KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:21:43 2014 Check: 00 .. Name: ENSP00000369976/1-554 Len: 571 Check: 8311 Weight: 1.00 Name: ENSBTAP00000023842/1-482 Len: 571 Check: 9609 Weight: 1.00 Name: bmy_00901T0/1-531 Len: 571 Check: 2006 Weight: 1.00 Name: BACU008491/1-553 Len: 571 Check: 667 Weight: 1.00 // 1 50 ENSP00000369976/1-554 MPLPWSLALP LLLSWVAGGF GNA------- ---------A SARHHGLLAS ENSBTAP00000023842/1-482 ---------- ---------- ---------- ---------- ---------- bmy_00901T0/1-531 ----MEIDQV IVTSPVHTVA GQSLCGPSCF LSTNMWLFIC SPRDRGLSAS BACU008491/1-553 MPQLWALALP LLLPWVAGGV GNA------- ---------V SPRGRGLSAS 51 100 ENSP00000369976/1-554 ARQPGVCHYG TKLACCYGWR RNSKGVCEAT CEPGCKFGEC VGPNKCRCFP ENSBTAP00000023842/1-482 ---------- ---------- --------AM CEPGCKFGEC VGLNKCRCFP bmy_00901T0/1-531 SLQPGVCRYG TKLACCYGWR RSSKGVCEAT CEPGCKFGEC VGPNKCRCIP BACU008491/1-553 SLQPGVCRYG TKLACCYGWR RGSKGVCEAT CEPGCKFGEC VGPNKCRCIP 101 150 ENSP00000369976/1-554 GYTGKTCSQD VNECGMKPRP CQHRCVNTHG SYKCFCLSGH MLMPDATCVN ENSBTAP00000023842/1-482 GYTGKTCSQD VNECGFKPRL CQHKCVNTHG SYKCFCLSGH MLLPNASCSN bmy_00901T0/1-531 GYTGKTCSQD VNECGLKPRP CQHRCVNTHG SYKCFCLSGH LLMPDATCSN BACU008491/1-553 GYTGKTCSQD VNECGLKPRP CQHRCVNTHG SYKCFCLSGH LLMPDATCSN 151 200 ENSP00000369976/1-554 SRTCAMINCQ YSCEDTEEGP QCLCPSSGLR LAPNGRDCLD IDECASGKVI ENSBTAP00000023842/1-482 SRTCAMTNCQ YSCKDTEEGP CCLCPSPGLC LAPNGRACLD IDECVSDK-L bmy_00901T0/1-531 SRTCAMTNCQ YGCKDTEEGP HCLCPSSGLR LAPNGRACID TDECASDKAV BACU008491/1-553 SRTCAVTNCQ YGCKDTEEGP RCLCPSSGLR LAPNGRACID TDECASDKAV 201 250 ENSP00000369976/1-554 CPYNRRCVNT FGSYYCKCHI GFELQYISGR YDCIDINECT MDSHTCSHHA ENSBTAP00000023842/1-482 CPYNRRCVNT FGSYYCKCHV GFKLKYISGQ YDCVDINECA ANTHTCSLHA bmy_00901T0/1-531 CPHDRRCVNT FGSYYCKCHV GFELKYLSGR YDCVDINECA ADTHTCSLHA BACU008491/1-553 CPHDRRCVNT FGSYYCKCHV GFELKYLSGR YDCVDINECA ADTHTCSLHA 251 300 ENSP00000369976/1-554 NCFNTQGSFK CKCKQGYKGN GLRCSAIPEN SVKEVLRAPG TIKDRIKKLL ENSBTAP00000023842/1-482 NCLNTQGSFK YKCKRGYKGS GLQCALIPEN SVKELLRAPG TIKDRIKKLL bmy_00901T0/1-531 NCLNTQGSFK CKCKQGYKGS GLQCSVIPEN SVKEFLRAPG TIKDRIKKLL BACU008491/1-553 NCLNTQGSFK CKCKQGYKGS GLQCSVIPEN SVKEFLRAPG TIKDRIKKLL 301 350 ENSP00000369976/1-554 AHKNSMKKKA KIKNVTPEPT RTPTPKVNLQ PFNYEEIVSR GGNSHGGKKG ENSBTAP00000023842/1-482 AHKNSMRKKV KMKNIT-EPR GTPTTKVDSE PFSSEESISR DGNPHGEKNR bmy_00901T0/1-531 AHKNNMKKKV KMKNIA-EPG GTPAPKVDSQ PFNSEESVSR DGNPHAEKKR BACU008491/1-553 AHKNNMKKKV KMKNIA-EPG GTPAPKVDSQ PFNSEESVSR DGNPPGEKKR 351 400 ENSP00000369976/1-554 NEEKMKEGLE DEKREEKALK NDIEE-RSLR GDVFFPKVNE AGEFGLILVQ ENSBTAP00000023842/1-482 NENRKKERLE DEKRDE---- NHVEQEQSLH GDVFSPKGNE ASEVDLVLVQ bmy_00901T0/1-531 DEERKKEGLE EEKRDEKALA NHVEEQQSLR GDVFSPKVNE AGEVDLVLVQ BACU008491/1-553 NEERKKEGLE EEKRDEKALA NHVEEQQSLR GDVFSPKVNE AGEVDLVLVQ 401 450 ENSP00000369976/1-554 RKALTSKLEH KADLNISVDC SFNHGICDWK QDREDDFDWN PADRDNAIGF ENSBTAP00000023842/1-482 RKTTSSHLKH KVDLNISVDC TFDHGVCDWK QDIEDDFDWN PVDQDNAVGY bmy_00901T0/1-531 RKATASRLEH R--------- ---------- ---------- ------AVGY BACU008491/1-553 RKATASRLEH R-DLNISVDC SFDHGVCDWK QDIEDDFDWN PADRDNAVGY 451 500 ENSP00000369976/1-554 YMAVPALAGH KKDIGRLKLL LPDLQPQSNF CLLFDYRLAG DKVGKLRVFV ENSBTAP00000023842/1-482 YMAVSALTGQ KKDIGRLKLL LPNLQPHSNF CLLFNYRLAG NKVGKLRVFV bmy_00901T0/1-531 YMAVPVLAGQ KKDIGRLKLV LPDLQPQSNF CLLFHYRLAG NKVGKLRVFV BACU008491/1-553 YMAVPVLAGQ KKDIGRLKLV LPDLQPQSNF CLLFHYRLAG NKVGKLRVFV 501 550 ENSP00000369976/1-554 KNSNNALAWE KTTSEDEKWK TGKIQLYQGT DATKSIIFEA ERGKGKTGEI ENSBTAP00000023842/1-482 KNRNNALAWE KTRSMDEQWR MGKIQLYHRI DTPKSIIFEA ERGKGKTGEI bmy_00901T0/1-531 KNSNNALAWE KTRSTDERWK MGKIQLYQEI DTPKSIIFEA ERGKGKTGEI BACU008491/1-553 KNSNNALAWE KTRSMDERWK MGKIQLYQGI DTPKSIIFEA ERGKGKTGEI 551 600 ENSP00000369976/1-554 AVDGVLLVSG LCPDSLLSVD D ENSBTAP00000023842/1-482 AVDGVFQVSG LCSDGL---- - bmy_00901T0/1-531 AVDGVLLVSG LCPDGLLSVD G BACU008491/1-553 AVDGVLLVSG LCPDGLLSVD G