KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 4 Type: P Thu May 15 17:21:30 2014 Check: 00 ..
Name: ENSP00000242465/1-158 Len: 158 Check: 7292 Weight: 1.00
Name: ENSBTAP00000023743/1-150 Len: 158 Check: 3175 Weight: 1.00
Name: bmy_04417T0/1-132 Len: 158 Check: 6698 Weight: 1.00
Name: ENSTTRP00000007730/1-152 Len: 158 Check: 7616 Weight: 1.00
//
1 50
ENSP00000242465/1-158 MMQKLLKCSR LVLALALILV LESSVQGYPT RRARYQWVRC NPDSNSANCL
ENSBTAP00000023743/1-150 -LQVLLQCAR LVLALAFILF -SSSVQGSPV QRAGYQCNPD SPDSNSANCI
bmy_04417T0/1-132 ---------- -----GFLVW -----AGSPV RRARYQWVRC NPESNSANCI
ENSTTRP00000007730/1-152 IMQVLLQCSR LVLALAFILI LGSSVQGSPV RKARYQWVRC NPDSNSANCI
51 100
ENSP00000242465/1-158 EEKGPMFELL PGESNKIPRL RTDLFPKTRI QDLNRIFPLS EDYSGSGFGS
ENSBTAP00000023743/1-150 EEKGTAFDIL RGESSRIPPP RTDISPLMNS KNLNEVFPLS EDI------S
bmy_04417T0/1-132 DEKGPEFDLL PGESNRILSP RTDPFSMMKS RKLNDVFPLS EDF------S
ENSTTRP00000007730/1-152 DEKGPEFDLL PGEYNRILPP RTDPFSMMKS RNLNDVFPLS EDF------S
101 150
ENSP00000242465/1-158 GSGSGSGSGS GFLTEMEQDY QLVDESDAFH DNLRSLDRNL PSDSQDLGQH
ENSBTAP00000023743/1-150 GSGSGAESGS GFLNEIEQEY QPVEENDAFY YTFRSRKRNV PSYNQDLGQD
bmy_04417T0/1-132 GSGSGSGSGN GFLXEIEQEY QPVEENDAFY YNFRSLERNL PSDNQDLGQD
ENSTTRP00000007730/1-152 GSGSGSGSGS GFLREIEQEY QPLEENDAFY YNFRSLERNL PSDNQDLGQN
151 200
ENSP00000242465/1-158 GLEEDFML
ENSBTAP00000023743/1-150 GPEEDFTI
bmy_04417T0/1-132 GPEEDFTI
ENSTTRP00000007730/1-152 GPEEDFTI