KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:21:20 2014 Check: 00 .. Name: ENSTTRP00000011538/1-1338 Len: 1398 Check: 1759 Weight: 1.00 Name: ENSBTAP00000023680/1-1295 Len: 1398 Check: 3667 Weight: 1.00 Name: bmy_11947T0/1-1349 Len: 1398 Check: 4740 Weight: 1.00 Name: ENSP00000303427/1-1337 Len: 1398 Check: 1127 Weight: 1.00 Name: BACU007637/1-1338 Len: 1398 Check: 2018 Weight: 1.00 // 1 50 ENSTTRP00000011538/1-1338 MDFSTAQPKP APALCGVVSA DGKIAYPPGV KEITDKITTD EMIKRLKXXX ENSBTAP00000023680/1-1295 ---------- ---------- ---------- ---------- -----LQMVV bmy_11947T0/1-1349 ---------- ---------- ---------- -MVETAVLEN LPNKSCLMVV ENSP00000303427/1-1337 MDF-TAQPKP ATALCGVVSA DGKIAYPPGV KEITDKITTD EMIKRLKMVV BACU007637/1-1338 MDFSTAQPKP APALCGVVSA DGKIAYPPGV KEITDKITTD EMIKRLKMVV 51 100 ENSTTRP00000011538/1-1338 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000023680/1-1295 KTFMDMDQDS EDEKQQYLPL ALHLASEFFL RNPNKDVRLL VACCLADIFR bmy_11947T0/1-1349 KTFMDMDQDS EDEKQQYLPL ALHLASEFFL RNPNKDVRLL VACCLADIFR ENSP00000303427/1-1337 KTFMDMDQDS EDEKQQYLPL ALHLASEFFL RNPNKDVRLL VACCLADIFR BACU007637/1-1338 KTFMDMDQDS EDEKQQYLPL ALHLASEFFL RNPNKDVRLL VACCLADIFR 101 150 ENSTTRP00000011538/1-1338 XXXXXXXXXX XXXXXDIFLF ITRQLKGLED TRSPQFHRYF YLLENLAWVK ENSBTAP00000023680/1-1295 IYAPEAPYTS HDKLKDIFLF ITRQLKGLED TKSPQFNRYF YLLENLAWVK bmy_11947T0/1-1349 IYAPEAPYTS HDKLKDIFLF ITRQLKGLED TKSPQFNRYF YLLENLAWVK ENSP00000303427/1-1337 IYAPEAPYTS HDKLKDIFLF ITRQLKGLED TKSPQFNRYF YLLENLAWVK BACU007637/1-1338 IYAPEAPYTS HDKLKDIFLF ITRQLKGLED TKSPQFNRYF YLLENLAWVK 151 200 ENSTTRP00000011538/1-1338 SYNICFELED CNEIFIQLFR TLFSVINNSH NRKVQMHMLD LMSSIIMEGD ENSBTAP00000023680/1-1295 SYNICFELED CNEIFIQLFR TLFSVINNSH NKKVQMHMLD LMSSIIMEGD bmy_11947T0/1-1349 SYNICFELED CNEIFIQLFR TLFSVINNSH NKKVQMHMLD LMSSIIMEGD ENSP00000303427/1-1337 SYNICFELED CNEIFIQLFR TLFSVINNSH NKKVQMHMLD LMSSIIMEGD BACU007637/1-1338 SYNICFELED CNEIFIQLFR TLFSVINNSH NKKVQMHMLD LMSSIIMEGD 201 250 ENSTTRP00000011538/1-1338 GVTQELLDSI LINLIPAHKN LNKQSFDLAK VLLKRTVQTI EACIANFFNQ ENSBTAP00000023680/1-1295 GVTQELLDSI LINLIPAHKN LNKQSFDLAK VLLKRTVQTI EACIANFFNQ bmy_11947T0/1-1349 GVTQELLDSI LINLIPAHKN LNKQSFDLAK VLLKRTVQTI EACIANFFNQ ENSP00000303427/1-1337 GVTQELLDSI LINLIPAHKN LNKQSFDLAK VLLKRTVQTI EACIANFFNQ BACU007637/1-1338 GVTQELLDSI LINLIPAHKN LNKQSFDLAK VLLKRTVQTI EACIANFFNQ 251 300 ENSTTRP00000011538/1-1338 VLVLGRSSVS DLSEHVFDLI QELFAIDPHL LLSVMPQLEF KLKSNDGEER ENSBTAP00000023680/1-1295 VLVLGRSSVS DLSEHVFDLI QELFAIDPHL LLSVMPQLEF KLKDNHTQER bmy_11947T0/1-1349 VLVLGRSSVS DLSEHVFDLI QELFAIDPHL LLSVMPQLEF KLKSNDGEER ENSP00000303427/1-1337 VLVLGRSSVS DLSEHVFDLI QELFAIDPHL LLSVMPQLEF KLKSNDGEER BACU007637/1-1338 VLVLGRSSVS DLSEHVFDLI QELFAIDPHL LLSVMPQLEF KLKSNDGEER 301 350 ENSTTRP00000011538/1-1338 L-AVVRLLAK LFGSKDSDL- ATQNRPLWQC FLGRFNDIHV PVRLESVKIA ENSBTAP00000023680/1-1295 LKSVIKLLFS LLSERDSNIV ATAKRAITVC FVYRFNDIHV PVRLESVKFA bmy_11947T0/1-1349 L-AVVRLLAK LFGSKDSDL- ATQNRPLWQC FLGRFNDIHV PVRLESVKFA ENSP00000303427/1-1337 L-AVVRLLAK LFGSKDSDL- ATQNRPLWQC FLGRFNDIHV PVRLESVKFA BACU007637/1-1338 L-AVVRLLAK LFGSKDSDL- ATQNRPLWQC FLGRFNDIHV PVRLESVKFA 351 400 ENSTTRP00000011538/1-1338 SHCLMNHPDL AKDLTEYLKV RSHDPEEAIR HDVIVTIITA AKRDLALVND ENSBTAP00000023680/1-1295 SHCLMNHPDL AKDLTEYLVV NYHLPSPQTR FQVLPFLLLL PFRNISLLLL bmy_11947T0/1-1349 SHCLMNHPDL AKDLTEYLKV RSHDPEEAIR HDVIVTIITA AKRDLALVND ENSP00000303427/1-1337 SHCLMNHPDL AKDLTEYLKV RSHDPEEAIR HDVIVTIITA AKRDLALVND BACU007637/1-1338 SHCLMNHPDL AKDLTEYLKV RSHDPEEAIR HDVIVTIITA AKRDLALVND 401 450 ENSTTRP00000011538/1-1338 QLLGFVRERT LDKRWRVRKE AMMGLAQLYK KYCLHGEAGK EAAEKVSWIK ENSBTAP00000023680/1-1295 KKIAFLNFVF SKKWWRVRKE AMMGLAQLYK KYCLHGEAGK EAAEKVSWIK bmy_11947T0/1-1349 QLLGFVRERT LDKRWRVRKE AMMGLAQLYK KYCLHGEAGK EAAEKVSWIK ENSP00000303427/1-1337 QLLGFVRERT LDKRWRVRKE AMMGLAQLYK KYCLHGEAGK EAAEKVSWIK BACU007637/1-1338 QLLGFVRERT LDKRWRVRKE AMMGLAQLYK KYCLHGEAGK EAAEKVSWIK 451 500 ENSTTRP00000011538/1-1338 DKLLHIYYQN SIDDKLLVEK IFAQYLVPHN LETEERMKCL YYLYASLDPN ENSBTAP00000023680/1-1295 DKLLHIYYQN SIDDKLLVEK IFAQYLVPHN LETEERMKCL YYLYASLDPN bmy_11947T0/1-1349 DKLLHIYYQN SIDDKLLVEK IFAQYLVPHN LETEERMKCL YYLYASLDPN ENSP00000303427/1-1337 DKLLHIYYQN SIDDKLLVEK IFAQYLVPHN LETEERMKCL YYLYASLDPN BACU007637/1-1338 DKLLHIYYQN SIDDKLLVEK IFAQYLVPHN LETEERMKCL YYLYASLDPN 501 550 ENSTTRP00000011538/1-1338 AVKALNEMWK CQNMLRSHVR ELLDLHKQPT SEANCSAMFG KLMTIAKNLP ENSBTAP00000023680/1-1295 AVKALNEMWK CQNMLRSHVR ELLDLHKQPT SEANCSAMFG KLMTIAKNLP bmy_11947T0/1-1349 AVKALNEMWK CQNMLRSHVR ELLDLHKQPT SEANCSAMFG KLMTIAKNLP