KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:21:49 2014 Check: 00 .. Name: ENSTTRP00000008895/1-172 Len: 1085 Check: 9035 Weight: 1.00 Name: ENSP00000295713/1-985 Len: 1085 Check: 1658 Weight: 1.00 Name: ENSBTAP00000023881/1-971 Len: 1085 Check: 9220 Weight: 1.00 Name: BACU016487/1-1052 Len: 1085 Check: 6605 Weight: 1.00 Name: bmy_02371T0/1-573 Len: 1085 Check: 963 Weight: 1.00 // 1 50 ENSTTRP00000008895/1-172 MTSPAKFKKD KEIIAEYDTQ VKEIRAQLTE QMKCLDQQCE LRVQLLQDLQ ENSP00000295713/1-985 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000023881/1-971 ---------- ---------- ---------- ---------- ---------- BACU016487/1-1052 ---------- ---------- ---------- -MKCLDQQCE LRVQLLQDLQ bmy_02371T0/1-573 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000008895/1-172 DFFRKKAEIE MDYSRNLEKL AERFLAKTRS TKDQQFKKDQ NVLSPVNCWN ENSP00000295713/1-985 ---------- ---------- ---------- ------XKDQ NVLSPVNCWN ENSBTAP00000023881/1-971 ---------- ---------- ---------- ---------- -------CWN BACU016487/1-1052 DFFRKKAEIE MDYSRNLEKL AERFLAKTRS TKDQQFKKDQ NVLSPVNCWN bmy_02371T0/1-573 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000008895/1-172 LLLNQVKRES RDHTTLSDIY LNNIIPRFVQ VSEDSGRLFK KSKEVGQQLQ ENSP00000295713/1-985 LLLNQVKRES RDHTTLSDIY LNNIIPRFVQ VSEDSGRLFK KSKEVGQQLQ ENSBTAP00000023881/1-971 LISQEFSRQK KSYVLKKSKF LNN----YVS DMEDVKFLFS QSKEVGQQLQ BACU016487/1-1052 LLLNQVKRES RDHTTLSDIY LNNIIPRFVQ VSEDSGRLFK KSKEVGQQLQ bmy_02371T0/1-573 ---------- ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000008895/1-172 DDLMKVLNEL YS-------- ---------- ---------- ---------- ENSP00000295713/1-985 DDLMKVLNEL YSVMKTYHMY NADSISAQSK LKEAEKQEEK QIGKSVKQED ENSBTAP00000023881/1-971 DDLMKVLNEL YSVMKTYHMY NADSISAQSK LKEAEKQEEK QIGKSVKQED BACU016487/1-1052 DDLMKVLNEL YSVMKTYHMY NADSISAQSK LKEAEKQEEK QIGKSVKQED bmy_02371T0/1-573 ---------- ---------- ---------- ---------- ---------- 201 250 ENSTTRP00000008895/1-172 ---------- ---------- ---------- ---------- ---------- ENSP00000295713/1-985 RQTPRSPDST ANVRIEEKHV RRSSVKKIEK MKEKRQAKYT ENKLKAIKAR ENSBTAP00000023881/1-971 RQAPRSPDST SNVRIEEKHV RRSSVKKIEK MKEKRQAKYT ENKLKAIKAR BACU016487/1-1052 RQTPRSPDST SNVRIEEKHV RRSSVKKIEK MKEKRQAKYT ENKLKAIKAR bmy_02371T0/1-573 ---------- ---------- ---------- ---------- ---------- 251 300 ENSTTRP00000008895/1-172 ---------- ---------- ---------- ---------- ---------- ENSP00000295713/1-985 NEYLLALEAT NASVFKYYIH DLSDLIDQCC DLGYHASLNR ALRTFLSAEL ENSBTAP00000023881/1-971 NEYLLALEAT NASVFKYYIH DLSDLIDQCC DLGYHASLNR ALRTFLSAEL BACU016487/1-1052 NEYLLALEAT NASVFKYYIH DLSDLID-CC DLGYHASLNR ALRTFLSAEL bmy_02371T0/1-573 ---------- ---------- ---------- ---------- ---------- 301 350 ENSTTRP00000008895/1-172 ---------- ---------- ---------- ---------- ---------- ENSP00000295713/1-985 NLEQSKHEGL DAIENAVENL DATSDKQRLM EMYNNVFCPP MKFEFQPHMG ENSBTAP00000023881/1-971 NLEQSKHEGL DAIENAVENL DATSDKQRLM EMYNNVFCPP MKFEFQPHMG BACU016487/1-1052 NLEQSKHEGL