KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 17:21:23 2014 Check: 00 ..
Name: bmy_19436T0/1-281 Len: 413 Check: 7855 Weight: 1.00
Name: ENSTTRP00000004137/1-367 Len: 413 Check: 6791 Weight: 1.00
Name: BACU018889/1-359 Len: 413 Check: 2218 Weight: 1.00
Name: ENSP00000312122/1-322 Len: 413 Check: 7086 Weight: 1.00
Name: ENSBTAP00000023702/1-322 Len: 413 Check: 9351 Weight: 1.00
//
1 50
bmy_19436T0/1-281 ---------- -------MPA SSRSLRSEQQ LLLLFLVPG- -DTDELCGPI
ENSTTRP00000004137/1-367 VREPILTHVH FELLCSHPLL VSTFLKSQVR LYTCRACAGK DDMGEMVSVI
BACU018889/1-359 -------HVP FELLCSHPLP VSTFLKSQVR LCTCRACAG- DEMGEMVSVI
ENSP00000312122/1-322 ---------- ---------- ---------- ---------- -----MVSVI
ENSBTAP00000023702/1-322 ---------- ---------- ---------- ---------- -----MVSVI
51 100
bmy_19436T0/1-281 NT-NGNETNL LRPDGLSLYF TGLRKVLFYQ KSEKRSAALI NGELPPKAPI
ENSTTRP00000004137/1-367 NTVDTSHEDM I--------- ---------- ---------- ----------
BACU018889/1-359 NTVDTSHEDM I--------- ---------- ---------- ----------
ENSP00000312122/1-322 NTVDTSHEDM I--------- ---------- ---------- ----------
ENSBTAP00000023702/1-322 NTVDTSHEDM I--------- ---------- ---------- ----------
101 150
bmy_19436T0/1-281 RTELQKQHDA QVDYCGTRPA TRSADRSVKI CDVLNGGQTL IADLRGHEGP
ENSTTRP00000004137/1-367 -------XXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXHEGP
BACU018889/1-359 -------VSI PLALPHMLWT WAFLGWQSTV GSFGPFEQPL TLSPCSHEGP
ENSP00000312122/1-322 -------HDA QMDYYGTRLA TCSSDRSVKI FDVRNGGQIL IADLRGHEGP
ENSBTAP00000023702/1-322 -------HDA QMDYYGTRLA TCSSDRSVKI FDVRNGGQIL VADLRGHEGP
151 200
bmy_19436T0/1-281 VWPVAWAHPT YGNVPASCSY DRKVIIWKEE NGTWEKTHEH T-----VNSV
ENSTTRP00000004137/1-367 VWQVAWAHPM YGNVLASCSY DRKVIIWKEE NGTWEKTHEH TGHDSSVNSV
BACU018889/1-359 VWQVAWAHPM YGNVLASCSY DRKVIIWKEE NGTWEKTHEH TGHDSSVNSV
ENSP00000312122/1-322 VWQVAWAHPM YGNILASCSY DRKVIIWREE NGTWEKSHEH AGHDSSVNSV
ENSBTAP00000023702/1-322 VWQVAWAHPM YGNILASCSY DRKVIIWKEE NGTWEKTHEH TGHDSSVNSV
201 250
bmy_19436T0/1-281 CWAPRDYGLI LACGSWDGAI SLLTYTRLGQ WEVKKTNHAH TVGCNAVSWA
ENSTTRP00000004137/1-367 CWAPHDYGLI LACGSSDGAI SLLTYTGLGQ WEVKKINNAH TIGCNAVSWA
BACU018889/1-359 CWAPHDYGLI LACGSSDGAI SLLTYTGLGQ WEVKKINNAH TIGCNAVSWA
ENSP00000312122/1-322 CWAPHDYGLI LACGSSDGAI SLLTYTGEGQ WEVKKINNAH TIGCNAVSWA
ENSBTAP00000023702/1-322 CWAPHDYGLI LACGSSDGAI SLLTYTGLGQ WEVKKINNAH TIGCNAVSWA
251 300
bmy_19436T0/1-281 PAVGPGSLTD QPPGQKPNYT KKFALAGCDN LIKLWEEXED GQREEGQKLD
ENSTTRP00000004137/1-367 PAVVPGSLID QPSGQKPNYI KKFASGGCDN LIKLWKEEED GQWKEEQKLE
BACU018889/1-359 PAVVPGSLID QPSGQKPNYI KKFASGGCDN LIKLWKEEED GQWKEEQKLE
ENSP00000312122/1-322 PAVVPGSLID HPSGQKPNYI KRFASGGCDN LIKLWKEEED GQWKEEQKLE
ENSBTAP00000023702/1-322 PAVVPGSLID QPSGQKPNYI KKFASGGCDN LIKLWKEEED GQWKEEQKLE
301 350
bmy_19436T0/1-281 AHSEWV---- ---------- ---------- ---------- ----------
ENSTTRP00000004137/1-367 AHSDWVRDVA WAPSIGLPTS TIASCSQDGR VFIWTCDDAS GNAWSPKLLH
BACU018889/1-359 AHSDWVRDVA WAPSIGLPTS TIASCSQDGR VFIWTCDDAS GNAWSPKLLH
ENSP00000312122/1-322 AHSDWVRDVA WAPSIGLPTS TIASCSQDGR VFIWTCDDAS SNTWSPKLLH
ENSBTAP00000023702/1-322 AHSDWVRDVA WAPSIGLPTS TIASCSQDGR VFVWTCDDAS GNTWSPKLLH
351 400
bmy_19436T0/1-281 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000004137/1-367 KFNDVVWHVS WSITANILAV SGGDNKVTLW KESVDGQWVC ISDVNKGQGS
BACU018889/1-359 KFNDVVWHVS WSITANILAV SGGDNKVTLW KESVDGQWVC ISDVNKGQGS
ENSP00000312122/1-322 KFNDVVWHVS WSITANILAV SGGDNKVTLW KESVDGQWVC ISDVNKGQGS
ENSBTAP00000023702/1-322 KFNDVVWHVS WSITANILAV SGGDNKVTLW KESVDGQWVC ISDVNKGQGP
401 450
bmy_19436T0/1-281 ---------- ---
ENSTTRP00000004137/1-367 VSTSVTEGQQ NEQ
BACU018889/1-359 VSTSVTEGQQ NEQ
ENSP00000312122/1-322 VSASVTEGQQ NEQ
ENSBTAP00000023702/1-322 VSTSVTEGQQ NDQ