KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:21:31 2014 Check: 00 .. Name: ENSP00000257860/1-470 Len: 1375 Check: 5420 Weight: 1.00 Name: ENSBTAP00000023744/1-469 Len: 1375 Check: 2971 Weight: 1.00 Name: ENSTTRP00000004283/1-469 Len: 1375 Check: 2532 Weight: 1.00 Name: BACU007996/1-1072 Len: 1375 Check: 4196 Weight: 1.00 Name: bmy_05785T0/1-786 Len: 1375 Check: 4983 Weight: 1.00 // 1 50 ENSP00000257860/1-470 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000023744/1-469 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004283/1-469 ---------- ---------- ---------- ---------- ---------- BACU007996/1-1072 ---------- ---------- ---------- ---------- ---------- bmy_05785T0/1-786 MGLQWQLGLR AQGCSRKHLG FPSPLLTPIK PPTLTQAGPS PPHFQELVAT 51 100 ENSP00000257860/1-470 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000023744/1-469 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004283/1-469 ---------- ---------- ---------- ---------- ---------- BACU007996/1-1072 ---------- ---------- ---------- ---------- ---------- bmy_05785T0/1-786 RPGLSIPPLS PILPLPIPLA TKPDSSRRRT WQLFRERLIA QKEGGAWRGE 101 150 ENSP00000257860/1-470 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000023744/1-469 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004283/1-469 ---------- ---------- ---------- ---------- ---------- BACU007996/1-1072 ---------- ---------- ---------- ---------- ---------- bmy_05785T0/1-786 EGKGGRDVSV RALAHLRGHT KAGRLLCPAV LRGWPAREPP SSSPQPEVQP 151 200 ENSP00000257860/1-470 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000023744/1-469 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004283/1-469 ---------- ---------- ---------- ---------- ---------- BACU007996/1-1072 ---------- ---------- ---------- ---------- ---------- bmy_05785T0/1-786 GVPDLFPQMP SSCPQGQSYA DLSLLESPGV RSGSSPLAPD KLNRPQHLDS 201 250 ENSP00000257860/1-470 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000023744/1-469 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004283/1-469 ---------- ---------- ---------- ---------- ---------- BACU007996/1-1072 ---------- ---------- ---------- ---------- ---------- bmy_05785T0/1-786 CRPSKLPLST PGQPVPAFWK PFDMQRPDIS LPANSGVGEA PLIAGYLQLL 251 300 ENSP00000257860/1-470 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000023744/1-469 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004283/1-469 ---------- ---------- ---------- ---------- ---------- BACU007996/1-1072 ---------- ---------- ---------- ---------- ---------- bmy_05785T0/1-786 STGNRFLPQL GESSRQGAGN QGGRARRSLC TAGVGRPPPH IAPPSGQWEE 301 350 ENSP00000257860/1-470 ---------- ---------- ---------- --------MS HHPSGLRAGF ENSBTAP00000023744/1-469 ---------- ---------- ---------- --------MS H-PSGLRSSV ENSTTRP00000004283/1-469 ---------- ---------- ---------- --------MS H-PSGLRSGV BACU007996/1-1072 --MPPRARRA IKPPRSGLRL LPSARTSSAS GDCPSSAAMS H-PSGFRSGV bmy_05785T0/1-786 QPMPPRARRA IKPPRSGLRL LPSARTSSAS GDCPSSAAMS H-PSGLRSGV 351 400 ENSP00000257860/1-470 SSTSYRRTFG PPPSLSPGAF SYSSSSRFSS SRLLGSASPS SSVRLGSFRS ENSBTAP00000023744/1-469 SSTSYRRTFG PPPSLSPGAF SYSSSSRFSS SRLLGSASPG SSVRLGSFRG ENSTTRP00000004283/1-469 SSTYYRRTFG PPPSLSPGAL SYSSSSRFSS SRLLGSASPG SSVRLGSFRS BACU007996/1-1072 SSTYYRRAFG PPPSLSPGAF SYSSSSRFSS SRLLGSASPG SSVRLGSFRS bmy_05785T0/1-786 SSTYYRRTFG PPPSLSPGAF SYSSSSRFSS SRLLGSASPG SSVRLGSFRS 401 450 ENSP00000257860/1-470 PRAGAGALLR LPSERLDFSM AEALNQEFLA TRSNEKQELQ ELNDRFANFI ENSBTAP00000023744/1-469 PRAGTGALLR LPSERLDFSM AEALNQEFLA TRSNEKQELQ ELNDRFANFI ENSTTRP00000004283/1-469 PRAAAGALLR LPSERLDFSM AEALNQEFLA TRSNEKQELQ ELNDRFANFI