KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:21:44 2014 Check: 00 .. Name: ENSP00000334767/1-332 Len: 338 Check: 6367 Weight: 1.00 Name: BACU017330/1-299 Len: 338 Check: 9979 Weight: 1.00 Name: ENSBTAP00000023847/1-337 Len: 338 Check: 5982 Weight: 1.00 Name: bmy_03257T0/1-303 Len: 338 Check: 9228 Weight: 1.00 Name: ENSTTRP00000002785/1-321 Len: 338 Check: 498 Weight: 1.00 // 1 50 ENSP00000334767/1-332 MAPAQRCPLC RQTFFCGRGH VYSRKHQRQL KEALERLLPQ VEAARKAIRA BACU017330/1-299 MAPAERCTVC RQTFFCGRGH VYSRKHQRQL KVALERLLPQ VEAARKAVRA ENSBTAP00000023847/1-337 MAPAQRCPLC RQTFFCGRGH VYSRKHQRQL KVALERLLPQ VEAARKAVRA bmy_03257T0/1-303 MASAERCPVC RQTFFCGRGH VYSRKHQRQL KVALERLLPQ VEAARKAVRA ENSTTRP00000002785/1-321 MAPAERCPVC RQTFFCGRGH VYSRKHQRQL KVALERLLPQ VEAARKAVRA 51 100 ENSP00000334767/1-332 AQVERYVPEH ERCCWCLCCG CEVREHLSHG NLTVLYGGLL EHLASPEHKK BACU017330/1-299 AQVERFVPEH ERCCWCLCCG CEVRKHLSHG NLTVLHGGLL EHLASPEHKK ENSBTAP00000023847/1-337 AQVERYVPEH ERWCWCLCCG CEVRKHLSHG NLTVLHGGLL GHLASPEHKK bmy_03257T0/1-303 AQVERYVPEH ERCCWCLCCG CEVRKHLSHG NLTVLHGGLL EHLASPEHKK ENSTTRP00000002785/1-321 AQVERYVPEH ERCCWCLCCG CEVRKHLSHG NLTVLHGGLL EHLASPEHKK 101 150 ENSP00000334767/1-332 ATNKFWWENK AEVQMKEKFL VTPQDYARFK KSMVKGLDSY EEKEDKVIKE BACU017330/1-299 ATNRFWWENK AEFQMKEKFL ISPQDYARFK KSMVKSLDSY EEKEDEVIKE ENSBTAP00000023847/1-337 ATNKFWWENK AEFQMKEKFL ISPQDFARFK KSMVKSLDSY EEKEDEVIKE bmy_03257T0/1-303 XTNRFWWENK AEFQMKEKFL ISPQDYARFK KSMVKSLDSY EEKEDEVIKE ENSTTRP00000002785/1-321 ATNRFWWENK AEFQMKEKFL ISPQDYARFK KSMVKSL--- ---------- 151 200 ENSP00000334767/1-332 MAAQIREVEQ SRQEVVRSVL EPQAVPDPEE GSSAPRSWKG MNSQVASSLQ BACU017330/1-299 MAAQIREVEH SRQEVVRSVL EPQTVPDPEE GSSAPGSWNG TNSQVASTSQ ENSBTAP00000023847/1-337 MAAQIREVEQ SRQEMVRSVL EPQTVPDPEE GSSAPGSRKG TNSQVASTSQ bmy_03257T0/1-303 MAAQIREVEH SRQEVVRSVL EPQTVPDPEE GSSAPGSWNG TNSQVASTSQ ENSTTRP00000002785/1-321 MAAQIREVEH SRQEVVRSVL EPQTVPDPEE GSSAPASWEG TNSQVASTSQ 201 250 ENSP00000334767/1-332 QPSNLDLPPA PELDWMETGP SLTFIG-HQD IPGVGNIHSG ATPPWMIQDE BACU017330/1-299 QPSYVDLPPA PELDWMETGQ PLTFIG-HQD TPGIGNIHSG ATPPWMVQDE ENSBTAP00000023847/1-337 QPSYLDLPPA PELDWMETGQ PLTFIG-HQD TPGIGNIHSG ATPPWMVQDE bmy_03257T0/1-303 QPSYVDLPPA PELDWMETGQ PLTFIG-HQD TPGIGNIHS- ---------- ENSTTRP00000002785/1-321 QPSYVDLPPA PELDWMETGQ PLTFIGHHQD TPGIGNIHSG ATPPWMVQDE 251 300 ENSP00000334767/1-332 EYIAGNQEIG PSYEEFLKEK EKQKLKKLPP DRVGANFDHS SRTSAGWLPS BACU017330/1-299 DCSSGNQQIG PSYEEFLKES INSKLKP--- -QQETNSSHI ERKVNGFLIH ENSBTAP00000023847/1-337 DCSSGNQQIG PSYEEFLKEK EKQKLKKLPP DRVGANFDHS SSTSAGWLPS bmy_03257T0/1-303 ---------- ---------E EKQKLKKLPP DRVGANFDHN SSTSAGWLPS ENSTTRP00000002785/1-321 DCSSGNQQIG PSYEEFLKEK EKQKLKKLPP DRVGANFDHN SSTGAGWLPS 301 350 ENSP00000334767/1-332 FGRVWNNGRR WQSRHQFKTE AAAM-KKQSH TEKS---- BACU017330/1-299 FQPL------ ---------- ---------- -------- ENSBTAP00000023847/1-337 FGRVWNNGRR WQSRHQFKTE AAARNKQQSH KGKTLMAS bmy_03257T0/1-303 FGRVWNNGRR WQSRHQFKTE AAARNKQQPH RKKS---- ENSTTRP00000002785/1-321 FGRVWNNGRR WQSRHQFKTE AAARNKQQSH KKKS----