KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:21:29 2014 Check: 00 .. Name: bmy_16512T0/1-375 Len: 599 Check: 7544 Weight: 1.00 Name: ENSTTRP00000008998/1-455 Len: 599 Check: 2361 Weight: 1.00 Name: ENSBTAP00000023729/1-474 Len: 599 Check: 1896 Weight: 1.00 Name: BACU016171/1-457 Len: 599 Check: 6013 Weight: 1.00 Name: ENSP00000419692/1-462 Len: 599 Check: 1063 Weight: 1.00 // 1 50 bmy_16512T0/1-375 MASPHPGMGR HRTERMGSSP GLDSGVALAL LLVRLTTGSS PGQSSGITHQ ENSTTRP00000008998/1-455 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000023729/1-474 ---------- ---------- ---------- ---------- ---------- BACU016171/1-457 ---------- ---------- ---------- ---------- ---------- ENSP00000419692/1-462 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_16512T0/1-375 SGLSHMNWFA QTAFQLPGVW KEAPTRWRAE LSGSKFLRDL VEVLGEDSHS ENSTTRP00000008998/1-455 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000023729/1-474 ---------- ---------- ---------- ---------- -------SPV BACU016171/1-457 ---------- ---------- ---------- ---------- ---------- ENSP00000419692/1-462 ---------- ---------- ---------- ---------- ---------- 101 150 bmy_16512T0/1-375 WSPGQGRASL ISALPSRQRT RVYVHVTARL HAYTHNVRTD FSTQVNSSSL ENSTTRP00000008998/1-455 ---------- ---------- ---------- ---------- FSTQVNSSSL ENSBTAP00000023729/1-474 WAPD------ ---------- ---------- QPPVASCLAD FSTQVNSSSL BACU016171/1-457 ---------- ---------- ---------- ---------- FSTQVNASSL ENSP00000419692/1-462 ---------- ---------- ---------- MDTKHFLPLD FSTQVN-SSL 151 200 bmy_16512T0/1-375 NSPTGRGSMA APSLHPSLGP GIGSSLGSPG QLHSPISTLS SPINGMGPPF ENSTTRP00000008998/1-455 NSPTGRGSMA APSLHPSLGP GIGSSLGSPG QLHSPISTLS SPINGMGPPF ENSBTAP00000023729/1-474 SSPTARSSMA APSLHPSLGP SIGSSLGSPG QLHSPISTLS SPINGMGPPF BACU016171/1-457 NSPTGRGPMA APSLHPSLGP GIGSSLSSPG QLHSPISTLS SPINGMGPPF ENSP00000419692/1-462 TSPTGRGSMA APSLHPSLGP GIG----SPG QLHSPISTLS SPINGMGPPF 201 250 bmy_16512T0/1-375 SVISSPMGPH SMSVPTTPTL GFGTGSPQLN SPMNPVSSSE DIKPPLGLNG ENSTTRP00000008998/1-455 SVISSPMGPH SMSVPTTPTL GFGTGSPQLN SPMNPVSSSE DIKPPLGLNG ENSBTAP00000023729/1-474 SVISSPMGPH SMSVPTTPTL GFGTGSPQLS SPMNPVSSSE DIKPPLGLNG BACU016171/1-457 SVISSPMGPH SMSVPTTPTL GFGTGSPQLN SPMNPVSSSE DIKPPLGLNG ENSP00000419692/1-462 SVISSPMGPH SMSVPTTPTL GFSTGSPQLS SPMNPVSSSE DIKPPLGLNG 251 300 bmy_16512T0/1-375 VLKVPAHPSG NMASFTKHIC AICGDRSSGK HYGVYSCEGC KGFFKRTVRK ENSTTRP00000008998/1-455 VLKVPAHPSG NMASFTKHIC AICGDRSSXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000023729/1-474 VLKVPAHPSG