BACU007996/1-1072 PRAGAGALLR LPSERLDFSM AEALNQEFLA TRSNEKQELQ ELNDRFANFI bmy_05785T0/1-786 PRAGAGALLR LPSERLDFSM AEALNQEFLA TRSNEKQELQ ELNDRFANFI 451 500 ENSP00000257860/1-470 EKVRFLEQQN AALRGELSQA RGQEPARADQ LCQQELRELR RELELLGRER ENSBTAP00000023744/1-469 EKVRFLEQQN AALRGELNQA RGQEPARADQ LCQQELRELR RELELLGRER ENSTTRP00000004283/1-469 EKVRFLEQQN AALRGELSQA RGQEPARADQ LCQQELRELR RELELLGRER BACU007996/1-1072 EKVRFLEQQN AALRGELSQA RGQEPARTDQ LCQQELRELR RELELLGRER bmy_05785T0/1-786 EKVRFLEQQN AALRGELSQA RGQEPARTDQ LCQQELRELR RELELLGRER 501 550 ENSP00000257860/1-470 DRVQVERDGL AEDLAALKQR LEEETRKRED AEHNLVLFRK DVDDATLSRL ENSBTAP00000023744/1-469 DRVQVERDGL AEDLAALKQR LEEETRKRED AEHNLVLFRK DVDDATLSRL ENSTTRP00000004283/1-469 DRVQVERDGL AEDLAALKQR LEEETRKRED AEHSLVLFRK DVDDATLSRL BACU007996/1-1072 DRVQVERDGL AEDLAALKQR LEEETRKRED AEHSLVLFRK DVDDATLSRL bmy_05785T0/1-786 DRVQVERDGL AEDLAALKQR LEEETRKRED AEHSLVLFRK DVDDATLSRL 551 600 ENSP00000257860/1-470 ELERKIESLM DEIEFLKKLH EEELRDLQVS VESQQVQQVE VEATVKPELT ENSBTAP00000023744/1-469 ELERKIESLM DEIEFLKKLH EEELRDLQLS VESQQVQHVE VEATVKPELT ENSTTRP00000004283/1-469 ELERKIESLM DEIEFLKKLH EEELRDLQMS VESQQVQQVE VEATVKPELT BACU007996/1-1072 ELERKIESLM DEIEFLKKLH EEELRDLQMS VESQQVQQVE VEATVKPELT bmy_05785T0/1-786 ELERKIESLM DEIEFLKKLH EEELRDLQMS VESQQVQQVE VEATVKPELT 601 650 ENSP00000257860/1-470 AALRDIRAQY ESIAAKNLQE AEEWYKSKYA DLSDAANRNH EALRQAKQEM ENSBTAP00000023744/1-469 AALRDIRAQY ESIAAKNLQE AEEWYKSKYA DLSDAANRNH EALRQAKQEM ENSTTRP00000004283/1-469 AALRDIRAQY ESIAAKNLQE AEEWYKSKYA DLSDAANRNH EALRQAKQEM BACU007996/1-1072 AALRDIRAQY ESIAAKNLQE AEEWYKSKYA DLSDAANRNH EALRQAKQEM bmy_05785T0/1-786 AALRDIRAQY ESIAAKNLQE AEEWYKSKYA DLSDAANRNH EALRQAKQEM 651 700 ENSP00000257860/1-470 NESRRQIQSL TCEVDGLRGT NEALLRQLRE LEEQFALEAG GYQAGAARLE ENSBTAP00000023744/1-469 NESRRQIQSL TCEVDGLRGT NEALLRQLRE LEEQFALEAG GYQAGAARLE ENSTTRP00000004283/1-469 NESRRQIQSL TCEVDGLRGT NEALLRQLRE LEEQFALEAG GYQAGTARLE BACU007996/1-1072 NESRRQIQSL TCEVDGLRGT NEALLRQLRE LEEQFALEAG GYQAGTARLE bmy_05785T0/1-786 NESRRQIQSL TCEVDGLRGT NEALLRQLRE LEEQFALEAG GYQAGTARLE 701 750 ENSP00000257860/1-470 EELRQLKEEM ARHLREYQEL LNVKMALDIE IATYRKLLEG EESRISVPVH ENSBTAP00000023744/1-469 EELRQLKEEM ARHLREYQEL LNVKMALDIE IATYRKLLEG EESRISVPVH ENSTTRP00000004283/1-469 EELRQLKEEM ARHLREYQEL LNVKMALDIE IATYRKLLEG EESRISVPVH BACU007996/1-1072 EELRQLKEEM ARHLREYQEL LNVKMALDIE IATYRKLLEG EESRISVPVH bmy_05785T0/1-786 EELRQLKEEM ARHLREYQEL LNVKMALDIE IATYRKLLEG EESRISVPVH 751 800 ENSP00000257860/1-470 SFASLNIKTT VPEVEPPQDS HSRKTVLIKT IETRNGE-VV TESQKE---- ENSBTAP00000023744/1-469 SFASLSIKTT VPEVEPPQET HSRKMVLIRT IETRDGEQVV TESQKE---- ENSTTRP00000004283/1-469 SFASLSIKTT VPEVEPPQES HSRKMVLIKT IETRDGE-VV TESHKE---- BACU007996/1-1072 SFASLSIKTT VPEVEPPQES HSRKMVLIKT IETRNGERNG RQSNHNNSYK bmy_05785T0/1-786 SFASLSIKTT VPEVEPPQES HSRKMVLIKT IETRDGE--- ---------- 801 850 ENSP00000257860/1-470 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000023744/1-469 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004283/1-469 ---------- ---------- ---------- ---------- ---------- BACU007996/1-1072 VVVVMTTLQA TKDPLLRGVS PTPSKIPVRS QRRPPLPTVK PSALDQENQD bmy_05785T0/1-786 ---------- ---------- ---------- ---------- ---------- 851 900 ENSP00000257860/1-470 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000023744/1-469 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004283/1-469 ---------- ---------- ---------- ---------- ---------- BACU007996/1-1072 PRRLVQKLSS QRPLVDSAGP RLKATRQTEQ SERLVGSTQL RNPLEELRPS bmy_05785T0/1-786 ---------- ---------- ---------- ---------- ---------- 