KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:21:23 2014 Check: 00 .. Name: bmy_19436T0/1-281 Len: 413 Check: 7855 Weight: 1.00 Name: ENSTTRP00000004137/1-367 Len: 413 Check: 6791 Weight: 1.00 Name: BACU018889/1-359 Len: 413 Check: 2218 Weight: 1.00 Name: ENSP00000312122/1-322 Len: 413 Check: 7086 Weight: 1.00 Name: ENSBTAP00000023702/1-322 Len: 413 Check: 9351 Weight: 1.00 // 1 50 bmy_19436T0/1-281 ---------- -------MPA SSRSLRSEQQ LLLLFLVPG- -DTDELCGPI ENSTTRP00000004137/1-367 VREPILTHVH FELLCSHPLL VSTFLKSQVR LYTCRACAGK DDMGEMVSVI BACU018889/1-359 -------HVP FELLCSHPLP VSTFLKSQVR LCTCRACAG- DEMGEMVSVI ENSP00000312122/1-322 ---------- ---------- ---------- ---------- -----MVSVI ENSBTAP00000023702/1-322 ---------- ---------- ---------- ---------- -----MVSVI 51 100 bmy_19436T0/1-281 NT-NGNETNL LRPDGLSLYF TGLRKVLFYQ KSEKRSAALI NGELPPKAPI ENSTTRP00000004137/1-367 NTVDTSHEDM I--------- ---------- ---------- ---------- BACU018889/1-359 NTVDTSHEDM I--------- ---------- ---------- ---------- ENSP00000312122/1-322 NTVDTSHEDM I--------- ---------- ---------- ---------- ENSBTAP00000023702/1-322 NTVDTSHEDM I--------- ---------- ---------- ---------- 101 150 bmy_19436T0/1-281 RTELQKQHDA QVDYCGTRPA TRSADRSVKI CDVLNGGQTL IADLRGHEGP ENSTTRP00000004137/1-367 -------XXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXHEGP BACU018889/1-359 -------VSI PLALPHMLWT WAFLGWQSTV GSFGPFEQPL TLSPCSHEGP ENSP00000312122/1-322 -------HDA QMDYYGTRLA TCSSDRSVKI FDVRNGGQIL IADLRGHEGP ENSBTAP00000023702/1-322 -------HDA QMDYYGTRLA TCSSDRSVKI FDVRNGGQIL VADLRGHEGP 151 200 bmy_19436T0/1-281 VWPVAWAHPT YGNVPASCSY DRKVIIWKEE NGTWEKTHEH T-----VNSV ENSTTRP00000004137/1-367 VWQVAWAHPM YGNVLASCSY DRKVIIWKEE NGTWEKTHEH TGHDSSVNSV BACU018889/1-359 VWQVAWAHPM YGNVLASCSY DRKVIIWKEE NGTWEKTHEH TGHDSSVNSV ENSP00000312122/1-322 VWQVAWAHPM YGNILASCSY DRKVIIWREE NGTWEKSHEH AGHDSSVNSV ENSBTAP00000023702/1-322 VWQVAWAHPM YGNILASCSY DRKVIIWKEE NGTWEKTHEH TGHDSSVNSV 201 250 bmy_19436T0/1-281 CWAPRDYGLI LACGSWDGAI SLLTYTRLGQ WEVKKTNHAH TVGCNAVSWA ENSTTRP00000004137/1-367 CWAPHDYGLI LACGSSDGAI SLLTYTGLGQ WEVKKINNAH TIGCNAVSWA BACU018889/1-359 CWAPHDYGLI LACGSSDGAI SLLTYTGLGQ WEVKKINNAH TIGCNAVSWA ENSP00000312122/1-322 CWAPHDYGLI LACGSSDGAI SLLTYTGEGQ WEVKKINNAH TIGCNAVSWA ENSBTAP00000023702/1-322 CWAPHDYGLI LACGSSDGAI SLLTYTGLGQ WEVKKINNAH TIGCNAVSWA 251 300 bmy_19436T0/1-281 PAVGPGSLTD QPPGQKPNYT KKFALAGCDN LIKLWEEXED GQREEGQKLD ENSTTRP00000004137/1-367 PAVVPGSLID QPSGQKPNYI KKFASGGCDN LIKLWKEEED GQWKEEQKLE BACU018889/1-359 PAVVPGSLID QPSGQKPNYI KKFASGGCDN LIKLWKEEED GQWKEEQKLE ENSP00000312122/1-322 PAVVPGSLID HPSGQKPNYI KRFASGGCDN LIKLWKEEED GQWKEEQKLE ENSBTAP00000023702/1-322 PAVVPGSLID QPSGQKPNYI KKFASGGCDN LIKLWKEEED GQWKEEQKLE 301 350 bmy_19436T0/1-281 AHSEWV---- ---------- ---------- ---------- ---------- ENSTTRP00000004137/1-367 AHSDWVRDVA WAPSIGLPTS TIASCSQDGR VFIWTCDDAS GNAWSPKLLH BACU018889/1-359 AHSDWVRDVA WAPSIGLPTS TIASCSQDGR VFIWTCDDAS GNAWSPKLLH ENSP00000312122/1-322 AHSDWVRDVA WAPSIGLPTS TIASCSQDGR VFIWTCDDAS SNTWSPKLLH ENSBTAP00000023702/1-322 AHSDWVRDVA WAPSIGLPTS TIASCSQDGR VFVWTCDDAS GNTWSPKLLH 351 400 bmy_19436T0/1-281 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004137/1-367 KFNDVVWHVS WSITANILAV SGGDNKVTLW KESVDGQWVC ISDVNKGQGS BACU018889/1-359 KFNDVVWHVS WSITANILAV SGGDNKVTLW KESVDGQWVC ISDVNKGQGS ENSP00000312122/1-322 KFNDVVWHVS WSITANILAV SGGDNKVTLW KESVDGQWVC ISDVNKGQGS ENSBTAP00000023702/1-322 KFNDVVWHVS WSITANILAV SGGDNKVTLW KESVDGQWVC ISDVNKGQGP 401 450 bmy_19436T0/1-281 ---------- --- ENSTTRP00000004137/1-367 VSTSVTEGQQ NEQ BACU018889/1-359 VSTSVTEGQQ NEQ ENSP00000312122/1-322 VSASVTEGQQ NEQ ENSBTAP00000023702/1-322 VSTSVTEGQQ NDQ