ENSP00000303427/1-1337 AVKALNEMWK CQNMLRSHVR ELLDLHKQPT SEANCSAMFG KLMTIAKNLP BACU007637/1-1338 AVKALNEMWK CQNMLRSHVR ELLDLHKQPT SEANCSAMFG KLMTIAKNLP 551 600 ENSTTRP00000011538/1-1338 DPGKAQDFVK KFNQVLGDDE KLRSQLELLI SPTCSCKQAD VCVREIARKL ENSBTAP00000023680/1-1295 DPGKAQDFVK KFNQVLGDDE KLRSQLELLI SPTCSCKQAD VCVREIARKL bmy_11947T0/1-1349 DPGKAQDFVK KFNQVLGDDE KLRSQLELLI SPTCSCKQAD VCVREIARKL ENSP00000303427/1-1337 DPGKAQDFVK KFNQVLGDDE KLRSQLELLI SPTCSCKQAD ICVREIARKL BACU007637/1-1338 DPGKAQDFVK KFNQVLGDDE KLRSQLELLI SPTCSCKQAD VCVREIARKL 601 650 ENSTTRP00000011538/1-1338 ANPKQPTNPF LEMVKFLLER IAPVHIDSEA ISALVKLMNK SIEGTADDEE ENSBTAP00000023680/1-1295 ANPKQPTNPF LEMVKFLLER IAPVHIDSEA ISALVKLMNK SIEGTADDEE bmy_11947T0/1-1349 ANPKQPTNPF LEMVKFLLER IAPVHIDSEA ISALVKLMNK SIEGTADDEE ENSP00000303427/1-1337 ANPKQPTNPF LEMVKFLLER IAPVHIDSEA ISALVKLMNK SIEGTADDEE BACU007637/1-1338 ANPKQPTNPF LEMVKFLLER IAPVHIDSEA ISALVKLMNK SIEGTADDEE 651 700 ENSTTRP00000011538/1-1338 EGVSPDTAIR SGLELLKVLS FTHPTSFHSA ETYESLLQCL RMEDDKVAEA ENSBTAP00000023680/1-1295 EGVSPDTAIR SGLELLKVLS FTHPTSFHSA ETYESLLQCL RMEDDKVAEA bmy_11947T0/1-1349 EGVSPDTAIR SGLELLKVLS FTHPTSFHSA ETYESLLQCL RMEDDKVAEA ENSP00000303427/1-1337 EGVSPDTAIR SGLELLKVLS FTHPTSFHSA ETYESLLQCL RMEDDKVAEA BACU007637/1-1338 EGVSPDTAIR SGLELLKVLS FTHPTSFHSA ETYESLLQCL RMEDDKVAEA 701 750 ENSTTRP00000011538/1-1338 AIQIFRNTGH KIETDLPQIR STLIPILHQK AKRGTPHQAK QAVHCIHAIF ENSBTAP00000023680/1-1295 AIQIFRNTGH KIETDLPQIR STLIPILHQK AKRGTPHQAK QAVHCIHAIF bmy_11947T0/1-1349 AIQIFRNTGH KIETDLPQIR STLIPILHQK AKRGTPHQAK QAVHCIHAIF ENSP00000303427/1-1337 AIQIFRNTGH KIETDLPQIR STLIPILHQK AKRGTPHQAK QAVHCIHAIF BACU007637/1-1338 AIQIFRNTGH KIETDLPQIR STLIPILHQK AKRGTPHQAK QAVHCIHAIF 751 800 ENSTTRP00000011538/1-1338 TNKEVQLAQI FEPLSRSLNA DVPEQLITPL VSLGHISMLA PDQFASPMKS ENSBTAP00000023680/1-1295 TNKEVQLAQI FEPLSRSLNA DVPEQLITPL VSLGHISMLA PDQFASPMKS bmy_11947T0/1-1349 TNKEVQLAQI FEPLSRSLNA DVPEQLITPL VSLGHISMLA PDQFASPMKS ENSP00000303427/1-1337 TNKEVQLAQI FEPLSRSLNA DVPEQLITPL VSLGHISMLA PDQFASPMKS BACU007637/1-1338 TNKEVQLAQI FEPLSRSLNA DVPEQLITPL VSLGHISMLA PDQFASPMKS 801 850 ENSTTRP00000011538/1-1338 VVANFIVKDL LMNDRSTGEK NGKLWSPDEE VSPEVLAKVQ AIKLLVRWLL ENSBTAP00000023680/1-1295 VVANFIVKDL LMNDRSTGEK NGKLWSPDEE VSPEVLAKVQ AIKLLVRWLL