KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:21:35 2014 Check: 00 .. Name: bmy_12978T0/1-351 Len: 368 Check: 1524 Weight: 1.00 Name: ENSP00000365253/1-294 Len: 368 Check: 9210 Weight: 1.00 Name: ENSBTAP00000023771/1-299 Len: 368 Check: 256 Weight: 1.00 Name: ENSTTRP00000001150/1-234 Len: 368 Check: 1983 Weight: 1.00 Name: BACU005660/1-271 Len: 368 Check: 2687 Weight: 1.00 // 1 50 bmy_12978T0/1-351 MMGSAQKPGV AGGKQLLTGT SWAVGWVCRG PSVSAEPHSR SATGPEDSGC ENSP00000365253/1-294 ---------- ---------- ---------- ----MRPRA- ----PACAAA ENSBTAP00000023771/1-299 ---------- ---------- ---------- ----MRPRAA PRAPTGAAAA ENSTTRP00000001150/1-234 ---------- ---------- ----AAPRQG SAPEPRPRRR RSRGSGYAPP BACU005660/1-271 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_12978T0/1-351 SGGQLAAHLP QGCGSHCDGG RDEMPQRENA ISQAVDRMAA QPNADALSND ENSP00000365253/1-294 ALGLCSLLLL LAPGHACPAG ---------- --------CA CTDPHTVDCR ENSBTAP00000023771/1-299 ALGLFSFLLL LQPGHACPAG ---------- --------CA CTDPHTVDCR ENSTTRP00000001150/1-234 RRAPRPRRRR RRAGALQPPA AAPARTRVPR --------GL RLHRSAHRGL BACU005660/1-271 ---------- ---------- ---------- ---------- --MPQRENAI 101 150 bmy_12978T0/1-351 ARGSDGVPDP FPLDVRKLLV AGNRIQHIPE GFFIFYGDLV YLDFRNNSLR ENSP00000365253/1-294 DRGLPSVPDP FPLDVRKLLV AGNRIQRIPE DFFIFYGDLV YLDFRNNSLR ENSBTAP00000023771/1-299 DRGLPSVPDP FPLDVRKLLV AGNRIQHIPE DFFIFYGDLV YLDFRNNSLR ENSTTRP00000001150/1-234 PRGLPSVPDP FPLDVRKLLV AGNRIQHIPE GFFIFYGDLV YL-FRNXXXX BACU005660/1-271 SQAVDSVPDP FPLDVRKLLV AGNRIQHIPE GFFIFYGDLV YLDFRNNSLR 151 200 bmy_12978T0/1-351 SLEEGTFSGS AKLAFLDLSY NNLTQLGAGA FRSAGRLVKL SLANNNLAGV ENSP00000365253/1-294 SLEEGTFSGS AKLVFLDLSY NNLTQLGAGA FRSAGRLVKL SLANNNLVGV ENSBTAP00000023771/1-299 SLEEGTFSGS AKLAFLDLSY NNLTQLGAGA FRSAGRLVKL SLANNNLAGV ENSTTRP00000001150/1-234 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XSSAGRLVKL SLANNNLAGV BACU005660/1-271 SLEEGTFSGS AKLAFLDLSY NNLTQLGAGA FRSAGRLVKL SLANNNLTGV 201 250 bmy_12978T0/1-351 HEAAFETLES LQVLELNDNN LRSLNVAALA ALPALRTLRL DGNPWLCDCD ENSP00000365253/1-294 HEDAFETLES LQVLELNDNN LRSLSVAALA ALPALRSLRL DGNPWLCDCD ENSBTAP00000023771/1-299 HEAAFETLES LQVLELNDNN LRSLNVAALT ALPALRTLRL DGNPWLCDCD ENSTTRP00000001150/1-234 HEAAFETLES LQVLELNDNN LRSLNVAALA ALPALRTLRL DGNPWLCDCD BACU005660/1-271 HEAAFETLES LQVLELNDNN LRSLNVAALA ALPALRTLRL DGNPWLCDCD 251 300 bmy_12978T0/1-351 FAHLFSWIQE NVSKLPKGL- ---------- ------DEIQ CSLPMENRRI ENSP00000365253/1-294 FAHLFSWIQE NASKLPKGL- ---------- ------DEIQ CSLPMESRRI ENSBTAP00000023771/1-299 FAHLFSWIQE NVSKLPKGL- ---------- ------DEIQ CSLPMENRRI ENSTTRP00000001150/1-234 FAHLFSWIQE NVSKLPK--- ---------- ---------- ---------- BACU005660/1-271 FAHLFSWIQE NVSKLPKAAL VVLAFLIKES TVGNEGNECG CQGDNLEERE 301 350 bmy_12978T0/1-351 FLHELSEASF SECKFSLSLT DLLIIIFSGV AVSIVAIISS FFLATVVQCF ENSP00000365253/1-294 SLRELSEASF SECRFSLSLT DLCIIIFSGV AVSIAAIISS FFLATVVQCL ENSBTAP00000023771/1-299 FLHELSEASF SECKFSLSLT DLFVIIFSGV AVSIAAIISS FFLATVVQCF ENSTTRP00000001150/1-234 ---------- ---------- ---------- ---------- ---------- BACU005660/1-271 ARRNFEKQKF LGQNYYKEGP EGNDI----R KTNVAQIRMA FRYETLCNEL 351 400 bmy_12978T0/1-351 QRCAPNKGTE DEDEDEDD ENSP00000365253/1-294 QRCAPNKDAE DEDEDKDD ENSBTAP00000023771/1-299 QRCAPNKDTE DEDEDEDD ENSTTRP00000001150/1-234 ---------- -------- BACU005660/1-271 SFLSDAMKSE EITALTK-