVLA RHAHDVARAQ ENSBTAP00000023657/1-505 LREGDWILGV NNHVVEHEDY LMVIRRIRAS GPRVLLTVLA QHVHEVARAQ ENSTTRP00000005163/1-473 LREGDCILGV NNHVVEHEDY SVVIRRIRAS GPRVLLTVLA QHVREVARAQ bmy_03243T0/1-258 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000347742/1-505 LGEDAHLCPT LGPGVRPRLC HIVKDEGGFG FSVTHGNQGP FWLVLSTGGA ENSBTAP00000023657/1-505 RGNNTHLCPP LGQGVRPRLC HVVKDEGGFG FSVTQGHRGP FWLVLSPGGA ENSTTRP00000005163/1-473 QGNDAHLCPT LGRGVRPRLC HIVKDEGGFG FSITQGHRGP FWLVLSTGGA bmy_03243T0/1-258 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000347742/1-505 AERAGVPPGA RLLEVNGVSV EKFTHNQLTR KLWQSGQQVT LLVAGPEVEE ENSBTAP00000023657/1-505 AERAGVPPGA RLLEVNGVSV EKLTHNQLNR KLWQSGKQVT LLVAGPEVEE ENSTTRP00000005163/1-473 AEQAGVPPGA RLLEVNGVSV EKFTHTQLSK KLWQSGKQVT LLVAGPEVEE bmy_03243T0/1-258 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000347742/1-505 QCRQLGLPLA APLAEGWALP TKPRCLHLEK GPQGFGFLLR EEKGLDGRPG ENSBTAP00000023657/1-505 QCRQLGMPLA APLAEGWALP TKPRCLHLEK GPQGFGFVLR EEKGLDGRLG ENSTTRP00000005163/1-473 QCRQLGMPLA APLAEGWALP TKPRCLHLEK GPQGFGFVLR EEKGLAGRLG bmy_03243T0/1-258 ------MPLA APLAEGWALP TKPRCLHLEK GPQGFGFMLR EEKGLDGRLG 351 400 ENSP00000347742/1-505 QFLWEVDPGL PAKKAGMQAG DRLVAVAGES VEGLGHEETV SRIQGQGSCV ENSBTAP00000023657/1-505 QFLWEVDPGL PAEKAGMQAG DRLVAVAGES VEGLGHEETV SKIRAQGSCV ENSTTRP00000005163/1-473 QFLWEVDPGL PAEKAGMQAG DRLVAVAGES VEGLGHEETV SKIRAQGSCV bmy_03243T0/1-258 QFLWEVDPGL PAEKAGMQAG DRLVAVAGES VEGLGHEETV SKIRAQGSCV 401 450 ENSP00000347742/1-505 SLTVVDPEAD RFFSMVRLSP LLFLENTEAP ASPRGSSSAS LVETEDPSLE ENSBTAP00000023657/1-505 SLIVVDPKAD RFFSMVRLSP LLFLESTEAP DSPWGSGLAS VVETKNPLVK ENSTTRP00000005163/1-473 LLIVVDPEAD RFFNMVRLSP LLFLESTEAP DSPQDTGSAS LVETRDPPVE bmy_03243T0/1-258 SLIVVDPEAD RFFNMVRLSP LLFLESTEAP DSPQDTGSAS LVETKDPPVE 451 500 ENSP00000347742/1-505 DTSVPSVPLG SRQCFLYPGP GGSYGFRLSC VASGPRLFIS QVTPGGSAAR ENSBTAP00000023657/1-505 DATVAAVPCN FRQCFLYPGP GGGYGFRLSC VASRPGLFIS QVTLGGSAAQ ENSTTRP00000005163/1-473 DTTV---PRG FRQCCLYPGP GGGYGS---- ---------- ---------- bmy_03243T0/1-258 DTTV---PCG FRQCFLYPGP GGGYGFRLSC VASGPHLFIS QVTLGGSAAR 501 550 ENSP00000347742/1-505 AGLQVGDVIL EVNGYPVGGQ NDLERLQQLP EAEPPLCLKL AARSLRGLEA ENSBTAP00000023657/1-505 AGLQTGDMIL EVNGYPMGGE KDQERLQQLA EAKPPLCLKL AAQSQQGLEA ENSTTRP00000005163/1-473 ---------- ---------- ---------- ---------- ---------- bmy_03243T0/1-258 AGLQMGDVIL EVNGYPMGGE NDLERLQQLA EAEPPLCLKL AARSQQGLEA 551 600 ENSP00000347742/1-505 WIPPGAAEDW ALASDLL ENSBTAP00000023657/1-505 WIPPGSREDG VLASDLL ENSTTRP00000005163/1-473 ---------- ------- bmy_03243T0/1-258 WIPPGSGEDW AVASDLL