KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:21:30 2014 Check: 00 .. Name: BACU010965/1-446 Len: 450 Check: 8201 Weight: 1.00 Name: ENSP00000322730/1-267 Len: 450 Check: 4837 Weight: 1.00 Name: ENSBTAP00000023734/1-271 Len: 450 Check: 4688 Weight: 1.00 Name: bmy_04896T0/1-270 Len: 450 Check: 2684 Weight: 1.00 Name: ENSTTRP00000013522/1-271 Len: 450 Check: 4757 Weight: 1.00 // 1 50 BACU010965/1-446 MVKISFQPAV AGIKGDKADK AD-KASASAP APSPAAEILL TPARPLEGAG ENSP00000322730/1-267 MVKISFQPAV AGIKGDKADK AS----ASAP APASATEILL TPAR------ ENSBTAP00000023734/1-271 MVKISFQPAV AGIKGDKADK ASASASASAP APTPAAEILL TPAR------ bmy_04896T0/1-270 MVKISFQPAV AGIKGDKADK AD-KASASAP APSPAAEILL TPAR------ ENSTTRP00000013522/1-271 MVKISFQPAV AGIKGDKADK ASASASASAP APAPAAEILL TPSR------ 51 100 BACU010965/1-446 LGAQGSTLTP VFSQLLLPGP GTQMRPGKLD PASKSCRIRA GGRTSQAVEG ENSP00000322730/1-267 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000023734/1-271 ---------- ---------- ---------- ---------- ---------- bmy_04896T0/1-270 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013522/1-271 ---------- ---------- ---------- ---------- ---------- 101 150 BACU010965/1-446 WISNSIRRSA EFHRSRTFSG SSLLMVSGGM ADASIALAVT DIQLLAPKSS ENSP00000322730/1-267 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000023734/1-271 ---------- ---------- ---------- ---------- ---------- bmy_04896T0/1-270 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013522/1-271 ---------- ---------- ---------- ---------- ---------- 151 200 BACU010965/1-446 VLSSPSSSMK WKYQHFPCAV FNGFEPAECA SPPDLVSWEE RPPYHRYKKG ENSP00000322730/1-267 ---------- ---------- ---------- --------EE QPPQHRSKRG ENSBTAP00000023734/1-271 ---------- ---------- ---------- --------EE RPPYQRYKKG bmy_04896T0/1-270 ---------- ---------- ---------- --------EE RPPYHRYKKG ENSTTRP00000013522/1-271 ---------- ---------- ---------- --------EE RPPYHRYKKG 201 250 BACU010965/1-446 SSVGGLCYLS MGMVVLLMGL VFASVYIYRY FFLAQGVGEP QSNLWVYALE ENSP00000322730/1-267 GSVGGVCYLS MGMVVLLMGL VFASVYIYRY FFLAQ----- ------LARD ENSBTAP00000023734/1-271 GSVGGVCYLS MGMVVLLMGL VFASVYIYRY FFLAQ----- ------LARD bmy_04896T0/1-270 SSVGGLCYLS MGMVVLLMGL VFASVYIYRY FFLAQ----- ------LARD ENSTTRP00000013522/1-271 SSVGGLCYLS MGMVVLLMGL VFASVYIYRY FFLAQ----- ------LARD 251 300 BACU010965/1-446 QYDSCVMIHP ---SGTAYTK TEKGVCPSWA GPGGGPGEAG GARGPPLEED ENSP00000322730/1-267 NFFRCGVLYE DSLSSQVRTQ ME-------- ---------- ------LEED ENSBTAP00000023734/1-271 NFFHCGVLYE DSLSSQAHTR ME-------- ---------- ------LEED bmy_04896T0/1-270 NFFHCGVLYE DSLSSQVRTR ME-------- ---------- ------LEED ENSTTRP00000013522/1-271 NFFHCGVLYE DSLTSQARTR ME-------- ---------- ------LEED 301 350 BACU010965/1-446 VKIYLEENYE RINVPVPQFG GGDPADIIHD FQRGLTAYHD ISLDKCYVIE ENSP00000322730/1-267 VKIYLDENYE RINVPVPQFG GGDPADIIHD FQRGLTAYHD ISLDKCYVIE ENSBTAP00000023734/1-271 VKIYLEENYE RINVPVPQFG GGDPADIIHD FQRGLTAYHD ISLDKCYVIE bmy_04896T0/1-270 VKIYLEENYE RINVPVPQFG GGDPADIIHD FQRGLTAYHD ISLDKCYVIE ENSTTRP00000013522/1-271 VKIYLEENYE RINVPVPQFG GGDPADIIHD FQRGLTAYHD ISLDKCYVIE 351 400 BACU010965/1-446 LNTTIVLPPR NFWELLMNVK RGTYLPQTYI IQEEMVVTEH VSDKEALGSF ENSP00000322730/1-267 LNTTIVLPPR NFWELLMNVK RGTYLPQTYI IQEEMVVTEH VSDKEALGSF ENSBTAP00000023734/1-271 LNTTIVLPPR NFWELLMNVK RGTYLPQTYI IQEEMVVTEH VSDKEALGSF bmy_04896T0/1-270 LNTTIVLPPR NFWELLMNVK RGTYLPQTYI IQEEMVVTEH VSDKEALGSF ENSTTRP00000013522/1-271 LNTTIVLPPR NFWELLMNVK RGTYLPQTYI IQEEMVVTEH VSDKEALGSF 401 450 BACU010965/1-446 IYHLCNGKDT YRLRRRATRR RINKRGAKNC NAIRHFENTF VVETLICGVA ENSP00000322730/1-267 IYHLCNGKDT YRLRRRATRR RINKRGAKNC NAIRHFENTF VVETLICGVV ENSBTAP00000023734/1-271 IYHLCSGKDT YRLRRRATRR RINKREAKNC NAIRHFENTF VVETLICGVV bmy_04896T0/1-270 IYHLCSGKDT YRLRRRATRR RINKRGAKNC NAIRHFENTF VVETLICGVA ENSTTRP00000013522/1-271 IYHLCSGKDT YRLRRRATRR RINKRGAKNC NAIRHFENTF VVETLICGVA