KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:21:19 2014 Check: 00 .. Name: ENSP00000360107/1-640 Len: 723 Check: 6956 Weight: 1.00 Name: ENSTTRP00000014425/1-640 Len: 723 Check: 3910 Weight: 1.00 Name: ENSBTAP00000023678/1-640 Len: 723 Check: 4795 Weight: 1.00 Name: bmy_03087T0/1-723 Len: 723 Check: 944 Weight: 1.00 Name: BACU015858/1-640 Len: 723 Check: 5561 Weight: 1.00 // 1 50 ENSP00000360107/1-640 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014425/1-640 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000023678/1-640 ---------- ---------- ---------- ---------- ---------- bmy_03087T0/1-723 PRPERGAARP ARCGHTPARA PSPAGGARAD PARLRLRPDP SSVSARDVWR BACU015858/1-640 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000360107/1-640 ---------- ---------- ---------- ---MVSNPVH GLPFLPGTSF ENSTTRP00000014425/1-640 ---------- ---------- ---------- ---MMSNPVH GLPCLPGMSF ENSBTAP00000023678/1-640 ---------- ---------- ---------- ---MVSNPVH GLPFLPGTSF bmy_03087T0/1-723 YQGAAGALEN AAGPCGNPGG PNPTEVAAAR AAAMMSNPVH GLPFLPGTSF BACU015858/1-640 ---------- ---------- ---------- ---MMSNPVH GLPFLPGTSF 101 150 ENSP00000360107/1-640 KDSTKTAFHR SQTLSYRNGY AIVRRPTVGI GGDRLQFNQL SQAELDELAS ENSTTRP00000014425/1-640 KDSTXXXXXX XQTLGYRNGY AVVRHPTVGI SGDRLQVSQL SQAELDKLAS ENSBTAP00000023678/1-640 KDLTKTAFHR SQTLGYRNGY AVVRRPTVGI GGDRLQVNQL SQADLDELAS bmy_03087T0/1-723 KDSTKTAFHR SQTLGYRNGY AVVRRPTVGI GGDRLQVSQL SQAELDELAS BACU015858/1-640 KDSTKTAFHR SQTLGYRNGY AVVRRPTVGI GGDRLQVSQL SQAELDELAS 151 200 ENSP00000360107/1-640 KAPVLTYGQP KQAPPADFIP AHVAFDKKVL KFDAYFQEDV PMSTEEQYRI ENSTTRP00000014425/1-640 KAPVLTYGQP KQAPRAEFIP AYVAFDKKVL KFDAYFQEDV PLSTEEHYRI ENSBTAP00000023678/1-640 KIPILTYGQA RQAPPAAFVP AHVAFDKKVL KFDAYFQEDV PMSIEEHYRI bmy_03087T0/1-723 KAPVLAYGQP KQAPRAEFIP AYVAFDKKVL KFDAYFQEDV PLSTEERYRI BACU015858/1-640 KAPVLAYGQP KQAPRAEFIP AYVAFDKKVL KFDAYFQEDV PLSTEERYRI 201 250 ENSP00000360107/1-640 RQVNIYYYLE DDSMSVIEPV VENSGILQGK LIKRQRLAKN DRGDHYHWKD ENSTTRP00000014425/1-640 RQVNIYYHLE DDSMSVIEPV VENSGIPQGK LIKRQRLAKN DRGDHYHWKD ENSBTAP00000023678/1-640 RQVHIYYYLE DDSMSVIEPV VENSGIPQGK LIKRQRLSKN DRGDHYHWKD bmy_03087T0/1-723 RRVNIYYYLE DDSMSVIEPV VENSGIPQGK LIKRQRLAKN DRGDHYHWKD BACU015858/1-640 RRVNIYYYLE DDSMSVIEPV VENSGIPQGK LIKRQRLAKN DRGDHYHWKD 251 300 ENSP00000360107/1-640 LNRGINITIY GKTFRVVDCD QFTQVFLESQ GIELNPPEKM ALDPYTELRK ENSTTRP00000014425/1-640 LNRGINITIY GRTFRIVDCD KFTQVFLESQ GIELNPPEKM ALDPYTELRK ENSBTAP00000023678/1-640 LNRGINITIY GKTFRIVDCD KFTQVFLESQ GIELNPPEKM ALDPYTELRK bmy_03087T0/1-723 LNRGINITIY GRTFRIVDCD KFTQIFLESQ GIELNPPEKM ALDPYTELRK BACU015858/1-640 LNRGINITIY GRTFRIVDCD KFTQVFLESQ GIELNPPEKM ALDPYTELRK 301 350 ENSP00000360107/1-640 QPLRKYVTPS DFDQLKQFLT FDKQVLRFYA IWDDTDSMYG ECRTYIIHYY ENSTTRP00000014425/1-640 XXXXXXXXXX XXXXXXXXXX XXXXVLRFYA IWDDTDSMFG ECRTYVIHYY ENSBTAP00000023678/1-640 QPLRKYVTPT DFDQLKQFLT FDKQVLRFYA IWDDTDSMFG ECRTYIIHYY bmy_03087T0/1-723 QPLRKYVTPT DFDQLKQFLT FDKQVLRFYA IWDDTDSMFG ECRTYIIHYY BACU015858/1-640 