KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:21:50 2014 Check: 00 .. Name: ENSP00000345985/1-789 Len: 843 Check: 5830 Weight: 1.00 Name: bmy_11324T0/1-519 Len: 843 Check: 1434 Weight: 1.00 Name: ENSBTAP00000023907/1-787 Len: 843 Check: 222 Weight: 1.00 Name: BACU018002/1-322 Len: 843 Check: 5054 Weight: 1.00 Name: ENSTTRP00000012703/1-791 Len: 843 Check: 5070 Weight: 1.00 // 1 50 ENSP00000345985/1-789 ---------- ---------- ---------- ---------- ---------- bmy_11324T0/1-519 MAKTGSLAVN LLGKTLGEAE RTRKAESSAD ASLCIHTLRI PPLRRRSLSD ENSBTAP00000023907/1-787 ---------- ---------- ---------- ---------- ---------- BACU018002/1-322 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012703/1-791 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000345985/1-789 --METLLGGL LAFGMAFAVV DACPKYCVCQ NLSESLGTLC PSKGLLFVPP bmy_11324T0/1-519 QTMETLLGGL LAFGMAFAVV DACPKYCVCQ NLSESLGTLC PSKGLLFVPP ENSBTAP00000023907/1-787 --METLLGGL LAFGMAFAVV DACPKYCVCQ NLSESLGTLC PSKGLLFVPP BACU018002/1-322 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012703/1-791 --METLLGGL LAFVMAFTVV DACPKYCVCQ NLSESLGTLC PSKGLLFVPP 101 150 ENSP00000345985/1-789 DIDRRTVELR LGGNFIIHIS RQDFANMTGL VDLTLSRNTI SHIQPFSFLD bmy_11324T0/1-519 DIDRRTVELR LGGNFIIHIG RQDFANMTGL VDLTLSRNTI SHIQPFSFLD ENSBTAP00000023907/1-787 DIDRRTVELR LGGNFIIHIG RQDFANMTGL VDLTLSRNTI SHIQPFSFLD BACU018002/1-322 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012703/1-791 DIDRRTVELR LGGNFIIHIG RQDFANMTGL VDLTLSRNTI SHIQPFSFLD 151 200 ENSP00000345985/1-789 LESLRSLHLD SNRLPSLGED TLRGLVNLQH LIVNNNQLGG IADEAFEDFL bmy_11324T0/1-519 LESLRSLHLD SNRLPSLGED TLRGLVNLQH LIVNNNQLGG IADEAFEDFL ENSBTAP00000023907/1-787 LESLRSLHLD SNRLPSLGED TLRGLVNLQH LIVNNNQLGG IAEEAFEDFL BACU018002/1-322 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012703/1-791 LESLRSLHLD SNRLPSLGED TLRGLVNLQH LIVNNNQLGG IADEAFEDFL 201 250 ENSP00000345985/1-789 LTLEDLDLSY NNLHGLPWDS VRRMVNLHQL SLDHNLLDHI AEGTFADLQK bmy_11324T0/1-519 LTLEDLDLSY NNLHGLPWGS VRRMVNLHQL SLDHNLLDHI TEGTFADLQK ENSBTAP00000023907/1-787 LTLEDLDLSY NNLHGLPWGS VRRMINLHQL SLDHNLLDHI AEGTFTDLQK BACU018002/1-322 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012703/1-791 LTLEDLDLSY NNLHGLPWGS VRRMVNLHQL SLDHNLLDHI TEGTFTDLQK 251 300 ENSP00000345985/1-789 LARLDLTSNR LQKLPPDPIF ARSQASALTA TPFAPPLSFS FGGNPLHCNC bmy_11324T0/1-519 LARLDLTSNR LQKLPPDPIF AHSQASALTA TPFAPPLSFS FGGNPLHCNC ENSBTAP00000023907/1-787 LARLDLTSNR LQKLPPDPIF ARSQASALTA TPFAPPLSFS FGGNPLHCNC BACU018002/1-322 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012703/1-791 LARLDLTSNR LQKLPPDPIF AHSQASALTA TPFAPPLSFS FGGNPLHCNC 301 350 ENSP00000345985/1-789 ELLWLRRLER DDDLETCGSP GGLKGRYFWH VREEEFVCEP PLITQHTHKL bmy_11324T0/1-519 ELLWLRRLER DDDLETCGSP GGLKGRYFWH VREEEFVCEP PLITQHTHKL ENSBTAP00000023907/1-787 ELLWLRRLER DDDLETCGSP GGLKGRYFWH VREEEFVCEP PLITQHTHKL BACU018002/1-322 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012703/1-791 ELLWLRRLER DDDLETCGSP GGLKGRYFWH VREEEFVCEP PLITQHTHKL 351 400 ENSP00000345985/1-789 LVLEGQAATL KCKAIGDPSP LIHWVAPDDR LVGNSSRTAV YDNGTLDIFI bmy_11324T0/1-519 LVLEGQAATL KCKAIGDPSP LIHWVAPDDR LVGNSSRTAV YDNGTLDILI ENSBTAP00000023907/1-787 LVLEGQAATL KCKAIGDPSP LIHWVAPDDR LVGNSSRTAV YDNGTLDILI BACU018002/1-322 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012703/1-791 LVLEGQAATX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 