KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:21:21 2014 Check: 00 .. Name: ENSP00000313670/1-953 Len: 1051 Check: 4567 Weight: 1.00 Name: ENSTTRP00000016397/1-949 Len: 1051 Check: 425 Weight: 1.00 Name: ENSBTAP00000023681/1-953 Len: 1051 Check: 9043 Weight: 1.00 Name: bmy_05630T0/1-1022 Len: 1051 Check: 1382 Weight: 1.00 Name: BACU002447/1-960 Len: 1051 Check: 4266 Weight: 1.00 // 1 50 ENSP00000313670/1-953 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016397/1-949 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000023681/1-953 ---------- ---------- ---------- ---------- ---------- bmy_05630T0/1-1022 MDAKPRLLPG RPPPSTRSGT WRRGGDAGWG VEWPSGAGPE GAGPTWGGRP BACU002447/1-960 ---------- ---------- ---------- ---------- -------MRP 51 100 ENSP00000313670/1-953 ---------- ---------- ---------- ---------- --------MC ENSTTRP00000016397/1-949 ---------- ---------- ---------- ---------- --------MC ENSBTAP00000023681/1-953 ---------- ---------- ---------- ---------- --------MC bmy_05630T0/1-1022 RESNRGGFPG VRLRAAQAPL SWVQVEHEQG SLASSETPLR GPESGTLAMC BACU002447/1-960 CDT------- ---------- ---------- ---------- GPESGTLAMC 101 150 ENSP00000313670/1-953 NPEEAALLRL EEVFSATLAH VNSLVLQPLL PAAPDPSDPW GRECLRLLQQ ENSTTRP00000016397/1-949 SPEEAALLRL EEVFSATLAR INSFVLQPLL EAAPEPSDPW GRECLQLLQQ ENSBTAP00000023681/1-953 SPEEAALLRL EEVFSATLAR INSLVFQPLL EAGPEASDPW GRECLQLLQQ bmy_05630T0/1-1022 SPEEAALLRL EEVFSATLTR INSFVLQPLL EAAPEPSDPW GRECLRLLQQ BACU002447/1-960 SPEEAALLRL EEVFSATLAR INSFVLQPLL EAAPEPSDPW GRECLQLLQQ 151 200 ENSP00000313670/1-953 LHKSSQQLWE VTEESLHSLQ ERLRYPDSTG LESLLLLRGA DRVLQAHIEY ENSTTRP00000016397/1-949 LHRSSQQLWE VTEESLHSLQ ERLRHPDSIS LESLLLLHSA DRVLQVHLEY ENSBTAP00000023681/1-953 LHSSSQQLWD VTEESLHSLR ERLRRPEAVG LESLLLLQSA DRVLQVHLEY bmy_05630T0/1-1022 VHRSSQQLWE VTEESLHSLQ KRLRHPDSIS LESLLLLHSA DRVLQVHLEY BACU002447/1-960 LHRSSQQLWE VTEESLHSLQ KRLRHPDSIS LESLLLLHSA DRVLQVHLEY 201 250 ENSP00000313670/1-953 IESYTSCMVV QAFQKAAKRR SEYWRGQRKA LRQLLSGVSS EGSVGASLGQ ENSTTRP00000016397/1-949 IESYTSCVAV QAFQKAVKRR SEYWQGQRKA LQQFLSGMSS EGSVGTALVQ ENSBTAP00000023681/1-953 IESYTCCVAV QAFQKAVKRR SEYWRGQRKA LRQVLSGLSS EGSVGTALLQ bmy_05630T0/1-1022 