KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:21:57 2014 Check: 00 .. Name: ENSBTAP00000023994/1-583 Len: 606 Check: 6610 Weight: 1.00 Name: ENSTTRP00000010268/1-568 Len: 606 Check: 8032 Weight: 1.00 Name: ENSP00000310006/1-579 Len: 606 Check: 7089 Weight: 1.00 Name: bmy_22023T0/1-599 Len: 606 Check: 7555 Weight: 1.00 Name: BACU005082/1-584 Len: 606 Check: 810 Weight: 1.00 // 1 50 ENSBTAP00000023994/1-583 -------PPS APGGVIAYIS SSSSASSPAS CHSEGSENSF QSASSSVPSS ENSTTRP00000010268/1-568 ---------- ---GVIAYIS SSSSASSPAS CHSEGSENSF Q--SSSVPSS ENSP00000310006/1-579 -------MEV NAGGVIAYIS SSSSASSPAS CHSEGSENSF QSSSSSVPSS bmy_22023T0/1-599 MESRHKTNRY AVGGVIAYIS SSSSASSPAS CHSEGSENSF QSSSSSVPSS BACU005082/1-584 MESRHKTNRY AVGGVIAYIS SSSSASSPAS CHSEGSENSF QSSSSSVPSS 51 100 ENSBTAP00000023994/1-583 PNSTHSDSNG NPKNGDLSSI EGILKNDRID CSMKTSKSSA PGVTKSHSGV ENSTTRP00000010268/1-568 PASTNADNNG NPKNGHLSNT EGILKDDRID CSMKTSKSSA PGMTKSHSSV ENSP00000310006/1-579 PNSSNSDTNG NPKNGDLANI EGILKNDRID CSMKTSKSSA PGMTKSHSGV bmy_22023T0/1-599 PTSXNSDNNG NPKNGDLSNI EGILKNDRID CSMKTSKSSA PGMTKSHSAV BACU005082/1-584 PTSTNSDNNG NPKNGDLSNI EGILKNDRID CSMKTSKSSA PGMTKSHSAV 101 150 ENSBTAP00000023994/1-583 T--------- ------KFSG MVLLCKVCGD VASGFHYGVH ACEGCKGFFR ENSTTRP00000010268/1-568 T--------- ------KFSG MVLLCKVCGD VASGFHYGVH ACEGCKGFFR ENSP00000310006/1-579 T--------- ------KFSG MVLLCKVCGD VASGFHYGVH ACEGCKGFFR bmy_22023T0/1-599 TMLNLVSRTE YLLVEREFSG MVLLCKVCGD VASGFHYGVH ACEGCKGFFR BACU005082/1-584 T--------- ------KFSG MVLLCKVCGD VASGFHYGVH ACEGCKGFFR 151 200 ENSBTAP00000023994/1-583 RSIQQNIQYK KCLKNENCSI MRMNRNRCQQ CRFKKCLSVG MSRDAIAVRF ENSTTRP00000010268/1-568 RSIQQNIQYK KCLKNENCSI MRMNRNRCQQ CRFKKCLSVG MSRD--AVRF ENSP00000310006/1-579 RSIQQNIQYK KCLKNENCSI MRMNRNRCQQ CRFKKCLSVG MSRD--AVRF bmy_22023T0/1-599 RSIQQNIQYK KCLKNENCSI MRMNRNRCQQ CRFKKCLSVG MSRD--AVRF BACU005082/1-584 RSIQQNIQYK KCLKNENCSI MRMNRNRCQQ CRFKKCLSVG MSRD--AVRF 201 250 ENSBTAP00000023994/1-583 GRIPKREKQR MLIEMQSAMR TMMDSQLSGR LHSDPLADHH EQIALPAQEQ ENSTTRP00000010268/1-568 GRIPKREKQR MLIEMQSAMK TMMNSQFSGH LQNDQLVEHH EQTALPAQEQ ENSP00000310006/1-579 GRIPKREKQR MLIEMQSAMK TMMNSQFSGH LQNDTLVEHH EQTALPAQEQ bmy_22023T0/1-599 GRIPKREKQR MLIEMQSAMK TMMNSQFSGH LQNDPLVEHH EQTALPAQEQ BACU005082/1-584 GRIPKREKQR MLIEMQSAMK TMMNSQFNGH LQNDPSVEHQ EQTALPAQEQ 251 300 ENSBTAP00000023994/1-583 PRPKPQLESD SSKSSSPSSS DFAKEEVIGM VTRAHKDTFM YNQEPRESSA ENSTTRP00000010268/1-568 LRPKPQLEQE NIKSSS-PSS DFAKEEVIGM VTRAHKDTFM YNQEQRENSA ENSP00000310006/1-579 LRPKPQLEQE NIKSSSPPSS DFAKEEVIGM VTRAHKDTFM YNQEQQENSA bmy_22023T0/1-599 LRPKPQLEQE