KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:21:32 2014 Check: 00 .. Name: ENSTTRP00000016308/1-777 Len: 779 Check: 7747 Weight: 1.00 Name: bmy_03529T0/1-453 Len: 779 Check: 3729 Weight: 1.00 Name: ENSP00000251241/1-779 Len: 779 Check: 9410 Weight: 1.00 Name: ENSBTAP00000023753/1-779 Len: 779 Check: 9986 Weight: 1.00 // 1 50 ENSTTRP00000016308/1-777 MSRFPAVAGR APRRQEEGER SRDLQEERPS AVPIADREEK GCTSQEGGTT bmy_03529T0/1-453 MSRFPAVAGR APRRQEEGEQ SRDLQEERPS AVPIADREDK GCTSQEGGTT ENSP00000251241/1-779 MSRFPAVAGR APRRQEEGER SRDLQEERLS AVCIADREEK GCTSQEGGTT ENSBTAP00000023753/1-779 MSRFPAVAGR APRRQEEGER SRDLQEERPS AGSVADREEK GCTSQEGGTT 51 100 ENSTTRP00000016308/1-777 PTFPIQKQRK KLIQAVRDNS FLIVTGNTGS GKTTQLPKYL YEAGFSQHGM bmy_03529T0/1-453 PTFPIQKQRK KLIQAVRDNS FLIVTGNTGS GKTTQLPKYL YEAGFSQHGM ENSP00000251241/1-779 PTFPIQKQRK KIIQAVRDNS FLIVTGNTGS GKTTQLPKYL YEAGFSQHGM ENSBTAP00000023753/1-779 PTFPIQKQRK KLIQAVRDNS FLIVTGNTGS GKTTQLPKYL YEAGFSQHGM 101 150 ENSTTRP00000016308/1-777 IGVTQPRKVA AISVAQRVAE EMKCTLGSKV GYQVRFDDCS SKETAIKYMT bmy_03529T0/1-453 IGVTQPRKVA AISVAQRVAE EMKCTLGSKV GYQVRFDDCS SKETAIKYMT ENSP00000251241/1-779 IGVTQPRKVA AISVAQRVAE EMKCTLGSKV GYQVRFDDCS SKETAIKYMT ENSBTAP00000023753/1-779 IGVTQPRKVA AISVAQRVAE EMKCTLGSKV GYQVRFDDCS SKETAIKYMT 151 200 ENSTTRP00000016308/1-777 DGCLLKHILG DPNLTKFSVI ILDEAHERTL TTDILFGLLK KLFQEKSPNR bmy_03529T0/1-453 DGCLLKYILG DPNLTKFSVI ILDEAHERTL TTDILFGLLK KLFQEKSPNR ENSP00000251241/1-779 DGCLLKHILG DPNLTKFSVI ILDEAHERTL TTDILFGLLK KLFQEKSPNR ENSBTAP00000023753/1-779 DGCLLKHILG DPNLTKFSVI ILDEAHERTL TTDILFGLLK KLFQEKSPNR 201 250 ENSTTRP00000016308/1-777 KEHLKVVVMS ATMELAKLSA FFGNCPIFDI PGRLYPVREK FCNLIGPRDR bmy_03529T0/1-453 KEHLKVVVMS ATMELAKLSA FFGNCPIFDI PGRLYPVREK FCNLIGPRDR ENSP00000251241/1-779 KEHLKVVVMS ATMELAKLSA FFGNCPIFDI PGRLYPVREK FCNLIGPRDR ENSBTAP00000023753/1-779 KEHLKVVVMS ATMELAKLSA FFGNCPIFDI PGRLYPVREK FCNLIGPRDR 251 300 ENSTTRP00000016308/1-777 ENTAYIQAIV KVTMDIHLNE MAGDILVFLT GQFEIEKSCE LLFQMAESVD bmy_03529T0/1-453 ENTAYIQAIV KVTMDIHLNE MAGDILVFLT GQFEIEKSCL TLLQ------ ENSP00000251241/1-779 ENTAYIQAIV KVTMDIHLNE MAGDILVFLT GQFEIEKSCE LLFQMAESVD ENSBTAP00000023753/1-779 ENTAYIQAIV KVTMDIHLNE MAGDILVFLT GQFEIEKSCE LLFQMAESVD 301 350 ENSTTRP00000016308/1-777 YDYDVQDTTL DGLLILPCYG SMTTDQQRRI FLPPPPGIRK CVISTNISAT bmy_03529T0/1-453 ---------- ---YFLFTY- --ILDQQRRI FLPPPPGIRK CVISTNISAT ENSP00000251241/1-779 YDYDVQDTTL DGLLILPCYG SMTTDQQRRI FLPPPPGIRK CVISTNISAT ENSBTAP00000023753/1-779 YDYDVQDTTL DGLLILPCYG SMTTDQQRRI FLPPPPGIRK CVISTNISAT 351 400 ENSTTRP00000016308/1-777 SLTIDGIRYV VDGGFVKQLN HNPRLGLDIL EVVPISKSEA LQRSGRAGRT bmy_03529T0/1-453 SLTIDGIRYV