KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:21:52 2014 Check: 00 .. Name: BACU001437/1-289 Len: 434 Check: 5062 Weight: 1.00 Name: bmy_11301T0/1-429 Len: 434 Check: 1676 Weight: 1.00 Name: ENSP00000469686/1-407 Len: 434 Check: 9910 Weight: 1.00 Name: ENSTTRP00000006800/1-402 Len: 434 Check: 7728 Weight: 1.00 Name: ENSBTAP00000023945/1-399 Len: 434 Check: 7212 Weight: 1.00 // 1 50 BACU001437/1-289 ---------- ---------- ---------- ---------- ---------- bmy_11301T0/1-429 MDSPCQPQPL SQALPQLPGS VSEPL--EPS RARMGVESYL PCPLLSSYHR ENSP00000469686/1-407 MDSPCQPQPL SQALPQLPGS SSEPLEPEPG RARMGVESYL PCPLLPSYHC ENSTTRP00000006800/1-402 MDSPCQPQPL SQALPQLPGS VSEPL--EPS RARMGVESYL PCPLLSSYHR ENSBTAP00000023945/1-399 MDSPCQPQPL SQALPQLPGS VSEPL--EPS RARMGVESYL PCPLL-SYHR 51 100 BACU001437/1-289 ---------- ---------- ---------- ---------- --------MV bmy_11301T0/1-429 PGXPGEASAG SGTPRATATS TTASPLREGF GGQDGGELRP LQSEGAAALV ENSP00000469686/1-407 PGVPSEASAG SGTPRATATS TTASPLRDGF GGQDGGELRP LQSEGAAALV ENSTTRP00000006800/1-402 PGGPGEASAG SGTPRATATS TTASPLREGF GGQDGGELRP LQSEGAAALV ENSBTAP00000023945/1-399 PGAPTEASAG SGTPRATATS TTGSPLREGF GAQDGGELRP LQSEGAAALV 101 150 BACU001437/1-289 TKGCQRLAAQ GARPEAPKRK WAEDGGDAPA PSKRPWARQE NQEAEAEGE- bmy_11301T0/1-429 TKGCQRLAAQ GARPEAPKRK WAEDGGDAPA SSKRPWARQE NQEAEAEGE- ENSP00000469686/1-407 TKGCQRLAAQ GARPEAPKRK WAEDGGDAPS PSKRPWARQE NQEAEREGGM ENSTTRP00000006800/1-402 TKGCQRLAAQ GARPEAPKRK WAEDGGDAPA PSKRPWARQE NQEAETEGE- ENSBTAP00000023945/1-399 TKGCQRLAAQ GARPEAPKRK WAEDGGDAPA PSKRPWARQE NQEA--EGE- 151 200 BACU001437/1-289 --GCSSGSGE ASAGLREEVL PAAPERLALG YTVPCMRYDG ICAKDSFLGA bmy_11301T0/1-429 --GCSSGSGE ASAGLREEVL PAAPERLALD YIVPCMRYYG ICVKDSFLGA ENSP00000469686/1-407 SCSCSSGSGE ASAGLMEEAL PSAPERLALD YIVPCMRYYG ICVKDSFLGA ENSTTRP00000006800/1-402 --GCSSGSGE ASAGLREEVL PAAPERLALD YIVPCMRYYG ICVKDSFLGA ENSBTAP00000023945/1-399 --GCSSGSGE ASAGLREEVL PAAPERLALD YIVPCMRYYG ICVKDSFLGA 201 250 BACU001437/1-289 ALGGRVLAE- ---------- ------QQAI LPRSIRGEQI AWVEGHEPGY bmy_11301T0/1-429 ALGGQVLAEV EALKRGGRLR DGQLVSQRAI PPRSIRGDQI AWVEGHEPGC ENSP00000469686/1-407 ALGGRVLAEV EALKRGGRLR DGQLVSQRAI PPRSIRGDQI AWVEGHEPGC ENSTTRP00000006800/1-402 ALGGRVLAEV EALKRGGRLR DGQLVSQRAI PPRSIRGDQI AWVEGHEPGC ENSBTAP00000023945/1-399 ALGGQVLAEV EALKRGGRLR DGQLVSQRAI PPRSIRGDQI AWVEGHEPGC 251 300 BACU001437/1-289 LSISALMAHV DAVIRHCAGR LGSYVINGRT KAMVACYPGN GLGYVRHVDN bmy_11301T0/1-429 RSIGALMAHV DAVIRHCAGR LGSYVINGRT KAMVACYPGN GLGYVRHVDN ENSP00000469686/1-407 RSIGALMAHV DAVIRHCAGR LGSYVINGRT KAMVACYPGN GLGYVRHVDN ENSTTRP00000006800/1-402 RSIGALMAHV DAVIRHCAGR LGSYVINGRT KAMVACYPGN GLGYVRHVDN ENSBTAP00000023945/1-399 QSIGALMAHV DAVIRHCAGR LGSYVINGRT KAMVACYPGN GLGYVRHVDN 301 350 BACU001437/1-289 PHGDGRCITC IYYLNQNWDV KVHGGLLQIF PEGRPVVANI EPLFDRLLIF bmy_11301T0/1-429 PHGDGRCITC IYYLNQNWDV KVHGGLLQIF PEGRPVVANI EPLFDRLLIF ENSP00000469686/1-407 PHGDGRCITC IYYLNQNWDV KVHGGLLQIF PEGRPVVANI EPLFDRLLIF ENSTTRP00000006800/1-402 PHGDGRCITC IYYLNQNWDV KVHGGLLQIF PEGRPVVANI EPLFDRLLIF ENSBTAP00000023945/1-399 PHGDGRCITC IYYLNQNWDV KVHGGLLQIF PEGRPVVANI EPLFDRLLIF 351 400 BACU001437/1-289 WSDRRNPHEV KPAYATRYAI TVWYFDAKER AAAKDKYQLA SG-QKGVQVP bmy_11301T0/1-429 WSDRRNPHEV KPAYATRYAI TVWYFDAKER AAAKDKYQLG TGFPNGVPLP ENSP00000469686/1-407 WSDRRNPHEV KPAYATRYAI TVWYFDAKER AAAKDKYQLA SG-QKGVQVP ENSTTRP00000006800/1-402 WSDRRNPHEV KPAYATRYAI TVWYFDAKER AAAKDKYQLA SG-QKGVQVP ENSBTAP00000023945/1-399 WSDRRNPHEV KPAYATRYAI TVWYFDAKER AAAKDKYQLA SG-QKGVQVP 401 450 BACU001437/1-289 VSQPTTPT-- ---------- ---------- ---- bmy_11301T0/1-429 QVLPVPCTSL GLKPPHQSLT ESCHSFFPIF AYLP ENSP00000469686/1-407 VSQPPTPT-- ---------- ---------- ---- ENSTTRP00000006800/1-402 VSQPTTPT-- ---------- ---------- ---- ENSBTAP00000023945/1-399 VSQPTTPT-- ---------- ---------- ----