KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:21:41 2014 Check: 00 .. Name: ENSTTRP00000009588/1-375 Len: 375 Check: 9127 Weight: 1.00 Name: ENSBTAP00000023784/1-366 Len: 375 Check: 7716 Weight: 1.00 Name: ENSP00000268164/1-375 Len: 375 Check: 8022 Weight: 1.00 Name: BACU000527/1-334 Len: 375 Check: 6315 Weight: 1.00 Name: bmy_20094T0/1-227 Len: 375 Check: 7129 Weight: 1.00 // 1 50 ENSTTRP00000009588/1-375 MQLQFRSWML AALTLLVVFL IFADISEIEE EIGNSGGRGT IRSAVNSLHS ENSBTAP00000023784/1-366 MQLQFRSWML AALTLLVVFL IFAD------ ---NSGGRGT IRSAVNSLHS ENSP00000268164/1-375 MQLQFRSWML AALTLLVVFL IFADISEIEE EIGNSGGRGT IRSAVNSLHS BACU000527/1-334 ---------- ---------- ---------- ---------- -MSPLFLFFY bmy_20094T0/1-227 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000009588/1-375 KSNRAEVVIN GSSSPAVVDR SNEGFKRNIQ PASAKWRHNQ TLSLRIXXXX ENSBTAP00000023784/1-366 KSNRAEVVIN GSSSPAVVDR SNESIKHNIQ PASAKWRHNQ TLSLRIRKQI ENSP00000268164/1-375 KSNRAEVVIN GSSSPAVVDR SNESIKHNIQ PASSKWRHNQ TLSLRIRKQI BACU000527/1-334 PPSRAEVVIN GSSSPAVVDR SNEGFKRNIQ PASAKWRHNQ TLSLRIRKQI bmy_20094T0/1-227 ----AEVVIN GSSSPAVVDR SNEGFKRNIQ PASAKWRHNQ TLSLRIRKQI 101 150 ENSTTRP00000009588/1-375 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000023784/1-366 LKFLDAEKDI SVLKGTLKPG DIIHYIFDRD STMNVSQNLY ELLPRTSPLK ENSP00000268164/1-375 LKFLDAEKDI SVLKGTLKPG DIIHYIFDRD STMNVSQNLY ELLPRTSPLK BACU000527/1-334 LKFLDAEKDI SVLKGTLKPG DIIHYIFDRD STMNVSQNLY ELLPRTSPLK bmy_20094T0/1-227 LKFLDAEKDI SVLKGTLKPG DIIHYIFDRD STMNVSQNLY ELLPRTSPLK 151 200 ENSTTRP00000009588/1-375 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXCNLAPVQ EYARDVGLKT ENSBTAP00000023784/1-366 NKHFGTCAIV GNSGVLLNSG CGQEIDTHSF VIRCNLAPVQ EYARDVGLKT ENSP00000268164/1-375 NKHFGTCAIV GNSGVLLNSG CGQEIDAHSF VIRCNLAPVQ EYARDVGLKT BACU000527/1-334 NKHFGTCAIV GNSGVLLNSG CGQEIDRHSF VIRCNLAPVQ EYARDVGLKT bmy_20094T0/1-227 NKHFGTCAIV GNSGVLLNSG CGQEIDTHSF VIRCNLAPVQ EYARDVGLKT 201 250 ENSTTRP00000009588/1-375 DLVTMNPSVI QRAFEDLVNA TWREKLLQRL HSLNGSILWI PAFMARGGKE ENSBTAP00000023784/1-366 DLVTMNPSVV QRAFEDLVNA TWREKLLQRL HSLNGSILWI PAFMARGGKQ ENSP00000268164/1-375 DLVTMNPSVI QRAFEDLVNA TWREKLLQRL HSLNGSILWI PAFMARGGKE BACU000527/1-334 DLVTMNPSVI QRAFEDLVNA TWREKLLQRL HSLNGSILWI PAFMARGGKE bmy_20094T0/1-227 DLVTMNPSVI QRAFEDLVNA TWREKLLQRL HSLNGSILWI PAFMARGGKE 251 300 ENSTTRP00000009588/1-375 RVEWVNELIL KHRVNVRTAY PSLRLLHAVR GYWLTNKVHI KRPTTGLLMY ENSBTAP00000023784/1-366 RVEWVNELIL KHHVNVRTAY PSLRLLHAVR GYWLTNKVHI KRPTTGLLMY ENSP00000268164/1-375 RVEWVNELIL KHHVNVRTAY PSLRLLHAVR GYWLTNKVHI KRPTTGLLMY BACU000527/1-334 RVEWVNELIL KHRVNVRTAY PSLRLLHAVR GYWLTNKVHI KRPTTGLLMY bmy_20094T0/1-227 RVEWVNELIL KHRVNVRTAY PSLRLLHAVR G--------- ---------- 301 350 ENSTTRP00000009588/1-375 TLATRFCNQI YLYGFWPFPL DQNQNPVKYH YYDSLKYGYT SQAGPHTMPL ENSBTAP00000023784/1-366 TLATRFCNQI YLYGFWPFPL DQNQNPVKYH YYDSLKYGYT SQASPHTMPL ENSP00000268164/1-375 TLATRFCKQI YLYGFWPFPL DQNQNPVKYH YYDSLKYGYT SQASPHTMPL BACU000527/1-334 TLATRFCNQI YLYGFWPFPL DQNQNPVKYH YYDSLKYGYT SQAGPHTMPL bmy_20094T0/1-227 ---------- ---------- ---------- ---------- ---------- 351 400 ENSTTRP00000009588/1-375 EFKALKNLHE QGALKLTVGQ CDGAT ENSBTAP00000023784/1-366 EFKALKSLHE QGALKLTVGQ CDGAT ENSP00000268164/1-375 EFKALKSLHE QGALKLTVGQ CDGAT BACU000527/1-334 EFKALKSLHE QGALKLTVGQ CDGAT bmy_20094T0/1-227 ---------- ---------- -----