DAIENAVENL DATSDKQRLM EMYNNVFCPP MKFEFQPHMG bmy_02371T0/1-573 ---------- ---------- ---------- ---------- ---------- 351 400 ENSTTRP00000008895/1-172 ---------- ---------- ---------- ---------- ---------- ENSP00000295713/1-985 DMASQLCAQQ PVQSELVQRC QQLQSRLSTL KIENEEVKKT MEATLQTIQD ENSBTAP00000023881/1-971 DMASQLCAQQ PVQSELVQRC QQLQSRLSTL KIENEEVKKT MEATLQTIQD BACU016487/1-1052 DMASQLCAQQ PVQSELVQRC QQLQSRLSTL KIENEEVKKT MEATLQTIQD bmy_02371T0/1-573 ---------- ---------- ---------- ---------- ---------- 401 450 ENSTTRP00000008895/1-172 ---------- ---------- ---------- ---------- ---------- ENSP00000295713/1-985 IVTVEDFDVS DCFQYSNSME SVKSTVSETF MSKPSIAKRR ANQQETEQFY ENSBTAP00000023881/1-971 IVTVEDFDVS DCFQYSNSME SVKSTVSETF MSKPSIAKRR ANQQETEQFY BACU016487/1-1052 IVTVEDFDVS DCFQYSNSME SVKSTVSETF MSKPSIAKRR ANQQETEQFY bmy_02371T0/1-573 ---------- ---------- ---------- ---------- ---------- 451 500 ENSTTRP00000008895/1-172 ---------- ---------- ---------- ---------- ---------- ENSP00000295713/1-985 FTKMKEYLEG RNLITKLQAK HDLLQKTLGE SQRTDCSLA- RRSSTVRKQD ENSBTAP00000023881/1-971 FTKMKEYLEG RNLITKLQAK HDLLQKTLGE SQRTDCSLAS RRSSTVRKQD BACU016487/1-1052 FTKMKEYLEG RNLITKLQAK HDLLQKTLGE SQRTDCSLA- RRSSTVRKQD bmy_02371T0/1-573 ---------- ---------- ---------- ---------- ---------D 501 550 ENSTTRP00000008895/1-172 ---------- -----VNQLG ---------- ---------- ---------- ENSP00000295713/1-985 SSQAIPLVVE SCIRFISRHG LQHEGIFRVS GSQVEVNDIK NAFERGEDPL ENSBTAP00000023881/1-971 SSQAIPLVVE SCIRFISRHG LQHEGIFRVS GSQVEVNDIK NAFERGEDPL BACU016487/1-1052 SSQAIPLVVE SCIRFISRHG LQHEGIFRVS GSQVEVNDIK NAFERGEDPL bmy_02371T0/1-573 SSQAIPLVVE SCIRFISRHG LQHEGIFRVS GSQVEVNDIK NAFERGEDPL 551 600 ENSTTRP00000008895/1-172 ---------- ---------- ---------- --------CL ALS------- ENSP00000295713/1-985 AGDQNDHDMD SIAGVLKLYF RGLEHPLFPK DIFHDLMACV TMDNLQERAL ENSBTAP00000023881/1-971 AGDQNDHDMD SIAGVLKLYF RGLEHPLFPK DIFHDLMACV TMDNLQERAL BACU016487/1-1052 AGDQNDHDLD SIAGVLKLYF RGLEHPLFPK DIFHDLMACV TMDNLQERAL bmy_02371T0/1-573 AGDQNDHDMD SIAGVLKLYF RGLEHPLFPK DIFHDLMACV TMDNLQERAL 601 650 ENSTTRP00000008895/1-172 ---------- ---------- ---------- ---------- ---------- ENSP00000295713/1-985 HIRKVLLVLP KTTLIIMRYL FAFLNHLSQF SEENMMDPYN LAICFGPSLM ENSBTAP00000023881/1-971 HIRKVLLVLP KTTLIIMRYL FAFLNHLSQF SEENMMDPYN LAICFGPSLM BACU016487/1-1052 HIRKVLLVLP KTTLIIMRYL FAFLNHLSQF SEENMMDPYN LAICFGPSLM bmy_02371T0/1-573 HIRKVLLVLP KTTLIIMRYL FAFLNHLSQF SEENMMDPYN LAICFGPSLM 651 700 ENSTTRP00000008895/1-172 ---------- ---------- ---------- ---------- ---------- ENSP00000295713/1-985 SVPEGHDQVS CQAHVNELIK TIIIQHENIF PSPRELEGPV YSRGGSMEDY ENSBTAP00000023881/1-971 SVPEGHDQVS CQAHVNELIK TIIIQHENVF PNPRELEGPV YSRGGSTEDY BACU016487/1-1052 SVPEGHDQVS CQAHVNELIK TIIIQHENIF PNPRELEGPI YSRGGSTEDY bmy_02371T0/1-573 SVPEGHDQVS CQAHVNELIK TIIIQHENIF PNPRELEGPI YSRGGSTEDY 701 750 ENSTTRP00000008895/1-172 ---------- ---------- ---------- ---------- ---------- ENSP00000295713/1-985 