KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:21:52 2014 Check: 00 .. Name: ENSTTRP00000002412/1-758 Len: 791 Check: 3787 Weight: 1.00 Name: ENSP00000343871/1-760 Len: 791 Check: 3123 Weight: 1.00 Name: ENSBTAP00000023929/1-740 Len: 791 Check: 4756 Weight: 1.00 Name: bmy_01388T0/1-510 Len: 791 Check: 5475 Weight: 1.00 Name: BACU017442/1-775 Len: 791 Check: 8744 Weight: 1.00 // 1 50 ENSTTRP00000002412/1-758 ---------- -------VSS QHNAGARGRR PAVFRMAEWD ADLDHIIPSS ENSP00000343871/1-760 ---------- ------MIPN QHNAGAGSHQ PAVFRMAVLD TDLDHILPSS ENSBTAP00000023929/1-740 ---------- ---------- ---------- -----MAEWD ASLDHVIPSS bmy_01388T0/1-510 ---------- ---------- ---------- ---------- ---------- BACU017442/1-775 MIVSRALGAP GEEQPTQVSS QHNAGARGRR PAVFRMAEWD ANLDHIIPSS 51 100 ENSTTRP00000002412/1-758 ILPPLWAKLL VGFVSLVCFA RSYDGDFVFD DSEAIVNNKD LRAETPLGDL ENSP00000343871/1-760 VLPPFWAKLV VGSVAIVCFA RSYDGDFVFD DSEAIVNNKD LQAETPLGDL ENSBTAP00000023929/1-740 LLPPFWAKFL VGFASLMCFA RSYDGDFVFD DSEAIVNNKD LRAETPLGDL bmy_01388T0/1-510 ---------- ---------- ---------- ---------- ---------- BACU017442/1-775 VLPPLWAKLL VGFVSLVCFA RSYDGDFVFD DSEAIVNNKD LRAETPLGDL 101 150 ENSTTRP00000002412/1-758 WHHDFWGNQL SSNTSHKSYR PLTVLVFRMN CYLSGGFHPL SFHVVNILLH ENSP00000343871/1-760 WHHDFWGSRL SSNTSHKSYR PLTVLTFRIN YYLSGGFHPV GFHVVNILLH ENSBTAP00000023929/1-740 WHHDFWGSRL SSNTSHKSYR PLTVLTFRMN YYLSGGFHPV SFHVVNIALH bmy_01388T0/1-510 ---------- ---------- ---------- ---------- ---------- BACU017442/1-775 WHHDFWGTRL SSNTSHKSYR PLTVLTFRMN YYLSGGFHPM SFHVVNILLH 151 200 ENSTTRP00000002412/1-758 SGISILLVDV FSVLFGGLQY TSKGRRLNLA PRSSLLAALL FAVHPVHTEC ENSP00000343871/1-760 SGISVLMVDV FSVLFGGLQY TSKGRRLHLA PRASLLAALL FAVHPVHTEC ENSBTAP00000023929/1-740 GGVCVLLVDV FSVLFGGLQY TSRGRRLNLA PRSSLLAALL FAVHPVHTEC bmy_01388T0/1-510 ---------- ---------- ---------- ---------- ---------- BACU017442/1-775 SGVSILLVDV FSVLFGGLQY TSKGRRLNLA PRSSLLAALL FAVHPVHTEC 201 250 ENSTTRP00000002412/1-758 VAAVVGCADL LAALFFLLSF LGYCKALRET NKEGTQ-STF WVLLSILLGA ENSP00000343871/1-760 VAGVVGRADL LCALFFLLSF LGYCKAFRES NKEGAHSSTF WVLLSIFLGA ENSBTAP00000023929/1-740 VAGVVGRADL LGALFFLLSF LGYCKAFRET NKEGTH-STF WVLLSILLGA