KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:21:57 2014 Check: 00 .. Name: ENSP00000254770/1-450 Len: 457 Check: 7922 Weight: 1.00 Name: ENSBTAP00000023996/1-433 Len: 457 Check: 2569 Weight: 1.00 Name: bmy_04915T0/1-341 Len: 457 Check: 4259 Weight: 1.00 Name: BACU012571/1-396 Len: 457 Check: 1682 Weight: 1.00 Name: ENSTTRP00000004312/1-446 Len: 457 Check: 4973 Weight: 1.00 // 1 50 ENSP00000254770/1-450 MGETMSKRLK LHLGGEAEME ERAFVNPFPD YEAAAGALLA SGAAEETGCV ENSBTAP00000023996/1-433 ---------- --------ME DRAFPNPFPD YEAAAER--- --QAEEPPCS bmy_04915T0/1-341 ----MSRRLK LQLGGDADME ERAFPNPFPD V--------- --PAEEPPCA BACU012571/1-396 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004312/1-446 MGETMSRRLK LQLGGDADME ERAFPNPFPD YEAAAAV--- --PAEEPPRA 51 100 ENSP00000254770/1-450 RPPATTDEPG LPFHQDGKII HNFIRRIQTK IKDLLQQMEE GLKTADPHDC ENSBTAP00000023996/1-433 RTPLSPEELG LPFHSDGKII NNFTRRIQTK IKDLLQQMEE GLKTADPHDC bmy_04915T0/1-341 RPQLTRDELG LPFHSDGKII NNFTRRIQTK IKDLLQQMEE GLKTADPHDC BACU012571/1-396 ---------- -MFSFGSQII NNFTRRIQTK IKDLLQQMEE GLKTADPHDC ENSTTRP00000004312/1-446 RSQLTPDELG LPFHSDGKII NNFTRRIQTK IKDLLQQMEE GLKTADPHDC 101 150 ENSP00000254770/1-450 SAYTGWTGIA LLYLQLYRVT CDQTYLLRSL DYVKRTLRNL NGRRVTFLCG ENSBTAP00000023996/1-433 SAYTGWTGIA LLYLQLYRVT CDQSYLLRSL DYVKRTLRNL NGRRVTFLCG bmy_04915T0/1-341 SAYTGWTGIA LLYLQLYRVT CDQTYLLRSL DYVKRTLRNL NGRRVTFLCG BACU012571/1-396 SAYTGWTGIA LLYLQLYRVT CDQTYLLRSL DYVKRTLRNL NGRRVTFLCG ENSTTRP00000004312/1-446 SAYTGWTGIA LLYLQLYRVT CDQTYLLRSL DYVKRTLRNL NGRRVTFLCG 151 200 ENSP00000254770/1-450 DAGPLAVGAV IYHKLRSDCE SQECVTKLLQ LQRSVVCQES DLPDELLYGR ENSBTAP00000023996/1-433 DAGPLAVGAV VYHKLKSDCE SQECITKLLQ LQRTIVCRDS DLPDELLYGR bmy_04915T0/1-341 DAAPLAIGAV VYHKLTSDCE SQECITKLLQ LQRAIFCRDS DLPDELLQGR BACU012571/1-396 DAGPLAVGAV VYHKLKSDCE SQECITKLLQ LQRAIVCRDS DLPDELLQGR ENSTTRP00000004312/1-446 DAGPLAVGAV VYHKLRSDYE SQECITKLLQ LQRAIVCRDS DLPDELLQGR 201 250 ENSP00000254770/1-450 AGYLYALLYL NTEIGPGTVC ESAIKEVVNA IIESGKTLSR EERKTERCPL ENSBTAP00000023996/1-433 AGYLYALLYV NTEIGPGAVC ESAIKEVVNA IIESGKALSK EEKKVERCPL bmy_04915T0/1-341 AGYLYALLYV STEMGPGAVC GSAVKEVVDA IIESGKALSR EEKKAERCPL BACU012571/1-396 AGYLYALLYV STEMGPGAVC GSAVKEVVDA IIESGKALSR EEKKAERCPL ENSTTRP00000004312/1-446 AGYLYALLYV STEMGPGAVC GSAVKEVVDA IIESGKALSR EEKKAERCPL 251 300 ENSP00000254770/1-450 LYQWHRKQYV GAAHGMAGIY YMLMQPAAKV DQETLTEMVK PSIDYVRHKK ENSBTAP00000023996/1-433 LYQWHRKQYV GAAHGMAGIY YMLMQPAAKV DQETLTEMVK PSIDYMRHKR bmy_04915T0/1-341 LYQWHRKQYV GAAHGMAGIY YMLMQPAAKV DQETLTEMVK PSIDYMRHKR BACU012571/1-396 LYQWHRKQYV GAAHGMAGIY YMLMQPAAKV DQETLTEMVK PSIDYTRHKR ENSTTRP00000004312/1-446 LYQWHRKQYV GAAHGMAGIY YMLMQPAAKV DQETLTEMVK PSIDYMRHKR 301 350 ENSP00000254770/1-450 FRSGNYPSSL SNETDRLVHW CHGAPGVIHM LMQAYKVFKE EKYLKEAMEC ENSBTAP00000023996/1-433 FRSGNYPSSL SNETDRLVHW CHGAPGVIHV LMQAHKVFKE EKYLKDAVEC bmy_04915T0/1-341 FRSGNYPSSL SNETDRLVHW CHGAPGVIHM LMQVYKVFKE EKYLKDAMEC BACU012571/1-396 FRSGNYPSSL SNETDRLVHW CHGAPGVIHM LMQAYKVFKE EKYLKDAMEC ENSTTRP00000004312/1-446 FRSGNYPSSL SNETDRLVHW CHGAPGVIHM LMQAYKVFKE EKYLKEAMEC 351 400 ENSP00000254770/1-450 SDVIWQRGLL RKGYGICHGT AGNGYSFLSL YRLTQDKKYL YRACKFAEWC ENSBTAP00000023996/1-433 SDVIWQRGLL RKGYGICHGT AGNGYSFLSL YHITQDKKYL YRACKFAEWC bmy_04915T0/1-341 SDVIWQ---- ---------- ---------- ---------- ---------- BACU012571/1-396 SDVIWQRGLL RKGYGICHGT AGNGYSFLSL YHLTRDKKYL YRACKFAEWC ENSTTRP00000004312/1-446 SDVIWQRGLL RKGYGICHGT AGNGYSFLSL YHLTRDKKYL YRACKFAEWC 401 450 ENSP00000254770/1-450 LDYGAHGCRI PDRPYSLFEG MAGAIHFLSD VLGPETSRFP AFELDSSKRD ENSBTAP00000023996/1-433 LEYGAHGCRI PDRPYSLFEG MAGTIHFLSD ILAPEASRFP AFELSSSQRD bmy_04915T0/1-341 ---------- ---------- ---------- ---------- ---------- BACU012571/1-396 LDYGTHGCRI PDRPYSLFEG MAGTVHFLSD ILAPEASRFP AFELGSPQTD ENSTTRP00000004312/1-446 LEYGTHGCRI PDRPYSLFEG MAGTVHFLSD ILAPEASRFP AFELGSPQRD 451 500 ENSP00000254770/1-450 ------- ENSBTAP00000023996/1-433 TKVQKD- bmy_04915T0/1-341 ------- BACU012571/1-396 TEVQKDY ENSTTRP00000004312/1-446 T------