KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:21:26 2014 Check: 00 .. Name: ENSP00000418259/1-536 Len: 636 Check: 2152 Weight: 1.00 Name: ENSBTAP00000023710/1-515 Len: 636 Check: 6705 Weight: 1.00 Name: ENSTTRP00000008104/1-490 Len: 636 Check: 6302 Weight: 1.00 Name: bmy_18653T0/1-500 Len: 636 Check: 9921 Weight: 1.00 Name: BACU007857/1-595 Len: 636 Check: 6352 Weight: 1.00 // 1 50 ENSP00000418259/1-536 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000023710/1-515 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008104/1-490 ---------- ---------- ---------- ---------- ---------- bmy_18653T0/1-500 ------MVAF RKQARRAG-- ----PVPGPG GAGTGSWAAX KRALG----- BACU007857/1-595 MFSAVEEENL DSRTKKEDSP LEQIPLPPEA TSNPGAFSKS LHLLSHWEVD 51 100 ENSP00000418259/1-536 ---------- ---------- -------MFE QLKPIEPVQK TLPWVGEVAA ENSBTAP00000023710/1-515 ---------- ---------- ---MEEKVSD QPKPVEPVQK LLPQVDEEG- ENSTTRP00000008104/1-490 ---------- ---------- -------VFD LLKPTEP--- ---------- bmy_18653T0/1-500 ---------- -----WSGLA AGPSE----- ILRPKVP--- ---------- BACU007857/1-595 SPRKEPSQPW GPGQEWTKLE RDIREEKVFD LLKPVEPVQK LLPQVDEEA- 101 150 ENSP00000418259/1-536 TLQEAMKRDC WREARVKKKP VTFEDVAVNF TQEEWDCLDA SQRVLYQDVM ENSBTAP00000023710/1-515 -LPKAWKGEC WWKEWV-KKP VTFEDVAVNF TQEEWKCLDV SQRVLYQDVI ENSTTRP00000008104/1-490 -------GEC WWKAWV-KKP VTSEDVAVNF NQEEWECLDA SQRVLYQDVM bmy_18653T0/1-500 ---------- ---------- ---------- ---------- ---------- BACU007857/1-595 -LQEAVKGEC WWKAWV-KKP VTSEDVAVNF TQEEWECLDA SQRVLYQDVM 151 200 ENSP00000418259/1-536 SETFKNLTSV ARIFLHKPEL ITKLEQEEEQ WREFVHLPNT EGL-SEGKKK ENSBTAP00000023710/1-515 SETVRNLMSV DGIFLSNLDL IAKLEQEEKQ WEADLCSPNG EGFHSGGKKE ENSTTRP00000008104/1-490 SETFRNLMSV VRIFLSNPDL IAKFEQEEKQ WRAGLRPPNG EGLHSGGKRE bmy_18653T0/1-500 ------VLGS GGIFLSNPDL IAKFEQEEKQ WRADLCPPNG EGLHSGGTRE BACU007857/1-595 SETFRNLMSV --------DL IAKFEQEEKQ WRADLRPPNG EGLHSGGMRE 201 250 ENSP00000418259/1-536 ELREQHPSLR DEGTSDD-KV FLACRGAGQC PLSAPAGTMD RTRVLQASQA ENSBTAP00000023710/1-515 ESQEQSQSLG DEGTVDDKKA SLAHRGLG-- PTSPPAGSPE KTPTLPESWA ENSTTRP00000008104/1-490 ELQEQSQSLG DEGNSDDKKV SLACRRAG-- PSSAPTGSLD RTAVFPASWA bmy_18653T0/1-500 ELQEQSQSLG DEGNSDDKKV SLARRRAG-- PSSAPAGSLD RTPVFPASWA BACU007857/1-595 ELQEQSQSLG DEGNSDDKKV SLARRRAS-- PSSAPAGSLD RTPVFPASWT 251 300 ENSP00000418259/1-536 GPPFFCYTCG KCFSRRSYLY SHQFVHNPKL TNSCSQCGKL FRSPKSLSYH ENSBTAP00000023710/1-515 RPAFTCHTCG KCFSKRSSLY NHQLVHN--- ---SAQCGKS FQNPKDLSSG ENSTTRP00000008104/1-490 GPPFTCHTCG RCFSKRSSLY NHQFVHS--- ---CGQCGKS FLNPKDLSYH bmy_18653T0/1-500 GPPFTCHTCG RCFSKRSSLY NHQFVHS--- ---CGQCGKS FLNPKDLSYH BACU007857/1-595 GPPFTCHTCG RCFSKRSSLY NHQFVHS--- ---CGQCGKS