NIKSSA-PXS DFAKEEVIGM VTRAHKDTFM YNQEQRENSA BACU005082/1-584 LRPKPQLEQE NIKSSA-PSS DFAKEEVIGM VTRAHKDTFM YNQEQRENSA 301 350 ENSBTAP00000023994/1-583 ETAALPR-ER LPKSLEQYSV NHEHCVGGPH GRFPCADSAQ HLGGHYKGRS ENSTTRP00000010268/1-568 ETVQPQR-ER IPKNMEQYNL NHDRCGSGLS SHFPCSESQQ HLGGQYKGRN ENSP00000310006/1-579 ESMQPQRGER IPKNMEQYNL NHDHCGNGLS SHFPCSESQQ HLNGQFKGRN bmy_22023T0/1-599 ETAQPQR-ER IPKNLEQYNL NHDRCGGGLS SHFPCSESQQ HLGGQYKGRS BACU005082/1-584 ETAQPPR-EQ IPKSVEQYNL NDDRCGSGLS SHFPCSESQQ HLGAQYRGRS 351 400 ENSBTAP00000023994/1-583 GVHYPGGHAV CVAGGHCVSF SGAYTQRACD RVSIDGFSQN ENKNGFLCNT ENSTTRP00000010268/1-568 VMHYANGHAI CITNGHCVNF SNAYTQRVCD RVSIDGCSQN ENENSYLCNT ENSP00000310006/1-579 IMHYPNGHAI CIANGHCMNF SNAYTQRVCD RVPIDGFSQN ENKNSYLCNT bmy_22023T0/1-599 VMHYANGHAI CITNGHCVNF SNAYTQRACD RVSIDGCSQN ENKNSYLCNA BACU005082/1-584 AMPYANGRAV CVTNGHCVNF SNAYAQRVCD RMSVDGCSRN ENKNSYLCSA 401 450 ENSBTAP00000023994/1-583 GARMHLVCPM SKSPYVDPHK SGHEIWEEFS MSFTPAVKEV VEFAKRIPGF ENSTTRP00000010268/1-568 GGRMHLVCPM NKSPYVDPHK SGHEIWEEFS MSFTPAVKEV VEFAKRIPGF ENSP00000310006/1-579 GGRMHLVCPL SKSPYVDPHK SGHEIWEEFS MSFTPAVKEV VEFAKRIPGF bmy_22023T0/1-599 GGRMHLVCPM NKSPYVDPHK SGHEIWEEFS MSFTPAVKEV VEFAKRIPGF BACU005082/1-584 GGRMHLVCPM NKSPYVDPHK SGHEIWEEFS MSFTPAVKEV VEFAKRIPGF 451 500 ENSBTAP00000023994/1-583 RDLSQHDQVN LLKAGTFEVL MVRFASLFDA KERTVTFLSG KKYSVDDLHS ENSTTRP00000010268/1-568 RDLSQHDQVN LLKAGTFEXX XXXXXXXXXX XXXXXXXLSG KKYSV-DLHS ENSP00000310006/1-579 RDLSQHDQVN LLKAGTFEVL MVRFASLFDA KERTVTFLSG KKYSVDDLHS bmy_22023T0/1-599 RDLSQHDQVN LLKAGTFEVL MVRFASLFDA KERTVTFLSG KKYSVDDLRS BACU005082/1-584 RDLSQHDQVN LLKAGTFEVL MVRFASLFDA KERTVTFLSG KKYSVDDLHS 501 550 ENSBTAP00000023994/1-583 MGAGDLLNSM FEFSEKLNAL QLSDEEMSLF TAVVLSLQLS ADRSGIENVN ENSTTRP00000010268/1-568 MGAGDLLNSM FEFSEKLNAL QLSDEEMSLF TAVVL---VS ADRSGIENVN ENSP00000310006/1-579 MGAGDLLNSM FEFSEKLNAL QLSDEEMSLF TAVVL---VS ADRSGIENVN bmy_22023T0/1-599 MGAGDLLNSM FEFSEKLNAL RLRGEEMSLF TAVVL---VS ADRSGIENVN BACU005082/1-584 MGAGDLLNSM FEFSEKLNAL RLSGEEMSLF TAVVL---VS ADRSGIENVN 551 600 ENSBTAP00000023994/1-583 SVEALQETLI RALRTLIMKN HPNEASIFTK LLLKLPDLRS LNNMHSEELL ENSTTRP00000010268/1-568 SVEALQETLI RALRTLIMKN HPNEASIFTK LLLKLPDLRS LNNMHSEELL ENSP00000310006/1-579 SVEALQETLI RALRTLIMKN HPNEASIFTK LLLKLPDLRS LNNMHSEELL bmy_22023T0/1-599 SVEALQETLI RALRTLIMKN HPNEASIFTK LLLKLPDLRS LNNMHSEELL BACU005082/1-584 SVEALQETLI RALRTLIMKN HPNEASIFTK LLLKLPDLRS LNNMHSEELL 601 650 ENSBTAP00000023994/1-583 AFKVHP ENSTTRP00000010268/1-568 AFKVHP ENSP00000310006/1-579 AFKVHP bmy_22023T0/1-599 AFKVHP BACU005082/1-584 AFKVHP