KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:21:58 2014 Check: 00 .. Name: ENSP00000364133/1-503 Len: 531 Check: 1518 Weight: 1.00 Name: ENSBTAP00000024010/1-499 Len: 531 Check: 2145 Weight: 1.00 Name: bmy_01816T0/1-431 Len: 531 Check: 2234 Weight: 1.00 Name: BACU017574/1-492 Len: 531 Check: 1425 Weight: 1.00 Name: ENSTTRP00000012962/1-458 Len: 531 Check: 957 Weight: 1.00 // 1 50 ENSP00000364133/1-503 MEAAVAAPRP RLLLLVLAAA AAAAAALLPG ATALQCFCHL CTKDNFTCVT ENSBTAP00000024010/1-499 MEAAAATPRP RLFLLML--- -AAAATLVPE ATPLQCFCHL CTKDNFTCVT bmy_01816T0/1-431 MEAAAAAPRP RLLLLVL--- -AAAATLVPE VTG------- ---------- BACU017574/1-492 ---------- ---------- ------FPP- --ALQCFCHL CTKDNFTCVT ENSTTRP00000012962/1-458 HEAAAAAPRP RLLLLVL--- -AAAATLVPE VTALQCFCHL CTKDNFTCVT 51 100 ENSP00000364133/1-503 DGLCFVSVTE TTDKVIHNSM CIAEIDLIPR DRPFVCAPSS KTGSVTTTYC ENSBTAP00000024010/1-499 DGLCFVSVTE TTDKVIHNSM CIAEIDLIPR DRPFVCAPSS KTGSITTTYC bmy_01816T0/1-431 ---------- ---------- ---------- ---------- ---------- BACU017574/1-492 DGLCFVSVTE TTDKVIHNSM CIAEIDLIPR DRPFVCAPSS KTGSVTTTYC ENSTTRP00000012962/1-458 DGLCFVSVTE TTDKVIHNSM CIAETDLIPR DRPFVCAPSS KTGSVTTTYC 101 150 ENSP00000364133/1-503 CNQDHCNKIE LPTTVKSSPG LGPVELAAVI AGPVCFVCIS LMLMVYICHN ENSBTAP00000024010/1-499 CNQDHCNKIE LPTVGKPSSG LGPVELAAVI AGPVCFVCIS LMLMVYICHN bmy_01816T0/1-431 ---------- -PFPGKPSSG LGPVELAAVI AGPVCFVCIS LMLMVYICHN BACU017574/1-492 CNQDHCNKIE LPTVGKPSSG LGPVELAAVI AGPVCFVCIS LMLMVYICHN ENSTTRP00000012962/1-458 CNQDHCNKIE LPTVGKPSSG LGPVELAAVI AGPVCFVCIS LMLMVYICHN 151 200 ENSP00000364133/1-503 RTVIHHRVPN EEDPSLDRPF ISEGTTLKDL IYDMTTSGSG SGLPLLVQRT ENSBTAP00000024010/1-499 RTVIHHRVPN EEDPSLDRPF ISEGTTLKDL IYDMTTSGSG SGLPLLVQRT bmy_01816T0/1-431 RTVIHHRVPN EEDPSLDRPF ISEGTTLKDL IYDMTTSGSG SGLPLLVQRT BACU017574/1-492 RTVIHHRVPN EEDPSLDRPF ISEGTTLKDL IYDMTTSGSG SGLPLLVQRT ENSTTRP00000012962/1-458 RTVIHHRVPN EEDPSLDRPF ISEGTTLKDL IYDMTTSGSG SGLPLLVQRT 201 250 ENSP00000364133/1-503 IARTIVLQES IGKGRFGEVW RGKWRGEEVA VKIFSSREER SWFREAEIYQ ENSBTAP00000024010/1-499 IARTIVLQES IGKGRFGEVW RGKWRGEEVA VKIFSSREER SWFREAEIYQ bmy_01816T0/1-431 IARTIVLQES IGKGRFGEVW RGKWRGEEVA VKIFSSREER SWFREAEIYQ BACU017574/1-492 IARTIVLQES IGKGRFGEVW RGKWRGEEVA VKIFSSREER SWFREAEIYQ ENSTTRP00000012962/1-458 IARTIVLQES