KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:21:36 2014 Check: 00 .. Name: ENSTTRP00000000518/1-213 Len: 241 Check: 1479 Weight: 1.00 Name: bmy_01619T0/1-225 Len: 241 Check: 1373 Weight: 1.00 Name: ENSP00000216144/1-215 Len: 241 Check: 6563 Weight: 1.00 Name: BACU003342/1-215 Len: 241 Check: 6563 Weight: 1.00 Name: ENSBTAP00000023774/1-179 Len: 241 Check: 5552 Weight: 1.00 // 1 50 ENSTTRP00000000518/1-213 MPFHPVTAAL MYRGIYTVPN LLSEQRPVDI PEDELEXXXX XXXXXXXXXX bmy_01619T0/1-225 ---------- --SGEWAVRD -RSEVLTCSA PPT---EIRE AFKVFDRDGN ENSP00000216144/1-215 MPFHPVTAAL MYRGIYTVPN LLSEQRPVDI PEDELEEIRE AFKVFDRDGN BACU003342/1-215 MPFHPVTAAL MYRGIYTVPN LLSEQRPVDI PEDELEEIRE AFKVFDRDGN ENSBTAP00000023774/1-179 ---------- ---------- ---------- ------EIRE AFKVFDRDGN 51 100 ENSTTRP00000000518/1-213 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXDGQVD FEEFVTLLGP bmy_01619T0/1-225 GFISKQELGT AMRSLGYMPN EVELEVIIQR LDMDGDGQVD FEEFVTLLGP ENSP00000216144/1-215 GFISKQELGT AMRSLGYMPN EVELEVIIQR LDMDGDGQVD FEEFVTLLGP BACU003342/1-215 GFISKQELGT AMRSLGYMPN EVELEVIIQR LDMDGDGQVD FEEFVTLLGP ENSBTAP00000023774/1-179 GFISKQELGT AMRSLGYMPN EVELEVIIQR LDMDGDGQVD FEEFVTLLGP 101 150 ENSTTRP00000000518/1-213 KLSTSGIPEK FHGTDFDTVF WKCDMQKLTV DELKRLLYDT FCEHLSMKDI bmy_01619T0/1-225 KLSTSGIPEK FHGTDFDTVF WKCDMQKLTV DELKRLLYDT FCEHLSMKDI ENSP00000216144/1-215 KLSTSGIPEK FHGTDFDTVF WKCDMQKLTV DELKRLLYDT FCEHLSMKDI BACU003342/1-215 KLSTSGIPEK FHGTDFDTVF WKCDMQKLTV DELKRLLYDT FCEHLSMKDI ENSBTAP00000023774/1-179 KLSTSGIPEK FHGTDFDTVF WKCDMQKLTV DELKRLLYDT FCEHLSMKDI 151 200 ENSTTRP00000000518/1-213 ENIIMTEEES HLGTAEECPV YVE------- ---------- ---------S bmy_01619T0/1-225 ENIIMTEEES HLGTAEECPV DVEKVQAAPE SIAWLSPSLS GAPRRRAATA ENSP00000216144/1-215 ENIIMTEEES HLGTAEECPV DVE------- ---------- ---------T BACU003342/1-215 ENIIMTEEES HLGTAEECPV DVE------- ---------- ---------T ENSBTAP00000023774/1-179 ENIIMTEEES HLGTAEECPV DVE------- ---------- ---------T 201 250 ENSTTRP00000000518/1-213 CSNQQIRQTC -RKSLI-RLT IAFIISVMLI AANQVVRSGM K bmy_01619T0/1-225 CSNQQIRQTC VRKSLICAFA IAFIISVMLI AANQVLRSGM K ENSP00000216144/1-215 CSNQQIRQTC VRKSLICAFA IAFIISVMLI AANQVLRSGM K BACU003342/1-215 CSNQQIRQTC VRKSLICAFA IAFIISVMLI AANQVLRSGM K ENSBTAP00000023774/1-179 CSNQQIRQTC VRKSLICAFA IAFIISVMLI AANQVLRSGM K