901 950 ENSP00000257860/1-470 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000023744/1-469 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004283/1-469 ---------- ---------- ---------- ---------- ---------- BACU007996/1-1072 PGRQNVGPRP PLQKEAPGTI EFVADPAALA TILSGEGVKS CRLGRQPSLA bmy_05785T0/1-786 ---------- ---------- ---------- ---------- ---------- 951 1000 ENSP00000257860/1-470 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000023744/1-469 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004283/1-469 ---------- ---------- ---------- ---------- ---------- BACU007996/1-1072 QRVLVRGNQG GTIRRGQDAR ASAYLAPRTP THRLDPARAS CFSRLEGPGP bmy_05785T0/1-786 ---------- ---------- ---------- ---------- ---------- 1001 1050 ENSP00000257860/1-470 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000023744/1-469 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004283/1-469 ---------- ---------- ---------- ---------- ---------- BACU007996/1-1072 RGRTLCPQRL EALTSYSVLR RLAIRPKTQF TPLSSAPRVQ QEQIAVRLFD bmy_05785T0/1-786 ---------- ---------- ---------- ---------- ---------- 1051 1100 ENSP00000257860/1-470 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000023744/1-469 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004283/1-469 ---------- ---------- ---------- ---------- ---------- BACU007996/1-1072 QESCIRLQEG PGKPPVSTPY GPHCSRTPNL QEMKMQRISI LQQLLRQEVE bmy_05785T0/1-786 ---------- ---------- ---------- ---------- ---------- 1101 1150 ENSP00000257860/1-470 ---------- ---------- ---------- ---------- --------QR ENSBTAP00000023744/1-469 ---------- ---------- ---------- ---------- --------QH ENSTTRP00000004283/1-469 ---------- ---------- ---------- ---------- --------QR BACU007996/1-1072 GLAEGKCAPL NGGSSLDMVE LQPLLAEISR TLNVPENKSG AFHLSGMLQH bmy_05785T0/1-786 ---------- ---------- ---------- ---------- ---------- 1151 1200 ENSP00000257860/1-470 SELDKS---- ---------- ---------- -----SAHSY ---------- ENSBTAP00000023744/1-469 SELDK----- ---------- ---------- -----SPQSY ---------- ENSTTRP00000004283/1-469 SELDKS---- ---------- ---------- -----STHSY ---------- BACU007996/1-1072 SGLPKPYLPE GCGEPEPCPG AEPEVSLPCP PAEPGPPESY HRRGPEISEL bmy_05785T0/1-786 ---------- ---------- ---------- ---------- ---------- 1201 1250 ENSP00000257860/1-470 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000023744/1-469 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004283/1-469 ---------- ---------- ---------- ---------- ---------- BACU007996/1-1072 STQEQPEASE PCPLGEPGPL QACPQGQTGL PEPSPRVEPG VSEACSLEPR bmy_05785T0/1-786 ---------- ---------- ---------- ---------- ---------- 1251 1300 ENSP00000257860/1-470 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000023744/1-469 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004283/1-469 ---------- ---------- ---------- ---------- ---------- BACU007996/1-1072 SPESSPWPCC SQWAPATTSL TFSSQRPLCA SPPIHSLQSL KPPTGQAGPS bmy_05785T0/1-786 ---------- ---------- ---------- ---------- ---------- 1301 1350 ENSP00000257860/1-470 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000023744/1-469 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004283/1-469 ---------- ---------- ---------- ---------- ---------- BACU007996/1-1072 NLAPRTLALR QRLKACLTAI HHFHEVRLDD ECAFYTSRAP PSGLTRVCTN bmy_05785T0/1-786 ---------- ---------- ---------- ---------- ---------- 1351 1400 ENSP00000257860/1-470 ---------- ---------- ----- ENSBTAP00000023744/1-469 ---------- ---------- ----- ENSTTRP00000004283/1-469 ---------- ---------- ----- BACU007996/1-1072 PVATLLERQD ALVSLRSTAS YACGK bmy_05785T0/1-786 ---------- ---------- -----