LESYTSCVAV QAFQKAVKRR REYWQGQRKA LQQLLSGMNS EGSVGTALVQ BACU002447/1-960 LESYTSCVAV QAFQKAVKRR REYWQGQRKA LRQLLSGMNS EGSVGTALVQ 251 300 ENSP00000313670/1-953 ALHQPLAHHV QQYVLLLLSL GDTIGEHHPT RELVVNAVTL FGNLQSFMKQ ENSTTRP00000016397/1-949 ALRQPLTHHV QQCVLLLLSL RDTVGESHPT RELLVHAATV FGNLQSFTRQ ENSBTAP00000023681/1-953 ALRQPLAHHV QQYVLLLLSL GDTVGECHPT RELVIHAASL FGDLQSFMRQ bmy_05630T0/1-1022 ALRQPLTHHV QQYVLLLLSL GDTVGKRHPA RELLVHAATV FGSLQSFMRQ BACU002447/1-960 ALRQPLTHHV QQYVFLLLSL GDTVGEHHPA RELLVHAATV FGNLQSFMRQ 301 350 ENSP00000313670/1-953 ELDQAVATQA LWHTLRGRLR DVLCTPAHRL LQDSQDVPVT VAPLRAERVL ENSTTRP00000016397/1-949 ELEQAMATQA LWHTLSSRLR DVLCTPAHRL LQDSQDIPVT VTPLRAERVL ENSBTAP00000023681/1-953 ELDQATATQA LWPTLSSRLR DVLCTPARRL LQDSQDVPVT VTPLRAERVL bmy_05630T0/1-1022 ELDQAMATQA LWHTLSSRLR DVLCTPAHRL LQDSQDIPVT VTPLRAERVL BACU002447/1-960 ELDQAMATQA LWHTLSSRLR DVLCIPAHRL LQDSQDIPVT VTPLRAERVL 351 400 ENSP00000313670/1-953 LFDDALVLLQ GHNVHTFDLK LVWVDPGQDG CTFHLLTPEE EFSFCAKDSQ ENSTTRP00000016397/1-949 LFDDALVLLQ GHSVHTFDLK LVWVEPGQDG CMFHLLTPEE EFSLCSKDPQ ENSBTAP00000023681/1-953 LFDDALVLLQ GHNIHTFDLK LVWVEPGQDR CTFHLLTPEE GFSFCSKDPQ bmy_05630T0/1-1022 LFDDALVLLQ GHSVYTFDLK LVWVEPGQDG CMFHLLTPEE EFSFCSKDPQ BACU002447/1-960 LFDDALVLLQ GHSVYTFDLK LVWVEPGQDG CMFHLLTPEE EFSFCSKDPQ 401 450 ENSP00000313670/1-953 GQAVWQWKVT WAVHQALHGK KDFPVLGAGL EPSQPPDCRC AEYTFQAEGR ENSTTRP00000016397/1-949 GRVAWQRKVT QAVCQTLRGK KDFPVLGAGL EPSEPPTCRC GAYTFRAEGR ENSBTAP00000023681/1-953 GLVVWQWKVT QAVCQALRGK KDFPVLGAGL EPSEPPTCRC GAYTFHAEGR bmy_05630T0/1-1022 GRVAWQWKVT QAVCQTLRGK KDFPVLGAGL EPSEPPTCRC GAYTFCAEGR BACU002447/1-960 GRVAWQWKVT QAVCQTLRGK RDFQVLGAGL EPSEPPTCRC GAYTFRAEGR 451 500 ENSP00000313670/1-953 LCQATYEGEW CRGRPHGKGT LKWPDGRNHV GNFCQGLEHG FGIRLLPQAS ENSTTRP00000016397/1-949 FSQATYEGEW YGGRPHGXXX XXXPDGR-HV GDFCQGLEHG FGIRLVPQAS ENSBTAP00000023681/1-953 FCQATYEGEW YWGRPHGKGT LKWPDGRNHV GDFCQGLEHG FGIRLVPQAS bmy_05630T0/1-1022 FSQATYEGEW YWGRPHGN-- ---------- ---------- FGIRLVPQAS BACU002447/1-960 FSQATYEGEW YWGRPHGKGT LKWPDGRNHV GDFCQGLEHG FGIRLVPQAS 501 550 ENSP00000313670/1-953 EDKFDCYKCH WREGSMCGYG ICEYSTDEVY KGYFQEGLRH GFGVLESGPQ ENSTTRP00000016397/1-949 EDKFDCYKCH WREGSMCGYG ICEYSTSEVY KGYFQEGLRH GFGVLESTPQ ENSBTAP00000023681/1-953 EDKFDCYKCH WWEGSMCGYG ICEYSTSEVY KGYFQEGLRH GFGVLESAPQ bmy_05630T0/1-1022 EDKFDCYKCH WREGNMCGYG ICEYSTSEVY KGYFQEGLRH GFGVLESTPQ BACU002447/1-960 EDKFDCYKCH WREGSMCGYG ICEYSTSEVY KGYFQEGLRH GFGVLESTPQ 551 600 ENSP00000313670/1-953 APQPFRYTGH WERGQRSGYG IEEDGDRGER YIGMWQAGQR HGPGVMVTQA ENSTTRP00000016397/1-949 TPQPCRYTGH WERGQRSGYG VQDDGDRGER YIGMWQADQR HGPGVVVTQA ENSBTAP00000023681/1-953 APRPLRYTGH WERGQRSGYG VEEDSDRGER YIGMWQADQR HGPGVMVTQA bmy_05630T0/1-1022 TPQPCRYTGH WERGQRSGYG IEEDGDRGER YIGMWQADQR HGPGVMVTQA BACU002447/1-960 TPQPCRYTGH WERGQRSGYG IEEDGDRGER YIGMWQADQR HGPGVMVTQA 601 650 ENSP00000313670/1-953 GVCYQGTFQA DKTVGPGILL SEDDSLYEGT FTRDLTLMGK GKVTFPNGFT ENSTTRP00000016397/1-949 GVCYQGTFQA DKMVGPGILL SEDDSLYEGT FARDLTFVGK GKVTFPNGFT ENSBTAP00000023681/1-953 GVCYQGTFQA DKMVGPGILL SDDDSLYEGT FTRDLTLVGK GKVTFPNGFT bmy_05630T0/1-1022 GACYQGTFQA DKMVGPGILL SEDDSLYEGT FTRDLSLVGK GKVTFPNGFT BACU002447/1-960 GVCCQRTFQA DKMVGPGVLL SEDDSLYEGT FTRDLTPMGK GKVTFPNGFT 651 700 ENSP00000313670/1-953 LEGSFGSGAG RGLHTQGVLD TAALPPDPSS TCKRQLGVGA FPVESRWQGV ENSTTRP00000016397/1-949 LEGSFGSGAG RGLHTQGVLD TAALPPDPGS TRKRQLGLGV FPVESRWQGV ENSBTAP00000023681/1-953 LEGSFGSVSG RGLHTQGVLD TAALPPDPSS TCKRQLGQGV FPVESRWQGV bmy_05630T0/1-1022 LEGSFGSGAG RGLHTQGVLD TAALPPDPGS TRKRQLGLGV FPVENRWQGV BACU002447/1-960 LEGSFGSGAG RGLHTQGVLD TAALPPDPGS TRKRQLGLGV FPVENRWQGV 701 750 ENSP00000313670/1-953 YSPFRDFVCA GCPRDLQEAL LGFDVQSSRE LRRSQDYLSC ERTHPEDSVG ENSTTRP00000016397/1-949 YGPFQDFVQA GCPGDLQEAL LGFHVQSSRE LRKSQEYLCC ERTHPEDHAG ENSBTAP00000023681/1-953 YGAFRDFVRA GCPGDLREAL LGFHVQSSRE LRKSQEYLCC ERTCPEDQAG bmy_05630T0/1-1022 YGPFQDFVQA GCPGDLQEAL LGFHVQSSRE LRKSQEYLCC ERTHPEDHAG BACU002447/1-960 YGPFQDFVQA GCPGDLQEAL LGFHVQSSRE LRKSQEYLCC ERTHPEDHAG 751 800 ENSP00000313670/1-953 SMEDILEELL QHREPKALQL YLRKALSNSL HPLGKLLRTL MLTFQATYAG ENSTTRP00000016397/1-949 RMEDILEELL QHRAPEALQQ CLRKALSNSL HPLGKLLRTL MLTFQATYSG ENSBTAP00000023681/1-953 RMEDLLEELL QHREPEALQQ CLRKALSNSL HPLGKLLRTL MLTFQATYAG bmy_05630T0/1-1022 RMEDILEELL QHRAPEALQQ CLKKALNNSL HPLGKLLRTL MLTFQATYSG