bmy_01388T0/1-510 ---------- ---------- ---------- ---------- ---------- BACU017442/1-775 VAAVVGCADL LAALFFLLSF LGYCKALKET NKEGTH-STF WVLLSILLGA 251 300 ENSTTRP00000002412/1-758 VAMLCKEQGI TVLGLNAVFD ILVIGKLNVL ELVRKVLQKD RSLENTGVLR ENSP00000343871/1-760 VAMLCKEQGI TVLGLNAVFD ILVIGKFNVL EIVQKVLHKD KSLENLGMLR ENSBTAP00000023929/1-740 VAMLCKEQGI TVLGLNAIFD ILVIGKLNVL EIVRKLLRKD RSLESPGMLR bmy_01388T0/1-510 ---------- ---------- ---------- -MVRKVLRKD KSLENTGVLR BACU017442/1-775 VAMLCKEQGI TVLGLNAIFD ILVIGKLNVL EMVRKVLRKD KSLENAGMLR 301 350 ENSTTRP00000002412/1-758 TEGLLFRMSL LALGGTGVLY VRWKIMGTGP PAFTEVDNPA SFASSMLVRA ENSP00000343871/1-760 NGGLLFRMTL LTSGGAGMLY VRWRIMGTGP PAFTEVDNPA SFADSMLVRA ENSBTAP00000023929/1-740 TGGLLFRMTL LALGGAGVLY VRWKIMGTGP PVFTEVDNPA SFADSVLVRA bmy_01388T0/1-510 TEGLLFRMSL LALGGTGVLY VRWKIMGTGP PAFTEVDNPA SFASSMLVRA BACU017442/1-775 TEGLLFRMSL LALGGTGVLY VRWKIMGTGP PAFTEVDNPA SFASSMLVRA 351 400 ENSTTRP00000002412/1-758 INYNYYYSLN AWLLLCPWWL CFDWSMGCIP LIKSVGDWRV IALAALWFCL ENSP00000343871/1-760 VNYNYYYSLN AWLLLCPWWL CFDWSMGCIP LIKSISDWRV IALAALWFCL ENSBTAP00000023929/1-740 INYNYYYSLN AWLLLCPWWL CFDWSMGCIP LIKSVGDWRV IALAALWFCL bmy_01388T0/1-510 VNYNYYYSLN AWLLLCPWWL CFDWSMGCIP LIKSAGDWRA VALAALWFCL BACU017442/1-775 VNYNYYYSLN AWLLLCPWWL CFDWSMGCIP LIKSAGDWRA VALAALWFCL 401 450 ENSTTRP00000002412/1-758 IGLICQALCS EDSHKRRILT LGLGLLIIPF LPASNLFFRV GFVVAERVLY ENSP00000343871/1-760 IGLICQALCS EDGHKRRILT LGLGFLVIPF LPASNLFFRV GFVVAERVLY ENSBTAP00000023929/1-740 IGLICQALCS EDSHKRRILT LGLGFLIIPF LPASNLFFRV GFVVAERVLY bmy_01388T0/1-510 IGLIRQALCS EDSHKRRILT LGLGFLIIPF LPASNLFFRV GFVVAERVLY BACU017442/1-775 IGLIRQALCS EDSHKRRILT LGLGFLIIPF LPASNLFFRV GFVVAERVLY 451 500 ENSTTRP00000002412/1-758 LPSAGYCMLL TFGFGVLSKH TKKKKLIXXX XXXXXXXXXX XXXXXXXXXX ENSP00000343871/1-760 LPSVGYCVLL TFGFGALSKH TKKKKLIAAV VLGILFINTL RCVLRSGEWR ENSBTAP00000023929/1-740 LPSAGYCMLL TFGFAALSKH TKKKKLIAAL ILGILFLNTL RCVVRSGEWR bmy_01388T0/1-510 LPSAGYCMLL TFGFGVLSKH TKKKKLIAAF VLGILFINTL RCVIRSGAWR BACU017442/1-775 LPSAGYCMLL TFGFGVLSKH TKKKKLIAAF VLGILFINTL RCVIRSGAWR 501 550 ENSTTRP00000002412/1-758 XXXXXXXXXX XVCPLNAKVH YNVGKNLADK GNQTAAIRYY REAVRLNPKY ENSP00000343871/1-760 