QPLRKYVTPT DFDQLKQFLT FDKQVLRFYA IWDDTDSMFG ECRTYIIHYY 351 400 ENSP00000360107/1-640 LMDDTVEIRE VHERNDGRDP FPLLMNRQRV PKVLVENAKN FPQCVLEISD ENSTTRP00000014425/1-640 LMDDTVEIRE VHERNDGRDP FPLLMSRQRM PKVLVENAKN FPRCVLEISD ENSBTAP00000023678/1-640 LMDDTVEIRE VHERNDGRDP FPLLMNRQRM PKVLVENAKN FPRCVLEISD bmy_03087T0/1-723 LMDDTVEIRE VHERNDGRDP FPLLMSRQRM PKVLVENAKN FPRCVLEISD BACU015858/1-640 LTDDTVEIRE VHERNDGRDP FPLLMSRQRM PKVLVENAKN FPRCVLEISD 401 450 ENSP00000360107/1-640 QEVLEWYTAK DFIVGKSLTI LGRTFFIYDC DPFTRRYYKE KFGITDLPRI ENSTTRP00000014425/1-640 KEVLEWYTAK DFIVGKPLTI LGRTFFIYDC DPFTRQYYKE KFGISDLPRI ENSBTAP00000023678/1-640 KEVLEWYTAK DFIVGKPLTI LGRTFFIYDC DPFTRQYYQE KFGISDLPRI bmy_03087T0/1-723 KEVLEWYTAK DFIVGKPLTI LGRTFFIYDC DPFTRQYYKE KFGISDLPRI BACU015858/1-640 KEVLEWYTAK DFIVGKPLTI LGRTFFIYDC DPFTRQYYKE KFGISDLPRI 451 500 ENSP00000360107/1-640 DVSKREPPPV KQELPPYNGF GLVEDSAQNC FALIPKAPKK DVIKMLVNDN ENSTTRP00000014425/1-640 DVSKKEPPPV KQELPPYNGY GLVEDSAQNC FALIPKPPKK DVIKMLMNEN ENSBTAP00000023678/1-640 DMSKKEPPPM KQELPPYNGF GLIEDSAQNC FALIPKAPQK DVIKMLMNEN bmy_03087T0/1-723 DVSKKEPPPV KQELPPYNGY GLVEDSAQNC FALIPKAPKK DVIKMLMNEN BACU015858/1-640 DVSKKEPPPV KQELPPYNGY GLVEDSAQNC FALIPKAPKK DVIKMLMNEN 501 550 ENSP00000360107/1-640 KVLRYLAVLE SPIPEDKDRR FVFSYFLATD MISIFEPPVR NSGIIGGKYL ENSTTRP00000014425/1-640 KVLRYLAALE SPIPEDKDRR FVFSYFLATD MISIFEPPVR NSGIIGGKYL ENSBTAP00000023678/1-640 KVLRYLATLE SPFPEDKGRR FVLSYFLATD MISIFEPPVR NSGIIGGKYL bmy_03087T0/1-723 KVLRYLAALE SPIPEDKDRR FVFSYFLATD MISIFEPPVR NSGIIGGKYL BACU015858/1-640 KVLRYLAALE SPIPEDKDRR FVFSYFLATD MISIFEPPVR NSGIIGGKYL 551 600 ENSP00000360107/1-640 GRTKVVKPYS TVDNPVYYGP SDFFIGAVIE VFGHRFIILD TDEYVLKYME ENSTTRP00000014425/1-640 GRTKVVKPGS SVENPIYYSP SDFFIGAVIE VFGHRFVILD TDDCVLKYME ENSBTAP00000023678/1-640 GRTKVVKPGS SVENPVYYGP SDFFIGAVIE VFGHRFVILD TDDYVLKYME bmy_03087T0/1-723 GRTKVVKPGS SVENPIYYGP SDFFIGAVIE VFGHRFVILD TDDCVLKYME BACU015858/1-640 GRTKVVKPGS SVENPIYYGP SDFFIGAVIE VFGHQFVILD TDDCVLKYME 601 650 ENSP00000360107/1-640 SNAAQYSPEA LASIQNHVRK REAPAPEAES KQTEKDPGVQ ELEALIDTIQ ENSTTRP00000014425/1-640 SNAAQYSPEA LLSIQSRVRK QEAPAPELDN QQTEEDPGVQ ELEALIDTIQ ENSBTAP00000023678/1-640 SNAAQYSPEA LLSIQNHIRK QEAPAPELDG QQAEEDPGVR DLEALIDTIQ bmy_03087T0/1-723 SNAAQYSPEA LLSIQNHVRK QEAPAPELDN QQTEEDPGVQ ELEALIDTIQ BACU015858/1-640 RNAAQYSPEA LLSIQNRGRN QEAPAPELDN QQTEEDPGVQ ELEALIDTIQ 651 700 ENSP00000360107/1-640 KQLKDHSCKD NIREAFQIYD KEASGYVDRD MFFKICESLN VPVDDSLVKE ENSTTRP00000014425/1-640 RQGKDHPCRD NICKMFQIYD KEASGHVDRE TFFKICDSFH LPVDDSLVKE ENSBTAP00000023678/1-640 KQLKDRPCRD NIREAFQIYD KEASGYVDRE TFFKICGSYQ LPVDDSLIKE bmy_03087T0/1-723 KQGKDRPCRD NIRKMFQIYD KEASGHVDRE TFFKICDSFH LPVDDSLVKE BACU015858/1-640 KQGKDRPCRD NICKMFQIYD KEASGHVDRE TFFKICDSFH LPVDDSLVKE 701 750 ENSP00000360107/1-640 LIRMCSHGEG KINYYNFVRA FSN ENSTTRP00000014425/1-640 LIRMCSHGED KIDYYNFVRA FSN ENSBTAP00000023678/1-640 LIRMCSHGED KIDYYNFVRA FSN bmy_03087T0/1-723 LIRMCSHGED KIDYYNFVRA FSN BACU015858/1-640 LIRMCSHGED KIDYYNFVRA FSN