bmy_11947T0/1-1349 VVANFIVKDL LMNDRSTGEK NGKLWSPDEE VSPEVLAKVQ AIKLLVRWLL ENSP00000303427/1-1337 VVANFIVKDL LMNDRSTGEK NGKLWSPDEE VSPEVLAKVQ AIKLLVRWLL BACU007637/1-1338 VVANFIVKDL LMNDRSTGEK NGKLWSPDEE VSPEVLAKVQ AIKLLVRWLL 851 900 ENSTTRP00000011538/1-1338 GMKNNQSKSA NSTLRLLSAM LVSEGDLTEQ KKISKSDMSR LRLAAGSAIM ENSBTAP00000023680/1-1295 GMKNNQSKSA NSTLRLLSAM LVSEGDLTEQ KRISKSDMSR LRLAAGSAIM bmy_11947T0/1-1349 GMKNNQSKSA NSTLRLLSAM LVSEGDLTEQ KKISKSDMSR LRLAAGSAIM ENSP00000303427/1-1337 GMKNNQSKSA NSTLRLLSAM LVSEGDLTEQ KRISKSDMSR LRLAAGSAIM BACU007637/1-1338 GMKNNQSKSA NSTLRLLSAM LVSEGDLTEQ KKISKSDMSR LRLAAGSAIM 901 950 ENSTTRP00000011538/1-1338 KLAQEPCYHE IITPEQFQLC ALVINDECYQ VRQIFAQKLH KALVKLLLPL ENSBTAP00000023680/1-1295 KLAQEPCYHE IITPEQFQLC ALVINDECYQ VRQIFAQKLH KALVKLLLPL bmy_11947T0/1-1349 KLAQEPCYHE IITPEQFQLC ALVINDECYQ VRQIFAQKLH KALVKLLLPL ENSP00000303427/1-1337 KLAQEPCYHE IITPEQFQLC ALVINDECYQ VRQIFAQKLH KALVKLLLPL BACU007637/1-1338 KLAQEPCYHE IITPEQFQLC ALVINDECYQ VRQIFAQKLH KALVKLLLPL 951 1000 ENSTTRP00000011538/1-1338 EYMAIFALCA KDPVKERRAH ARQCLLKNIS IRREYIKQNP MATEKLLSLL ENSBTAP00000023680/1-1295 EYMAIFALCA KDPVKERRAH ARQCLLKNIS IRREYIKQNP MATEKLLSLL bmy_11947T0/1-1349 EYMAIFALCA KDPVKERRAH ARQCLLKNIS IRREYIKQNP MATEKLLSLL ENSP00000303427/1-1337 EYMAIFALCA KDPVKERRAH ARQCLLKNIS IRREYIKQNP MATEKLLSLL BACU007637/1-1338 EYMAIFALCA KDPVKERRAH ARQCLLKNIS IRREYIKQNP MATEKLLSLL 1001 1050 ENSTTRP00000011538/1-1338 PEYVVPYMIH LLAHDPDFTR SQDVDQLRDI KECLWFMLEV LMTKNENNSH ENSBTAP00000023680/1-1295 PEYVVPYMIH LLAHDPDFTR SQDVDQLRDI KECLWFMLEV LMTKNENNSH bmy_11947T0/1-1349 PEYVVPYMIH LLAHDPDFTR SQDVDQLRDI KECLWFMLEV LMTKNENNSH ENSP00000303427/1-1337 PEYVVPYMIH LLAHDPDFTR SQDVDQLRDI KECLWFMLEV LMTKNENNSH BACU007637/1-1338 PEYVVPYMIH LLAHDPDFTR SQDVDQLRDI KECLWFMLEV LMTKNENNSH 1051 1100 ENSTTRP00000011538/1-1338 AFMKKMAENI KLTKDAQSPD ESKTNEXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000023680/1-1295 AFMKKMAENI KLTKDAQSPD ESKTNEKLYT VCDVALCVIN SKSALCNAES bmy_11947T0/1-1349 AFMKKMAENI KLTKDAQSPD ESKTNEKLYT VCDVALCVIN SKSALCNADS ENSP00000303427/1-1337 AFMKKMAENI KLTRDAQSPD ESKTNEKLYT VCDVALCVIN SKSALCNADS BACU007637/1-1338 AFMKKMAENI KLTKDAQSPD ESKTNEKLYT VCDVALCVIN SKSALCNADS 1101 1150 ENSTTRP00000011538/1-1338 XXXXXXXXXX XXXXXXDFCN DKSYISEETR VLLLTGKPKP