IGKGRFGEVW RGKWRGEEVA VKIFSSREER SWFREAEIYQ 251 300 ENSP00000364133/1-503 TVMLRHENIL GFIAADNKDN GTWTQLWLVS DYHEHGSLFD YLNRYTVTVE ENSBTAP00000024010/1-499 TVMLRHENIL GFIAADNKDN GTWTQLWLVS DYHEHGSLFD YLNRYTVTVE bmy_01816T0/1-431 TVMLRHENIL GFIAADNKDN GTWTQLWLVS DYHEHGSLFD YLNRYTVTVE BACU017574/1-492 TVMLRHENIL GFIAADNKDN GTWTQLWLVS DYHEHGSLFD YLNRYTVTVE ENSTTRP00000012962/1-458 TVMLRHENIL GFIAADNKDN GTWTQLWLVS DYHEHGSLFD YLNRYTVTVE 301 350 ENSP00000364133/1-503 GMIKLALSTA SGLAHLHMEI VGTQ------ ----GKPAIA HRDLKSKNIL ENSBTAP00000024010/1-499 GMIKLALSTA SGLAHLHMEI VGTQ------ ----GKPAIA HRDLKSKNIL bmy_01816T0/1-431 GMIKLALSTA SGLAHLHMEI VGTQATMFNF LLSLGKPAIA HRDLKSKNIL BACU017574/1-492 GMIKLALSTA SGLAHLHMEI VGTQ------ ----GKPAIA HRDLKSKNIL ENSTTRP00000012962/1-458 GMIKLALSTA SGLAHLHMEI VGTQ------ ----GKPAIA HRDLKSKNIL 351 400 ENSP00000364133/1-503 VKKNGTCCIA DLGLAVRHDS ATDTIDIAPN HRVGTKRYMA PEVLDDSINM ENSBTAP00000024010/1-499 VKKNGTCCIA DLGLAVRHDS ATDTIDIAPN HRVGTKRYMA PEVLDDSINM bmy_01816T0/1-431 VKKNGTCCIA DLGLAVRHDS ATDTIDIAPN HRVGTKRYMA PEVLDDSINM BACU017574/1-492 VKKNGTCCIA DLGLAVRHDS ATDTIDIAPN HRVGTKRYMA PEVLDDSINM ENSTTRP00000012962/1-458 VKKNGTCCIA DLGLAVRHDS ATDTIDIAPN HRVGTKRYMA PEVLDDSINM 401 450 ENSP00000364133/1-503 KHFESFKRAD IYAMGLVFWE IARRCSIGGI HEDYQLPYYD LVPSDPSVEE ENSBTAP00000024010/1-499 KHFESFKRAD IYAMGLVFWE VARRCSIGGI HEDYQLPYYD LVPSDPSVEE bmy_01816T0/1-431 KHFESFKRAD IYAMGLVFWE IARRCSIGGI HEDYQLPYYD LVPSDPSVEE BACU017574/1-492 KHFESFKRAD IYAMGLVFWE IARRCSIGGI HEDYQLPYYD LVPSDPSVEE ENSTTRP00000012962/1-458 KHFESFKRAD IYAMGLVFWE IARRCSIGGI HEDYQLPYYD LVPSDPSVEE 451 500 ENSP00000364133/1-503 MRKVVCEQKL RPNIPNRWQS CEALRVMAKI MRECWYANGA ARLTALRIKK ENSBTAP00000024010/1-499 MRKVVCEQKL RPNIPNRWQS CEALRVMAKI MRECWYANGA ARLTALRIKK bmy_01816T0/1-431 MRKVVCEQKL RPNIPNRWQS CEALRVMAKI MRECWYANGA ARLTALRIKK BACU017574/1-492 MRKVVCEQKL RPNIPNRWQS CEALRVMAKI MRECWYANGA ARLTALRIKK ENSTTRP00000012962/1-458 MRKVVCEQKL RPNIPNRWQS CE-------- ---------- ---------- 501 550 ENSP00000364133/1-503 TLSQLSQQEG IKM------- ---------- - ENSBTAP00000024010/1-499 TLSQLSQQEG IKM------- ---------- - bmy_01816T0/1-431 TLSQLSQQEG IKM------- ---------- - BACU017574/1-492 TLSQLSQQXX XXXXXXXXXM KASKCKFCGF A ENSTTRP00000012962/1-458 ---------- ---------- ---------- -