KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:21:58 2014 Check: 00 .. Name: ENSP00000357873/1-432 Len: 450 Check: 4951 Weight: 1.00 Name: ENSBTAP00000024017/1-432 Len: 450 Check: 4817 Weight: 1.00 Name: ENSTTRP00000015347/1-418 Len: 450 Check: 7836 Weight: 1.00 Name: bmy_14536T0/1-420 Len: 450 Check: 4724 Weight: 1.00 Name: BACU004724/1-450 Len: 450 Check: 2375 Weight: 1.00 // 1 50 ENSP00000357873/1-432 ---------- ------MEGL AVRLLRGSRL --LRRNFLTC LSSWKIPPHV ENSBTAP00000024017/1-432 ---------- ------MERA TVRLLRGGAL --LRRNFPSC LSSWKTPPHA ENSTTRP00000015347/1-418 ---------- ---------- ---------- --LRRNFPIC LSSWKNPPHV bmy_14536T0/1-420 ---------T DVPVLFFPFV CVFLIQWGLF LQLRRNFPIC LSSWKNPPHV BACU004724/1-450 MGYEVIPKET DVPVLFFPFV CVFLIQWGLF LQLRRNFPIC LSSWKYPPHV 51 100 ENSP00000357873/1-432 SKSSQSEALL NITNNGIHFA PLQTFTDEEM MIKSSVKKFA QEQIAPLVST ENSBTAP00000024017/1-432 LNSSQSEAQL KATSNGPPLA PLQTFTDEEM MIKSAVKKFA QEQVAPFVSK ENSTTRP00000015347/1-418 LKSSQSEAGL KTTNKAQPYA PLQTFTDEEM MIKSAVKKFA QEQIAPLVSK bmy_14536T0/1-420 LKSSQSEAGL KTTNKGLPYA PLQTFTDEEM MIKSTVKKFA QEQIAPLVSK BACU004724/1-450 LKSSQSEAGL KTTNKGLPYA PLQTFTDEEM MIKSTVKKFA QEQIAPLVSK 101 150 ENSP00000357873/1-432 MDENSKMEKS VIQGLFQQGL MGIEVDPEYG GTGASFLSTV LVIEELAKVD ENSBTAP00000024017/1-432 MDEDSKMEKS VIQGLFQQGL MGIEIDTKYG GTGASFFSSV LVIEELAKVD ENSTTRP00000015347/1-418 MDENSKMEKS VIRGLFQQGL MGVEIDTKYG GTGASFFSSI LVIEELAKVD bmy_14536T0/1-420 MDENSKMEKS VIRGLFQQGL MGIEIDTKYG GTGASFFSSI LVIEELAKVD BACU004724/1-450 MDENSKMEKS VIRGLFQQGL MGIEIDTKYG GTGASFFSSI LVIEELAKVD 151 200 ENSP00000357873/1-432 ASVAVFCEIQ NTLINTLIRK HGTEEQKATY LPQLTTEKVG SFCLSEAGAG ENSBTAP00000024017/1-432 ASVALVCDIQ NTLINRMIGK YGTEEQKATY LPKLATEKAS SICISETGAG ENSTTRP00000015347/1-418 ASVALVCDIQ NTIINRLIGK YGTEEQKAIY LPKLATEQMG SFCLSEAGAG bmy_14536T0/1-420 ASVALVCDIQ NTVINRLIGK YGTEEQKAIY LPKLATEQMG SFCLSEAGAG BACU004724/1-450 ASVALVCDIQ NTVINRLIGK YGTEEQKAIY LPKLATEQMG SFCLSETGAG 201 250 ENSP00000357873/1-432 SDSFALKTRA DKEGDYYVLN GSKMWISSAE HAGLFLVMAN VDPTIGYKGI ENSBTAP00000024017/1-432 SDSFAMKTRA DKKGDYYIIN GSKMWISSAE IAGLFVVMAN ADFSAGYKGI ENSTTRP00000015347/1-418 SDSFALKTKA DKKGNYYVIN GSKMWISNAK DAGLFVVMAN VDLTLGYKGI bmy_14536T0/1-420 SDSFALKTKA DKKGNYYVIN GSKMWISNAK DAGLFVVMAN VDLTLGYKGI BACU004724/1-450 SDSFALKTKA DKKGNYYVIN GSKMWISNAK DAGLFVVMAN VDLTLGYKGI 251 300 ENSP00000357873/1-432 TSFLVDRDTP GLHIGKPENK LGLRASSTCP LTFENVKVPE ANILGQIGHG ENSBTAP00000024017/1-432 TCFLVDGDTE GLHVGKPENK LGIRASSTCP VTFENVKVPK TNILGQVGHG ENSTTRP00000015347/1-418 TCFLVDRDTE GLHIGKPENK MGIRASSTCP LTFENVKXXX XXXXXXXXXX bmy_14536T0/1-420 TCFLVDRDTE GLHIGKAENK MGIRASSTCP LTFENVKVPE ANILGQIGHG BACU004724/1-450 TCFLVDRDTE GLHIGKPENK MGIRASSTCP LTFENVKVPE ANILGQIGHG 301 350 ENSP00000357873/1-432 YKYAIGSLNE GRIGIAAQML GLAQGCFDYT IPYIKERIQF GKRLFDFQGL ENSBTAP00000024017/1-432 YKYAIGSLNE GRIGIAAQML GVAQGCFDYT IPYIKERKQF GRRVFDFQGL ENSTTRP00000015347/1-418 XXXXXXXXXX XXXXXXXXML GLAQGCFDHT IPYIKEREQF GKRIFDFQGL bmy_14536T0/1-420 YKYAIGGLNE SRIGIAAQML GLAQGCFDYT IPYIKEREQF GKRIFDFQGL BACU004724/1-450 YKYAIGGLNE SRIGIAAQML GLAQGCFDYT IPYIKEREQF GKRIFDFQGL 351 400 ENSP00000357873/1-432 QHQVAHVATQ LEAARLLTYN AARLLEAGKP FIKEASMAKY YASEIAGQTT ENSBTAP00000024017/1-432 QHQVAHMATQ LEAARLLTYN AARLLEAGRP MIKEASMAKY HASELAGLIT ENSTTRP00000015347/1-418 QHQVAHMATQ LEAARLLTYN AARLLEAGRP FIKESSMAKY YASEIAGLIT bmy_14536T0/1-420 QHQVAHVATQ LEAARLLTYN AARLLEAGRP FIKESSMAKY YASEIAGRIT BACU004724/1-450 QHQVAHMATQ LEAARLLTYN AARLLEAGRP FIKESSMAKY YASEIAGRIT 401 450 ENSP00000357873/1-432 SKCIEWMGGV GYTKDYPVEK YFRDAKIGTI YEGASNIQLN TIAKHIDAEY ENSBTAP00000024017/1-432 SKCIEWMGGV GYTKSYPVEK YFRDAKIGTI YEGTSNIQLN TIAKCISAEY ENSTTRP00000015347/1-418 GNCIDWMGGV GYTKNYPVEK YFRDAKIGTI YEGTSNMQLN TIAKRIDSEY bmy_14536T0/1-420 GKCIEWMGGV GYTKNYPVEK YFRDAKIGK- ---------- ---------- BACU004724/1-450 GKCIEWMGGV GYTKNYPVEK YFRDAKIGTI YEGTSNIQLN TIAKRIDSEY