AGVLGAVNKP ENSBTAP00000023680/1-1295 PKDPVLPVKF FTQPEKDFCN DKSYISEETR VLLLTGKPKP AGVLGAVNKP bmy_11947T0/1-1349 PKDPVLPMKF FTQPEKDFCN DKSYISEETR VLLLTGKPKP AGVLGAVNKP ENSP00000303427/1-1337 PKDPVLPMKF FTQPEKDFCN DKSYISEETR VLLLTGKPKP AGVLGAVNKP BACU007637/1-1338 PKDPVLPMKF FTQPEKDFCN DKSYISEETR VLLLTGKPKP AGVLGAVNKP 1151 1200 ENSTTRP00000011538/1-1338 LSATGRKPYV RSTGAETGSN INVNSELNPS TGNRSREQSS EAAETGVSEN ENSBTAP00000023680/1-1295 LSATGRKPYV RSTGAETGSN INVNSELNPS TGNRPREQSS EAAETGVSEN bmy_11947T0/1-1349 LSATGRKPYV RSTGAETGSN IN-------- --------SS EAAETGVSEN ENSP00000303427/1-1337 LSATGRKPYV RSTGTETGSN INVNSELNPS TGNRSREQSS EAAETGVSEN BACU007637/1-1338 LSATGRKPYV RSTGAETGSN INVNSELNPS TGNRSREQSS EAAETGVSEN 1201 1250 ENSTTRP00000011538/1-1338 EENPVRIISV TPVKNIDPVK NKEINSDQAA QGNISSDRGK KRTVTAAGAE ENSBTAP00000023680/1-1295 EENPVRIISV TPVKNIDPVK NKEINSDQSA QGNISSDRGK KRTVTAAGAE bmy_11947T0/1-1349 EENPVRIISV TPVKNIDPVK NKEINSDQAA QGNISSDRGK KRTVTAAGAE ENSP00000303427/1-1337 EENPVRIISV TPVKNIDPVK NKEINSDQAT QGNISSDRGK KRTVTAAGAE BACU007637/1-1338 EENPVRIISV TPVKNIDPVK NKEINSDQAA QGNISSDRGK KRTVTAAGAE 1251 1300 ENSTTRP00000011538/1-1338 NIQQKTDEKV DESGPPAPSK PRRGRRPKSE SQGNATRNDD INKPLSKGRK ENSBTAP00000023680/1-1295 NIQQKTDEKA DESGPPAPSK PRRGRRPKSE SQGNATKNDD INKPLSKGRK bmy_11947T0/1-1349 NIQQKADEKV DESGPPAPSK PRRGRRPKSE SQGNATRNDD INKPLSKGRK ENSP00000303427/1-1337 NIQQKTDEKV DESGPPAPSK PRRGRRPKSE SQGNATKNDD LNKPINKGRK BACU007637/1-1338 NIQQKADEKV DESGPPAPSK PRRGRRPKSE SQGNATRNDD INKPLSKGRK 1301 1350 ENSTTRP00000011538/1-1338 RAAVNQESPG GLEAGNAKAP KLQDIAKKAA PAERQIDLQR ---------- ENSBTAP00000023680/1-1295 RAAVSQESPG GLEAGNAKAP KLQDTAKKAA PTERQIDLQR ---------- bmy_11947T0/1-1349 RAAVNQESPG GLEAGNAKAP KLQDIAKKAA PAERQIDLQR VKRHLRSLKY ENSP00000303427/1-1337 RAAVGQESPG GLEAGNAKAP KLQDLAKKAA PAERQIDLQR ---------- BACU007637/1-1338 RAAVNQESPG GLEAGNAKAP KLQDIAKKAA AAERQIDLQR ---------- 1351 1400 ENSTTRP00000011538/1-1338 ---------- ---------- ---------- ---------- -------- ENSBTAP00000023680/1-1295 ---------- ---------- ---------- ---------- -------- bmy_11947T0/1-1349 VSKKKIHLQR EKMKVKQKQA LASAKTWIQN DPEQKMKLTS KHTFCLEN ENSP00000303427/1-1337 ---------- ---------- ---------- ---------- -------- BACU007637/1-1338 ---------- ---------- ---------- ---------- --------