SEEQLFRSAL SVCPLNAKVH YNIGKNLADK GNQTAAIRYY REAVRLNPKY ENSBTAP00000023929/1-740 SEDHLFRSAL SVCPLNAKVH YNVGKNLADK GNQTAAIRYY REAVRLNPKY bmy_01388T0/1-510 SEEQLFRSAL SVCPLNAKVH YNVGKNLADK GNQTAAIRYY REAVRLNPKY BACU017442/1-775 SEEQLFRSAL SVCPLNAKVH YNVGKNLADK GNQTAAIRYY REAVRLNPKY 551 600 ENSTTRP00000002412/1-758 VHAMNNLGNI LKERNELQEA EELLSLAVQI QPDFAAAWMN LGIVQNSLKR ENSP00000343871/1-760 VHAMNNLGNI LKERNELQEA EELLSLAVQI QPDFAAAWMN LGIVQNSLKR ENSBTAP00000023929/1-740 VHAMNNLGNI LKERNELQEA EELLSLAVQI QPDFAAAWMN LGIVQNSLKR bmy_01388T0/1-510 VHAMNNLGNI LKERNELQEA EELLSLAVQI QPDFAAAWMN LGIVQNSLKR BACU017442/1-775 VHAMNNLGNI LKERNELQEA EELLSLAVQI QPDFAAAWMN LGIVQNSLKR 601 650 ENSTTRP00000002412/1-758 FQAAEQSYRT AIKHRRKYPD CYYNLGRL-- -------YAD LNRHVDALNA ENSP00000343871/1-760 FEAAEQSYRT AIKHRRKYPD CYYNLGRL-- -------YAD LNRHVDALNA ENSBTAP00000023929/1-740 FQAAEQSYRT AIKHRRKYPD CYYNLGRL-- -------YAD LNRHVDALNA bmy_01388T0/1-510 FQAAEQSYRT AIKHRRKYPD CYYNLGRLLF FQGIVCEYAD LNRHVDALNA BACU017442/1-775 FQAAEQSYRT AIKHRRKYPD CYYNLGRL-- -------YAD LNRHVDALNA 651 700 ENSTTRP00000002412/1-758 WRNATVLKPE HSLAWNNMII LLDNT----- -GNLAQAEAV GREALELIPN ENSP00000343871/1-760 WRNATVLKPE HSLAWNNMII LLDNT----- -GNLAQAEAV GREALELIPN ENSBTAP00000023929/1-740 WRNATVLKPE HSLAWNNMII LLDNT----- -GNLAQAEAV GREALELIPN bmy_01388T0/1-510 WRNATVLKPE HSLAWNNMII LLDNTGVEKR FGNLAQAEAV GREALELIPN BACU017442/1-775 WRNATVLKPE HSLAWNNMII LLDNT----- -GNLAQAEAV GREALELIPN 701 750 ENSTTRP00000002412/1-758 DHSLMFSLAN VLGKSQKYKE SEALFLKAIK AHPNTASYHG NLAVLYHRWG ENSP00000343871/1-760 DHSLMFSLAN VLGKSQKYKE SEALFLKAIK ANPNAASYHG NLAVLYHRWG ENSBTAP00000023929/1-740 DHSLMFSLAN VLGKSQKYKE SEALFLKAIK AHPNTASYHG NLAVLYHRWG bmy_01388T0/1-510 DHSLMFSLAN VLGKSQKYKE SEALFLKAIK AHPNTASYHG NLAVLYHRWG BACU017442/1-775 DHSLMFSLAN VLGKSQKYKE SEALFLKAIK AHPNTASYHG NLAVLYHRWG 751 800 ENSTTRP00000002412/1-758 HLDLAKKHYE ISLRLDPMAS GTKENYGLLR RKLEQMQKKN V ENSP00000343871/1-760 HLDLAKKHYE ISLQLDPTAS GTKENYGLLR RKLELMQKKA V ENSBTAP00000023929/1-740 HLDLAKKHYE ISLRLDPTAS GTKENYGLLR RKLEQMQKKN V bmy_01388T0/1-510 HLDLAKKHYE ISLRLDPMAS GTKENYGLLR RKLEQMQKKN V BACU017442/1-775 HLDLAKKHYE ISLRLDPMAS GTKENYGLLR RKLEQMQKKN V