KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:21:54 2014 Check: 00 .. Name: ENSP00000376896/1-155 Len: 212 Check: 8828 Weight: 1.00 Name: ENSTTRP00000011212/1-155 Len: 212 Check: 9265 Weight: 1.00 Name: ENSBTAP00000023970/1-155 Len: 212 Check: 8159 Weight: 1.00 Name: bmy_09033T0/1-201 Len: 212 Check: 8408 Weight: 1.00 Name: BACU017762/1-155 Len: 212 Check: 9198 Weight: 1.00 // 1 50 ENSP00000376896/1-155 MVLSGALCFR MKDSALKVLY LHNNQLLAGG LHAGKVIKGE EISVVPNRWL ENSTTRP00000011212/1-155 MVLSGALCFR MKDATLKVLY LQDNQLQAGA LQAGKVIKGE EISVVPNRYL ENSBTAP00000023970/1-155 MVLSGALCFR MKDAALKVLY LHDNQLLAGG LQAGKVIKGE EISVVPNRSL bmy_09033T0/1-201 ---------- MKDAKLKVLY LHDNQLQAGG LQAGKVIKG- EISVVPNRSL BACU017762/1-155 MVLSGALCFR MKDARLKGLY LHDNQLQAGG LQAGKVIKGE EISVVPSQSL 51 100 ENSP00000376896/1-155 DASLSPVILG VQGGSQCLSC GVGQEPTLTL E--------- ---------- ENSTTRP00000011212/1-155 DAKLSPVILG VQGGSQCLSC GMEQEPTLKL E--------- ---------- ENSBTAP00000023970/1-155 DAKLSPVILG VHSGSQCLSC GTGQEPTLKL E--------- ---------- bmy_09033T0/1-201 DAKLSPVILG VQGGSQCLSC GTGQEPTLKL EVGPVGAASS RGFTKSKMLI BACU017762/1-155 DAKLSPVMLG VQGGSQCLSC GTGQEPTLKL E--------- ---------- 101 150 ENSP00000376896/1-155 ---------- ---------- ---------- --------PV NIMELYLGAK ENSTTRP00000011212/1-155 ---------- ---------- ---------- --------PV NIMELYHSAE ENSBTAP00000023970/1-155 ---------- ---------- ---------- --------PV NIMELYHSAE bmy_09033T0/1-201 PRLPGLLSLQ GSVNYGSASL CLGASSYPSP TCRALCLQPV NIMELYHSAE BACU017762/1-155 ---------- ---------- ---------- --------PV NIMELYHSAE 151 200 ENSP00000376896/1-155 ESKSFTFYRR DMGLTSSFES AAYPGWFLCT VPEADQPVRL TQLPENGGWN ENSTTRP00000011212/1-155 ESKRFTFYRR DTGLTSSFEV ATYPGWFLCT MPEVDQPLRV TQLPKDTSLD ENSBTAP00000023970/1-155 KSKKFTFYRR DTGLTSSFES AAYPGWFLCT VPEADQPLQI TQLPKDTSWD bmy_09033T0/1-201 ESKRFTFYRR DTGLTSSFEL AAYPGWFYCT VPEADQPLRV TQLLKDTSWD BACU017762/1-155 ESKRFTFYWR DTGFTSSFEL AAYPGWFFCT VPEADQPLRV TQLLKDTSWD 201 250 ENSP00000376896/1-155 APITDFYFQQ CD ENSTTRP00000011212/1-155 GPITDFYFQQ CD ENSBTAP00000023970/1-155 NPIIDFYFQQ CD bmy_09033T0/1-201 GPITDFYFQQ CD BACU017762/1-155 GPITDFYFQQ YD