VDGGFVKQLN HNPRLGLDIL EVVPISKSEA LQRSGRAGRT ENSP00000251241/1-779 SLTIDGIRYV VDGGFVKQLN HNPRLGLDIL EVVPISKSEA LQRSGRAGRT ENSBTAP00000023753/1-779 SLTIDGIRYV VDGGFVKQLN HNPRLGLDIL EVVPISKSEA LQRSGRAGRT 401 450 ENSTTRP00000016308/1-777 SSRKCFRIYS KDFWNQCMPD HVIPDIKRTS LTSVVLTLRC LAIHDVIGFP bmy_03529T0/1-453 SSGKCFRIYS KDFWNQCMPD HVIPEIKRTS LTSVVLTLKC LAIHDVIRFP ENSP00000251241/1-779 SSGKCFRIYS KDFWNQCMPD HVIPEIKRTS LTSVVLTLKC LAIHDVIRFP ENSBTAP00000023753/1-779 SSGKCFRIYS KDFWNQCMPD HVIPEIKRTS LTSVVLTLKC LAIHDVIRFP 451 500 ENSTTRP00000016308/1-777 YLDPPNERLI LEALKQLYQC DAIDRSGHVT RLGLSMVEFP LPPHLTCAVI bmy_03529T0/1-453 YLDPPNERLI LEALKQLYQC DAIDR----- ---------- ---------- ENSP00000251241/1-779 YLDPPNERLI LEALKQLYQC DAIDRSGHVT RLGLSMVEFP LPPHLTCAVI ENSBTAP00000023753/1-779 YLDPPNERLI LEALKQLYQC DAIDRSGHVT RLGLSMVEFP LPPHLTCAVI 501 550 ENSTTRP00000016308/1-777 KAASLDCEDL LLPIAAMLSV ENVFIRPVDP EYQKEAEQRH RELAAKAGGF bmy_03529T0/1-453 ---------- ---------- ---------- ---------- ---------- ENSP00000251241/1-779 KAASLDCEDL LLPIAAMLSV ENVFIRPVDP EYQKEAEQRH RELAAKAGGF ENSBTAP00000023753/1-779 KAASLDCEDL LLPIAAMLSV ENVFIRPVDP EYQKEAEQRH RELAAKAGGF 551 600 ENSTTRP00000016308/1-777 NDFATLAVIF EQCKSSGAPA SWCQKHWIHW RCLFSAFRVE AQLRELIRKL bmy_03529T0/1-453 ---------- ---------- ---------- ---------- ---------- ENSP00000251241/1-779 NDFATLAVIF EQCKSSGAPA SWCQKHWIHW RCLFSAFRVE AQLRELIRKL ENSBTAP00000023753/1-779 NDFATLAVIF EQCKSSGAPA SWCQKHWIHW RCLFSAFRVE AQLRELIRKL 601 650 ENSTTRP00000016308/1-777 KQXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXSVGRTF CTMDGRGSPV bmy_03529T0/1-453 ---------- ---------- ---------- ---------- ---------- ENSP00000251241/1-779 KQQSDFPKET FEGPKHEVLR RCLCAGYFKN VARRSVGRTF CTMDGRGSPV ENSBTAP00000023753/1-779 KQQSDFPRET FEGPKHEVLR RCLCAGYFKN VARRSVGRTF CTMDGRGSPV 651 700 ENSTTRP00000016308/1-777 HIHPSSALHE QETKLEWIIF HEVLVTTKVY ARIVCPIRYE WVRDLLPKLH bmy_03529T0/1-453 ---------- ---------- ---------- ---------- ---------- ENSP00000251241/1-779 HIHPSSALHE QETKLEWIIF HEVLVTTKVY ARIVCPIRYE WVRDLLPKLH ENSBTAP00000023753/1-779 HIHPSSALHE QETKLEWIIF HEVLVTTKVY ARIVCPIRYE WVRDLLPKLH 701 750 ENSTTRP00000016308/1-777 EFNAHDLSSV ARREMREDAR RRWTNKENVK HLKDGIPKEV LKKMQRRNDD bmy_03529T0/1-453 ---------- ---------- ---------- ---------- ---------- ENSP00000251241/1-779 EFNAHDLSSV ARREVREDAR RRWTNKENVK QLKDGISKDV LKKMQRRNDD ENSBTAP00000023753/1-779 EFNAHDLSSV ARREVREDAR RRWTNKENVK HRKDGISKEV LKKMQRRNDD 751 800 ENSTTRP00000016308/1-777 KSISDARARF LER-QQRSQD HSDILK-TG bmy_03529T0/1-453 ---------- ---------- --------- ENSP00000251241/1-779 KSISDARARF LERKQQRTQD HSDTRKETG ENSBTAP00000023753/1-779 KSISDARARF LERKQQRSQD HSDTLKETG