KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:21:47 2014 Check: 00 .. Name: ENSP00000414920/1-205 Len: 309 Check: 698 Weight: 1.00 Name: bmy_07874T0/1-221 Len: 309 Check: 5386 Weight: 1.00 Name: BACU004120/1-205 Len: 309 Check: 1195 Weight: 1.00 Name: ENSTTRP00000003524/1-291 Len: 309 Check: 2941 Weight: 1.00 Name: ENSBTAP00000023876/1-280 Len: 309 Check: 602 Weight: 1.00 // 1 50 ENSP00000414920/1-205 MATPLGWSKA GSGSVCLALD QLRDVIESQE ELIHQLRNV- ---------- bmy_07874T0/1-221 MATPVGWSPG GSGSVCLAFD QLRDVIESQE ELIHQLRNVR NPYHPSPSLS BACU004120/1-205 MATPVGWSPG GSGSVCLAFD QLRDVIESQE ELIQQLRNV- ---------- ENSTTRP00000003524/1-291 MGTPVGWSQG GSGSVCLAFD QLRDVIEAQE ELIHQLRNV- ---------- ENSBTAP00000023876/1-280 MATPVGWSQG GSGSVCLAFD QLRDVIESQE ELIHQLRNV- ---------- 51 100 ENSP00000414920/1-205 -----MVLQD ENFVSKEEFQ AVEKKLVEEK AAHAKTKVLL AKEEEKLQFA bmy_07874T0/1-221 QALLQMVLQD ENFVSKEEFQ AVENKLVEEK AAHAKTKVLL AKEEEKLQFA BACU004120/1-205 -----MVLQD ENFVSKEEFQ AVEKKLVEEK AAHAKTKVLL AKEEEKLQFA ENSTTRP00000003524/1-291 -----MVLQD ENFVSKEEFQ AVEKKLVEEK AAHAKTKVLL AKEEEKLQFA ENSBTAP00000023876/1-280 -----MILQD ENFVSKEEFQ AVEKKLVEEK AAHAKTKVLL AKEEEKLQFA 101 150 ENSP00000414920/1-205 LGEVEVLSKQ LEKEKLAFEK ALSSVKSKVL QESSKKDQLI TKCNEIESHI bmy_07874T0/1-221 LGEVEVLSKQ LEKEKLAFEK ALSSVKSRAL QESSKKDQLI TKCNEIESHI BACU004120/1-205 LGEVEVLSKQ LEKEKLAFEK ALSSVKSRAL QESSKKDQLI TKCNEIESHI ENSTTRP00000003524/1-291 LGDVEVLSKQ LEKEKLAFEK ALSSAKSRAP QESSKKDQLI TKCNEIESHV ENSBTAP00000023876/1-280 LGEVEVLSKQ LEKEKLAFEK ALSSVKSRAL QESSKKDQLI TKCNEIESHI 151 200 ENSP00000414920/1-205 IKQEDILNGK ENEIKELQQV ISQQKQIFRN HMSD------ ---FRIQKQQ bmy_07874T0/1-221 IKQEDILNGK ESEIKELQQV ISQQKEIFRN HVSD------ ---FRIQKQQ BACU004120/1-205 IKQEDILNGK ENEIKELQQV ISQQKEIFRN HVSD------ ---FRIQKQQ ENSTTRP00000003524/1-291 IKQEDILNGK ENEIKELQQV ISQQKEIFSP CPAGSVAGIT CLTFGSRSSR ENSBTAP00000023876/1-280 IKQEDILNGK ENEIKELQQV ISQQKEIFSP RPAGSVAGIT CLTSGSRSSK 201 250 ENSP00000414920/1-205 ESYMAQVLDQ KHKKASGTRQ ARSHQHPREK ---------- ---------- bmy_07874T0/1-221 ENYMAQVLDQ KHKKASGTRQ TRSRQRPREK ---------- ---------- BACU004120/1-205 ENYMAQVLDQ KHKKASGTRQ TRSRQRPREK ---------- ---------- ENSTTRP00000003524/1-291 RTTWPRCWTR SIRKPRGCVR PGAASVPGKN KMGVSFLLSG CNAQPLPSLL ENSBTAP00000023876/1-280 RTTWPKCWTR SIRKPRGRVR PGAVSVPGKN KMVVAFLLS- CKAQPLPSLL 251 300 ENSP00000414920/1-205 ---------- ---------- ---------- ---------- ---------- bmy_07874T0/1-221 ---------- ---------- ---------- ---------- ---------- BACU004120/1-205 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003524/1-291 WWSPVSSPCY SPPSLLWVVV GAHGVWGCSL GKLLGCLVGT VPSYSWYIPS ENSBTAP00000023876/1-280 WRSPFSSPCY SPGFLPWMIV GTMGVWGCSL GK-------- ----DYLIPS 301 350 ENSP00000414920/1-205 --------- bmy_07874T0/1-221 --------- BACU004120/1-205 --------- ENSTTRP00000003524/1-291 YINNPGY-- ENSBTAP00000023876/1-280 YINSPGYPS