KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:21:43 2014 Check: 00 .. Name: bmy_05468T0/1-528 Len: 546 Check: 8248 Weight: 1.00 Name: ENSTTRP00000013013/1-485 Len: 546 Check: 6093 Weight: 1.00 Name: ENSP00000372335/1-539 Len: 546 Check: 6021 Weight: 1.00 Name: ENSBTAP00000023832/1-432 Len: 546 Check: 263 Weight: 1.00 // 1 50 bmy_05468T0/1-528 ---------- --RALLRAGP RPVRPEAPAG FKGGSFL--C LNKQRCAHPP ENSTTRP00000013013/1-485 MPARRWPAFS PKMASMRESD TGLWLHNKLG ATDELWAPPS IASLLTAKVI ENSP00000372335/1-539 MPGQR-RALS PKMASMRESD TGLWLHNKLG ATDELWAPPS IASLLTAAVI ENSBTAP00000023832/1-432 ---------- --MASMRESD TGLWLHNKLG ATDELWAPPS IASLLTAAVI 51 100 bmy_05468T0/1-528 AQLQSC---- GPEPGVAGGV GRQGLPSLLS WQMKGALTEI IQLATLDSDP ENSTTRP00000013013/1-485 DNIRLCFHGL SSAXXXXXXX XXXXXXXXXX XXMKGALTEI IQLATLDSDP ENSP00000372335/1-539 DNIRLCFHGL SSAVKLKLLL GTLHLPRRTV DEMKGALMEI IQLASLDSDP ENSBTAP00000023832/1-432 DNIRLCFHGL SSAVKLKLLL GTLHLPRRTV DEMKGALTEI IQLASLDSDP 101 150 bmy_05468T0/1-528 WVLMVADILK SFPDTGSLNL DLEEQNPNVQ DILGELREKV NECEASAMLP ENSTTRP00000013013/1-485 WVLMVADILK SFPDTGSLNL DLEEQNPNVQ DILGELREKV NECEASAMLP ENSP00000372335/1-539 WVLMVADILK SFPDTGSLNL ELEEQNPNVQ DILGELREKV GECEASAMLP ENSBTAP00000023832/1-432 WVLMVADILK SFPDSGALNL DLEEQNPNVQ DILGELREKV NECEASAMLP 151 200 bmy_05468T0/1-528 LECQYLNKNA LTTLAGPLTP PVKHFQLKRK PKSATLRAEL LQKSTETAQQ ENSTTRP00000013013/1-485 LECQYLNKNA LTTLAGPLTP PVKHFQLKRK PKSATLRAEL LQKSTETAQQ ENSP00000372335/1-539 LECQYLNKNA LTTLAGPLTP PVKHFQLKRK PKSATLRAEL LQKSTETAQQ ENSBTAP00000023832/1-432 LECQYLNKNA LTTLAGPLTP PVKHFQLKRK PKSATLRAEL LQKSTETAQQ 201 250 bmy_05468T0/1-528 LKRSAGVPFH AKGRGLLRKM DTTTPLKGIP KQAPFRSPTA PSVFSPAGNR ENSTTRP00000013013/1-485 LKRSAGVPFH AKGRGLLRKM DTTTPLKGIP KQAPFRSPTA PSVFSPAGNR ENSP00000372335/1-539 LKRSAGVPFH AKGRGLLRKM DTTTPLKGIP KQAPFRSPTA PSVFSPTGNR ENSBTAP00000023832/1-432 LKRSAGVPFH AKGRGLLRKM DTTTPLKGIP KQAPFRSPTA PSVFSPAGNR 251 300 bmy_05468T0/1-528 TAIPPSRTPL RKERGVKLLD ISELDMVGAG REAKRRRKTL DAEAVEKPAK ENSTTRP00000013013/1-485 TAIPPSRTPL RKERGVKLLD ISELDMVGAG REAKRRRKTL DAEAVEKPAK ENSP00000372335/1-539 TPIPPSRTLL RKERGVKLLD ISELDMVGAG REAKRRRKTL DAEVVEKPAK ENSBTAP00000023832/1-432 TPIPPSRTPL RKERGVKLLD ISELDVVGAG REAKRRRRAL DTEAVEKPAK 301 350 bmy_05468T0/1-528 EETVVENATP DYAAGLVSTQ KLGSLNNEPA LPSTSYLPAT PSVVPASSYI ENSTTRP00000013013/1-485 EETVVENATP DYAAGLVSTQ KLGSLNNEPA LPSTSYLPAT PSVVPASSYI ENSP00000372335/1-539 EETVVENATP DYAAGLVSTQ KLGSLNNEPA LPSTSYLPST PSVVPASSYI ENSBTAP00000023832/1-432 EETVVENATP DYAAGLVSTQ KLGSLNSEPA LPSTSYLPAT PSVVPASSYV 351 400 bmy_05468T0/1-528 PSSEAPPAPP AREASLQASR PPEEPSAPSP ALPAQFKQRA PLYNSGLSPA ENSTTRP00000013013/1-485 PSSEAPPAPP AREASLQASR PPEEPSAPSP ALPAQFKQRA PLYNSGLSPA ENSP00000372335/1-539 PSSETPPAPS SRE----ASR PPEEPSAPSP TLPAQFKQRA PMYNSGLSPA ENSBTAP00000023832/1-432 PSSETPPAPS SRDASLQASR PPEEPGAPSP ALPAQFKQRA PLYNSGPSPA 401 450 bmy_05468T0/1-528 APTPAAPTSP LTPTTPPAVA PATQTPPVAM VAPQAQAQPP TQQQPKKNLS ENSTTRP00000013013/1-485 APTPAAPTSP LTPTTPPAVA PATQTPPVAM VAPQAQAQPP AQQQPKKNLS ENSP00000372335/1-539 TPTPAAPTSP LTPTTPPAVA PTTQTPPVAM VAPQT--QAP AQQQPKKNLS ENSBTAP00000023832/1-432 APPPAAPPSP LTPTTPPAAA PAAQTPPVAM VAPQAQ-QPP AQQQP----- 451 500 bmy_05468T0/1-528 LTREQMFAAQ EMFKTANKVT RPEKALILGF MAGSRENPCQ EQGDVIQIKL ENSTTRP00000013013/1-485 LTREQMFAAQ EMFKTANKVT RPEKALILGF MAGSR----- ---------- ENSP00000372335/1-539 LTREQMFAAQ EMFKTANKVT RPEKALILGF MAGSRENPCQ EQGDVIQIKL ENSBTAP00000023832/1-432 ---------- ---------- ---------- ---------- ---------- 501 550 bmy_05468T0/1-528 SEHTEDLPKS DGQGSTTMLV DTVFEMNYAT GQWTRFKKYK PMANVS ENSTTRP00000013013/1-485 ---------- ---------- ---------- ---------- ------ ENSP00000372335/1-539 SEHTEDLPKA DGQGSTTMLV DTVFEMNYAT GQWTRFKKYK PMTNVS ENSBTAP00000023832/1-432 ---------- ---------- ---------- ---------- ------