CDSPHGETTS VEDSTQDVTA EHHTSDDECE PIEAIAKFDY VGRTARELSF ENSBTAP00000023881/1-971 CDSPHGETTS AEDSTQDVTT EHHTSDDECE PIEAIAKFDY VGRTARELSF BACU016487/1-1052 CDSPHGETTS AEDSTQDVAA EHHTSDDECE PIEAIAKFDY VGRTARELSF bmy_02371T0/1-573 CDSPHGETTS AEDSTQDVAA EHHTSDDECE PIEAIAKFDY VGRTARELSF 751 800 ENSTTRP00000008895/1-172 ---------- ---------- ---------- ---------- ---------- ENSP00000295713/1-985 KKGASLLLYQ RASDDWWEGR HNGIDGLIPH QYIVVQDTED GVVERSSPKS ENSBTAP00000023881/1-971 KKGASLLLYQ RASDDWWEGR HNGIDGLIPH QYIVVQDTED GVVERSSPKS BACU016487/1-1052 KKGASLLLYQ RASDDWWEGR HNGIDGLIPH QYIVVQDTED GVVERSSPKS bmy_02371T0/1-573 KKGASLLLYQ RASDDWWEGR HNGIDGLIPH QYIVVQDTED GVVERSSPKS 801 850 ENSTTRP00000008895/1-172 ---------- ---------- ---------- ---------- ---------- ENSP00000295713/1-985 EIEVISEPPE EKVTARAGAS CPSGGHVADI YLANIN---- ---------K ENSBTAP00000023881/1-971 EIEVISEPPE EKVTARAGAS CPSGGHVADI YLANIN---- ---------K BACU016487/1-1052 EIEVISEPPE EKVTARAGAS CPSGGHVADI YLANINNTLH LENSKPTTAK bmy_02371T0/1-573 EIEVISEPPE EKVTARAGAS CPSGGHVADI YLANIN---- ---------K 851 900 ENSTTRP00000008895/1-172 ---------- ---------- ---------- ---------- ---------- ENSP00000295713/1-985 QRKRPESGSI RKTFRSDSHG LSSSLTDSSS PGVGASCRPS SQPIMSQSLP ENSBTAP00000023881/1-971 QRKRPESGSI RKTFRSDGHG LSSSLTDSAS PGVGASCRPS SQPILSQSLP BACU016487/1-1052 QRKRPESGSI RKTFRSDGHG LSSSLTDSAS PGVGASCRPS SQPILSQSLP bmy_02371T0/1-573 QRKRPESGSI RKTFRSDGHG LSSSLTDSAS PGVGASCRPS SQPILSQSLP 901 950 ENSTTRP00000008895/1-172 ---------- ---------- ---------- ---------- ---------- ENSP00000295713/1-985 KEGPDKCSIS GHGSLNSISR HSSLKNRLDS PQIRKTATAG RSKSFNNHRP ENSBTAP00000023881/1-971 KEGPDKCSIS GHGSLNSISR HSSLKNRLDS PQIRKTVTAG RSKSFNNHRP BACU016487/1-1052 KEGPDKCSIS GHGSLNSISR HSSLKNRLDS PQIRKTVTAG RSKSFNNHRP bmy_02371T0/1-573 KEGPDKCSIS GHGSLNSISR HSSLKNRLDS PQIRKTVTAG RSKSFNNHRP 951 1000 ENSTTRP00000008895/1-172 ---------- ---------- ---------- ---------- ---------- ENSP00000295713/1-985 MDPEVIAQDI EATMNSALNE LRELERQSSV KHTPDVVLDT LEPLKTSPVV ENSBTAP00000023881/1-971 MDPEVIAQDI EATMNSALNE LRELERQSSV KHTPDVVLDT LEPLKTSPVV BACU016487/1-1052 MDPEVIAQDI EATMNSALNE LRELERQSSV KHTPDVVLDT LEPLKTSPVV bmy_02371T0/1-573 MDPEVIAQDI EATMNSALNE LRELERQSSV KHTPDVVLDT LEPLKTSPVV 1001 1050 ENSTTRP00000008895/1-172 ---------- ---------- ---------- ---------- ---------- ENSP00000295713/1-985 APTSEPSSPL HTQLLKDPEP AFQRSASTAG DIACAFRPVK SVKMAAPVKP ENSBTAP00000023881/1-971 APTSEPSSPL HTQLLKDPEP AFQRSASTAG DIACAFRPVK SVKMAAPVKP BACU016487/1-1052 APTSEPSSPL HTQLLKDPEP TFQRSASTAG DIACAFRPVK SVKMAAPVKP bmy_02371T0/1-573 APTSEPSSPL HTQLLKDPEP TFQRSASTAG DIACAFRPVK SVKMAAPVKP 1051 1100 ENSTTRP00000008895/1-172 ---------- ---------- ---------- ----- ENSP00000295713/1-985 PATRPKPTVF PKTNATSPGV NSSTSPQSTD KSCTV ENSBTAP00000023881/1-971 PATRPKPAVF PKTNATSPGV NSSASAQSTD KSCTV BACU016487/1-1052 PATRPKPTVF PKTNATSPGV NSSASPQPTD KSCTV bmy_02371T0/1-573 PATRPKPTVF PKTNATSPGV NSSASPQPTD KSCTV