BACU002447/1-960 RMEDILEELL QHRAPEALQQ CLRKALNNSL HPLGKLLRTL MLTFQATYSG 801 850 ENSP00000313670/1-953 VGANKHLQEL AQEEVKQHAQ ELWAAYRGLL RVALERKGQA LEEDEDTETR ENSTTRP00000016397/1-949 IGANKHLQ-L AQ-RVKQHAQ ELWAAXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000023681/1-953 IGANKHLQGL AQEEVKQHAQ ELWAAYRGLL QVALQRKGQA PEEDEDAETR bmy_05630T0/1-1022 IGANKHLQGL AQEEVKQHAQ ELWAAYRGLL QVALQCKGQA PEEDEDAETR BACU002447/1-960 IGANKHLQGL AQEEVKQHTQ ELWAAYRGLL QVALQCKGQA PEEDEDAETR 851 900 ENSP00000313670/1-953 DLQVHGLVLP LMLPSFYSEL FTLYLLLHER EDSFYSQGIA NLSLFPDTQL ENSTTRP00000016397/1-949 DLQVHRLMLP LVLPSFYSEL FTLYLLLHER EDSLYSQGIA NLSLFPDTKL ENSBTAP00000023681/1-953 DLRVHSLVLP LVLPSFYSEL FTLYLLLHER EDSLYSQGIT HLSLFPDARL bmy_05630T0/1-1022 ELHVHRLVLP LVLPSFYSEL FTLYLLLHER EDSLYSQGIA NLSLFPDTKL BACU002447/1-960 ELHVHRLVLP LVLPSFYSEL FTLYLLLHER EDSLYSQGIA NLSLFPDTKL 901 950 ENSP00000313670/1-953 LEFLDVQKHL WPLKDLTLTS NQRYSLVRDK CFLSATECLQ KIMTTVDPRE ENSTTRP00000016397/1-949 LEFLDVQXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXTTVDPRE ENSBTAP00000023681/1-953 LEFLDVQKHL WPLKDLTLTT NQRYSLVRDK CFLSATECLQ KMITTVDPRE bmy_05630T0/1-1022 LEFLDVQKHL WPLKDLTLTT NQRYSLVRDK CFLSATECLQ KMITTVDPRE BACU002447/1-960 LEFLDVQKHL WPLKDLTLTT NQRYSLVRDK CFLSATECLQ KMITTVDPRE 951 1000 ENSP00000313670/1-953 KLEVLERTYG EIEGTVSRVL GREYKLPMDD LLPLLIYVVS RARIQHLGAE ENSTTRP00000016397/1-949 KLEVLERTYG EIEATVSRML GQEHNLPMDD LLPLLIYVVS RAQIQHLGAE ENSBTAP00000023681/1-953 KLEVLERTYG EIEATVSRVL GREHKLPMDD LLPLLIYVVS RAQIQHLGAE bmy_05630T0/1-1022 KLEVLERTYG EIEATVSXVL GQEHKLPMDD LLPLLIYVVS RAQIQHLGAE BACU002447/1-960 KLEVLERTYG EIEATVSRVL GQEHKLPMDD LLPLLIYVVS RAQIQHLGAE 1001 1050 ENSP00000313670/1-953 IHLIRDMMDP NHTGGLYDFL LTALESCYEH IQKEDMRLHR LPGHWHSREL ENSTTRP00000016397/1-949 IHLIRDMMAP IHTGGLYDFL LTALESCYEH IQKEDMRLHR LPSR-NSREP ENSBTAP00000023681/1-953 IHLIRDMMDP LHTGGLYDFL LTALESCYEH IQKEDMRLHR LPSRWSSREP bmy_05630T0/1-1022 IHLIRDMMAP IHTGGLYDFL LTALESCYEH IQKEDMRLHR LPSR------ BACU002447/1-960 IHLIRDMMAP IHTGGLYDFL LTALESCYEH IQKEDMRLHR LPSR------ 1051 1100 ENSP00000313670/1-953 W ENSTTRP00000016397/1-949 W ENSBTAP00000023681/1-953 W bmy_05630T0/1-1022 - BACU002447/1-960 -