FLNPKDLSYH 301 350 ENSP00000418259/1-536 RRMHLGERPF CCTLCDKTYC DASGLSRHRR VHLGYRPHSC SVCGKSFRDQ ENSBTAP00000023710/1-515 RRKQPRERPF RCSLCGKTYC DASGLSRHRR VHLGYRPHAC PFCGKCFRDQ ENSTTRP00000008104/1-490 RRKHLGERPF CCSLCDKTYC DASGLSRHRR VHLGYRPHSC PFCGKCFRDQ bmy_18653T0/1-500 RRKHLGERPF CCSLCDKTYC DASGLSRHRR VHLGYRPHSC PFCGKCFRDQ BACU007857/1-595 RRKHLGERPF CCSLCDKTYC DASGLSRHRR VHLGYRPHSC PFCGKCFRDQ 351 400 ENSP00000418259/1-536 SELKRHQKIH QNQEPVDGNQ ECTLRIPGTQ AEFQTPIARS QRSIQGLLDV ENSBTAP00000023710/1-515 SELKRHQKTH QGQKLGAGNQ KHIVRTPDTR AGL------- ----QGLATG ENSTTRP00000008104/1-490 SELKRHQKIH QGQELGAGNQ KHILKIPDNT AGF------- ----QGLATA bmy_18653T0/1-500 SELKRHQKIH QGQELGAGNQ KHMVKIPDNT AGF------- ----QGLATA BACU007857/1-595 SELKRHQKIH QGQELGAGNQ KHIVKIPDNT AGF------- ----QGLATA 401 450 ENSP00000418259/1-536 NHAPVARSQE PIFRTEGPMA QNQASVLKNQ ---------- ---------- ENSBTAP00000023710/1-515 NHAAVAATQG PTLKTKGPKT QPQLSIDRNQ ---------- ---------- ENSTTRP00000008104/1-490 NNAPVAGTQ- PSFKTAGPEA QTQPSIXXXX ---------- ---------- bmy_18653T0/1-500 NNAPVAGTQG PSFKTTGPEA QTQPSIDRSQ APATKNQVIT GKAQRPVVTT BACU007857/1-595 NNAPVAGTQG PSFKTTGPEA QTQPPIDRSQ APATKNQVIT GKPQLPVVTT 451 500 ENSP00000418259/1-536 -APVTRTQAP ITGTLCQDAR SNSHPVKPSR LNVFCCPHCS LTFSKKSYLS ENSBTAP00000023710/1-515 -EPVTRTLAA NMRATRLNTK SNSHPEKPSR LKVFSCPHCP LTFSRKTRLS ENSTTRP00000008104/1-490 -XXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXSCPHCP LTFSKKSCLS bmy_18653T0/1-500 PEPVTRSQAA NKRAACLDTK SSSHPGKPSR LKVFSCPHCP LTFSKKICLS BACU007857/1-595 PEPVTRTQAA NKRATRLDTK SSSHPGKPSR LKVFSCPHCP LTFSKKICLS 501 550 ENSP00000418259/1-536 RHQKAHLTEP PNYCFHCSKS FSSFSRLVRH QQTHWKQKSY LCPICDLSFG ENSBTAP00000023710/1-515 SHQKVHFTEQ SNRCFHCGKS FTLFSGLIRH QQTHWKQRVY CCPICDVCFG ENSTTRP00000008104/1-490 SHQKAHFTEQ SNCCFHCGKS FTLFSGLVRH QQTHWKQKLY CCPICDVCFG bmy_18653T0/1-500 SHQKAHFTEQ SNRCFHCGKS FTLFSGLVRH QQTHWKQKLY CCPICDVCFG BACU007857/1-595 SHQKAHFTEQ SNRCFHCGKS FTLFSGLVRH QQTHWKQKLY CCPICDVCFG 551 600 ENSP00000418259/1-536 EKEGLMDHWR GYKGKDLCQS SHHKCRVILG QWLGFSHDVP TMAGEEWKHG ENSBTAP00000023710/1-515 EKEDLLGHWG GYRSKGLFLG SPHKCWAILG QWLGFFPNAS AVAGKE---- ENSTTRP00000008104/1-490 EKEDLLGHWG GYRGKGLCLG SPHKCWAILG QSLGFFPDAP TVAGED---- bmy_18653T0/1-500 EKEDLLGHWG GYRGKGLCLG SPHKCWAILG QWLGFFPDAS TVAGEE---- BACU007857/1-595 EKEDLLGHWG GYRGKGLCLG SPHKCWAILG QWLGFFPDAS TVAGEE---- 601 650 ENSP00000418259/1-536 GDQSPPRIHT PRRRGLREKA CKGDKTKEAV SILKHK ENSBTAP00000023710/1-515 MDLSPGSRPS GKGRKGEEKA -RRRKKAKAM KVLEGK ENSTTRP00000008104/1-490 GSFS--WIHT LRRRKGGEKA -RGKKADKAV KVLECK bmy_18653T0/1-500 MDLSPGSIPS GEGRKGGEKA AEERKQVRQ- ------ BACU007857/1-595 MDLSPGSIPS GEGRKGGEKA AEERKQIRQ- ------