401 450 ENSP00000345985/1-789 TTSQDSGAFT CIAANAAGEA TAMVEVSIVQ LPHLSNSTSR TAPPKSRLSD bmy_11324T0/1-519 TTSQDSGAFT CIAANAAGEA TATVEVSIVQ LPHLSNSTSR TASPKSRLSD ENSBTAP00000023907/1-787 TTSQDSGAFT CIAANAAGEA TATVEVSIVQ LPHLSNSTSR AAPPKSRLSD BACU018002/1-322 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012703/1-791 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 451 500 ENSP00000345985/1-789 ITGSSKTSRG GGGSGGGEPP KSPPERAVLV SEVTTTSALV KWSVSKSAPR bmy_11324T0/1-519 ITGSSKTSRG GGGSGGGEPP KSPPERAVLV SDVTTTSALV KWSVSKSAPR ENSBTAP00000023907/1-787 ITGSSKTSRG GGGSGGGEPP KSPPERAVLV SDVTTTSALV KWSVSKSAPR BACU018002/1-322 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012703/1-791 ITGSSKTSRG GGGSGGGEPP KSPPERAVLV SDVTTTSALV KWSVSKSAPR 501 550 ENSP00000345985/1-789 VKMYQLQYNC SDDEVLIYRM IPASNKAFVV NNLVSGTGYD LCVLAMWDDT bmy_11324T0/1-519 VKMYQLQYNC SDDEVLIYR- ---------- ---------- ---------- ENSBTAP00000023907/1-787 VKMYQLQYNC SDDEVLIYRM IPASNKAFVV NNLVSGTGYD LCVLAMWDDT BACU018002/1-322 ---------- ---------M IPASNKAFVV NNLVSGTGYD LCVLAMWDDT ENSTTRP00000012703/1-791 VKMYQLQYNC SDDEVLIYRM IPASNKAFVV NNLVSGTGYD LCVLAMWDDT 551 600 ENSP00000345985/1-789 ATTLTATNIV GCAQFFTKAD YPQCQSMHSQ ILGGTMILVI GGIIVATLLV bmy_11324T0/1-519 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000023907/1-787 ATTLTATNIV GCAQFFTKAD YTQCQSMHSQ ILGGTMILVI GGIIVATLLV BACU018002/1-322 ATTLTATNIV GCAQFFTKAD YPQCQSLHSQ ILGGTMILVI GGIIVATLLV ENSTTRP00000012703/1-791 ATTLTATNIV GCAQFFTKAD YPQCQSMHSQ ILGGTMILVI GGIIVATLLV 601 650 ENSP00000345985/1-789 FIVILMVRYK VCNHEAPSKM AAAVSNVYSQ TNGAQPPPPS SAPAGAPPQG bmy_11324T0/1-519 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000023907/1-787 FIVILMVRYK VCNQEGTGKP AAAVTNVHSQ TNGAQPPALG SVPSGAPVPG BACU018002/1-322 FIVILMVRYK VCNQEGAGKP AATVSNVHSQ TNGAQPPALG STPSGAPAPG ENSTTRP00000012703/1-791 FIVILMVRYK VCNQEGTGKP AATVSNMHSQ TNGAQPPALG SAPSGAPAPG 651 700 ENSP00000345985/1-789 PPKVVVRNEL LDFTASLARA SDSSSSSSLG SGEAAGLGRA PWRIPPSAPR bmy_11324T0/1-519 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000023907/1-787 PPKVVVRNEL MDFSASLARG SDSSSSSSLG IGE--GLGRG PWRLPPPAPR BACU018002/1-322 PPKVVVRHEL MDFSAGLARG SDSSSSSSLG MGEAAGLGRG PWRLPPPAPR ENSTTRP00000012703/1-791 PPKVVVGHEL MDFSAGLARG SDSSSSSSLG FGEAAGLGRG PWRLPPPAPR 701 750 ENSP00000345985/1-789 PKPSLDRLMG AFASLDLKSQ RKEELLDSRT PAGRGAGTSA RGHHSDREPL bmy_11324T0/1-519 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000023907/1-787 PKPNLDRLMG AFASLDLKSQ RKEELLDSRT PGGRGSGTSA KGHPSDREPL BACU018002/1-322 PKPNLDRLMG AFASLDLKSQ RKEELLDSRT PGGRGSGTSA RGHPSDREPL ENSTTRP00000012703/1-791 PKPNLDRLMG AFASLDLKSQ RKEELLDSRT PGGRGSGTSA RGHPSDREPL 751 800 ENSP00000345985/1-789 LGPPAARARS LLPLPLEGKA KRSHSFDMGD FAAAAAGGVV PGGYSPPRKV bmy_11324T0/1-519 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000023907/1-787 LGPPAARARS LLPLPLEGKA KRSHSFDMGD FAAAATGGVA PGGYSPPRRV BACU018002/1-322 LGPPAARARS LLPLPLEGKA KRSHSFDMGD FAAAAAGGVA PGGYSPPRKV ENSTTRP00000012703/1-791 LGPPAARARS LLPLPLEGKA KRSHSFDMGD FAAAAAGGVA PGGYSPPRRV 801 850 ENSP00000345985/1-789 SNIWTKRSLS VNGMLLPFEE SDLVGARGTF GSSEWVMEST V-- bmy_11324T0/1-519 ---------- ---------- ---------- ---------- --- ENSBTAP00000023907/1-787 SNIWTKRSLS VNGMLLPFEE SGLVGARGTF GSSEWVMEST V-- BACU018002/1-322 SNIWTKRSLS VNGMLLPFEE SDLAGARGTF GSSEWVMEST V-- ENSTTRP00000012703/1-791 SNIWTKRSLS VNGMLLPFEE SDLAGARGTF GSSEWVMEST VAW