KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:21:32 2014 Check: 00 .. Name: bmy_17125T0/1-259 Len: 382 Check: 5041 Weight: 1.00 Name: BACU005506/1-93 Len: 382 Check: 8511 Weight: 1.00 Name: ENSTTRP00000003564/1-382 Len: 382 Check: 7045 Weight: 1.00 Name: ENSP00000275364/1-381 Len: 382 Check: 3595 Weight: 1.00 Name: ENSBTAP00000023757/1-305 Len: 382 Check: 5379 Weight: 1.00 // 1 50 bmy_17125T0/1-259 ---------- ---------- ---------- ---------- ---------- BACU005506/1-93 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003564/1-382 MSGVLRTLSR CLLPAEAGGA RERRAGGGGA RDAEREARRR SRDIDAGLAR ENSP00000275364/1-381 MSGVVRTLSR CLLPAEAGGA RERRA-GSGA RDAEREARRR SRDIDALLAR ENSBTAP00000023757/1-305 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_17125T0/1-259 ---------- ---------- ---------- -----MAQSS ASRFN----- BACU005506/1-93 ---------- ---------- ---------- -----MKERA ---------- ENSTTRP00000003564/1-382 ERRAVRRLVK ILLLGAGESG KSTFLKQMRI IHGREFDQKA LLEFRDTIFD ENSP00000275364/1-381 ERRAVRRLVK ILLLGAGESG KSTFLKQMRI IHGREFDQKA LLEFRDTIFD ENSBTAP00000023757/1-305 ---------- ---------- -------MRI IHGREFDQKA LLEFRDTIFD 101 150 bmy_17125T0/1-259 ---SGSN--- ------ADPV AYCPDE---- --------AG FLPSPMSYMI BACU005506/1-93 ---QGSRVLV DARDKLGIPW QYSENEKHGM FLMAFENKAG LPVEPATFQL ENSTTRP00000003564/1-382 NILKGSRVLV DARDKLGIPW QYSENEKHGM FLMAFENKAG LPVEPATFQL ENSP00000275364/1-381 NILKGSRVLV DARDKLGIPW QYSENEKHGM FLMAFENKAG LPVEPATFQL ENSBTAP00000023757/1-305 NILKGSRVLV DARDKLGIPW QYSENEKHGM FLMAFENKAG LPVDPATFQL 151 200 bmy_17125T0/1-259 L-PGKS---- ----RGHQPC KAAESPGESV KYFLDNLDRI GQLNYCPSRQ BACU005506/1-93 YVPALSALWR DSGIREAFSR RSEFQL---- ---------- ---------- ENSTTRP00000003564/1-382 YVPALSALWR DSGIREAFSR RSEFQLXXXX XXXXXXXXXX XXXNYFPSKQ ENSP00000275364/1-381 YVPALSALWR DSGIREAFSR RSEFQLGESV KYFLDNLDRI GQLNYFPSKQ ENSBTAP00000023757/1-305 YVPALSALWG DSGIREAFSR RSEFQLGESV KYFLDNLDRI GQLNYFPSKQ 201 250 bmy_17125T0/1-259 DILLARKATK GIVEHDFVIK KIPFKMVDVG GQRSQRQKWF QCFDGITSIL BACU005506/1-93 ---------- ---------- ---------- ---------- ------LIIL ENSTTRP00000003564/1-382 DILLARKATK GIVEHDFVIK KIPFKMVDVG GQRSQRQKWF QCFDGITSIL ENSP00000275364/1-381 DILLARKATK GIVEHDFVIK KIPFKMVDVG GQRSQRQKWF QCFDGITSIL ENSBTAP00000023757/1-305 DILLARKATK GIVEHDFVIK KIPFKMVDVG GQRSQRQKWF QCFDGITSIL 251 300 bmy_17125T0/1-259 FMVSSSEYDQ VLMEDRRTNR LVESMNIFET IVNNKLFFNV SIILFLNKMD BACU005506/1-93 FII------- ---------- ---------- IVPSK----- ---------- ENSTTRP00000003564/1-382 FMVSSSEYDQ VLMEDRRTNR LVESMNIFET IVNNKLFFNV SIILFLNKMD ENSP00000275364/1-381 FMVSSSEYDQ VLMEDRRTNR LVESMNIFET IVNNKLFFNV SIILFLNKMD ENSBTAP00000023757/1-305 FMVSSSEYDQ VLMEDRHTNR LVESMNIFET IVNNKLFFNV SIILFLNKMD 301 350 bmy_17125T0/1-259 LLVEKVKTVS IKKHFPDFKG DPHRLEDVQR YLVQCFDRKR RNRSKPLFHH BACU005506/1-93 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003564/1-382 LLVEKVKTVS IKKHFPDFKG DPHRLEDVQR YLVQCFDRKR RNRSKPLFHH ENSP00000275364/1-381 LLVEKVKTVS IKKHFPDFRG DPHRLEDVQR YLVQCFDRKR RNRSKPLFHH ENSBTAP00000023757/1-305 LLVEKVKTVS IKKHFPDFKG DPHRLEDVQR FLVQCFDRKR RNRSKPLFHH 351 400 bmy_17125T0/1-259 FTTAIDTENI RFVFHAVKDT ILQENLKDIM LQ BACU005506/1-93 ---------- ----HAV--- ---------- -- ENSTTRP00000003564/1-382 FTTAIDTENI RFVFHAVKDT ILQENLKDIM LQ ENSP00000275364/1-381 FTTAIDTENV RFVFHAVKDT ILQENLKDIM LQ ENSBTAP00000023757/1-305 FTTAIDTENI RFVFHAVKDT ILQENLKDIM LQ