NMASFTKHIC AICGDRSSGK HYGVYSCEGC KGFFKRTVRK BACU016171/1-457 VLKVPAHPSG NMASFTKHIC AICGDRSSGK HYGVYSCEGC KGFFKRTVRK ENSP00000419692/1-462 VLKVPAHPSG NMASFTKHIC AICGDRSSGK HYGVYSCEGC KGFFKRTVRK 301 350 bmy_16512T0/1-375 DLTYTCRDNK DCLIDKRQRN RCQYCRYQKC LAMGMKREGP CLSQHLRMGS ENSTTRP00000008998/1-455 XXXXXXXXXX XXXXXXXXXN RCQY-DYQK- LVMGQKRE-- AVQEERQRGK ENSBTAP00000023729/1-474 DLTYTCRDNK DCLIDKRQRN RCQYCRYQKC LAMGMKRE-- AVQEERQRGK BACU016171/1-457 DLTYTCRDNK DCLIDKRQRN RCQYCRYQKC LAMGMKRE-- AVQEERQRGK ENSP00000419692/1-462 DLTYTCRDNK DCLIDKRQRN RCQYCRYQKC LAMGMKRE-- AVQEERQRGK 351 400 bmy_16512T0/1-375 PEGGS----- ---------- ---------- ---------- ---------- ENSTTRP00000008998/1-455 DRAENEVEST SSANEDMPVE KILEAELAVE PKTETYVEAN VGLNPSSPND ENSBTAP00000023729/1-474 DRGESEVESS SSANEDMPVE KILEAELAVE PKTETYVEAN VGLNPSSPND BACU016171/1-457 DRAENEVEST SSANEDMPVE KILEAELAVE PKTETYVEAN VGPNPSSPND ENSP00000419692/1-462 DRNENEVEST SSANEDMPVE RILEAELAVE PKTETYVEAN MGLNPSSPND 401 450 bmy_16512T0/1-375 ---------- ---------- ---------- ------LSQE SWN------- ENSTTRP00000008998/1-455 PVTNICQAAD KQLFTLVEWA KRIPHFSELP LDDQVILLRA GWNELLIASF ENSBTAP00000023729/1-474 PVTNICQAAD KQLFTLVEWA KRIPHFSELP LDDQVILLRA GWNELLIASF BACU016171/1-457 PVTNICQAAD KQLFTLVEWA KRIPHFSELP LDDQVILLRA GWNELLIASF ENSP00000419692/1-462 PVTNICQAAD KQLFTLVEWA KRIPHFSELP LDDQVILLRA GWNELLIASF 451 500 bmy_16512T0/1-375 ----TAEADX VLTAQGY--- ---------- ---------- ---------- ENSTTRP00000008998/1-455 SHRSIAVKDG ILLATGLHVH RNSAHSAGVG AIFDRVLTEL VSKMRDMQMD ENSBTAP00000023729/1-474 SHRSIAVKDG ILLATGLHVH RNSAHSAGVG AIFDRVLTEL VSKMRDMQMD BACU016171/1-457 SHRSIAVKDG ILLATGLHVH RNSAHSAGVG AIFDRVLTEL VSKMRDMQMD ENSP00000419692/1-462 SHRSIAVKDG ILLATGLHVH RNSAHSAGVG AIFDRVLTEL VSKMRDMQMD 501 550 bmy_16512T0/1-375 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008998/1-455 KTELGCLRAI VLFNPDSKGL SNPAEVETLR EKVYASLEAY CKHKYPEQPG ENSBTAP00000023729/1-474 KTELGCLRAI VLFNPDSKGL SNPAEVEALR EKVYASLEAY CKHKYPEQPG BACU016171/1-457 KAELGCLRAI VLFNPDSKGL SNPAEVEALR EKVYASLEAY CKHKYPEQPG ENSP00000419692/1-462 KTELGCLRAI VLFNPDSKGL SNPAEVEALR EKVYASLEAY CKHKYPEQPG 551 600 bmy_16512T0/1-375 ---------- ---------- ---------- ---------- --------- ENSTTRP00000008998/1-455 RFAKLLLRLP ALRSIGLKCL EHLFFFKLIG DTPIDTFLME MLEAPHQMT ENSBTAP00000023729/1-474 RFAKLLLRLP ALRSIGLKCL EHLFFFKLIG DTPIDTFLME MLEAPHQMT BACU016171/1-457 RFAKLLLRLP ALRSIGLKCL EHLFFFKLIG DTPIDTFLME MLEAPHQMT ENSP00000419692/1-462 RFAKLLLRLP ALRSIGLKCL EHLFFFKLIG DTPIDTFLME MLEAPHQMT