KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:22:01 2014 Check: 00 .. Name: BACU006490/1-654 Len: 656 Check: 2556 Weight: 1.00 Name: ENSTTRP00000012136/1-462 Len: 656 Check: 4140 Weight: 1.00 Name: ENSP00000250896/1-465 Len: 656 Check: 2438 Weight: 1.00 Name: bmy_15780T0/1-511 Len: 656 Check: 8016 Weight: 1.00 Name: ENSBTAP00000024029/1-464 Len: 656 Check: 915 Weight: 1.00 // 1 50 BACU006490/1-654 MSNPFLKQVF NKDKTFRPKR KFEPGTQRFE LHKKAQASLN AGLDLKLAVQ ENSTTRP00000012136/1-462 ---------- ---------- ---------- ---------- ---------- ENSP00000250896/1-465 ---------- ---------- ---------- ---------- ---------- bmy_15780T0/1-511 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000024029/1-464 ---------- ---------- ---------- ---------- ---------- 51 100 BACU006490/1-654 LPAGEELNDW VAVHVVDFFN RVNLIYGTIS DGCTERSCPV MSGGPKYEYR ENSTTRP00000012136/1-462 ---------- ---------- ---------- ---------- ---------- ENSP00000250896/1-465 ---------- ---------- ---------- ---------- ---------- bmy_15780T0/1-511 ---------- ---------- ------GSGL RVSGGGTAAP AGARPRVPSP ENSBTAP00000024029/1-464 ---------- ---------- ---------- ---------- ---------- 101 150 BACU006490/1-654 WQDEHRFRRP TALSAPRYMD LLMDWIEVQI NNEDVFPTNV GTPFPKNFLQ ENSTTRP00000012136/1-462 ---------- ---------- ----MVQKKT AELQGF---- ---------- ENSP00000250896/1-465 ---------- ---------- ----MVQKKP AELQGF---- ---------- bmy_15780T0/1-511 AAPPPTGRPP GPASPPPLAG PGQKMVQKKT AELQGF---- ---------- ENSBTAP00000024029/1-464 ---------- ---------- ----MVQKKT AELQGF---- ---------- 151 200 BACU006490/1-654 VVKKILSRLF RVFVHVYIHH FDRIAQLGSE AHVNTCYKHF YYFVTEFGLI ENSTTRP00000012136/1-462 ------HRSF K--------- ---------- ---------- ---------- ENSP00000250896/1-465 ------HRSF K--------- ---------- ---------- ---------- bmy_15780T0/1-511 ------HRSF K--------- ---------- ---------- ---------- ENSBTAP00000024029/1-464 ------HRSF K--------- ---------- ---------- ---------- 201 250 BACU006490/1-654 DTKELEPLGQ NPFELAFSLD QAHHGEPDFG LECPARPDMP ASQPIDIPDA ENSTTRP00000012136/1-462 --------GQ NPFELAFSLD QAHHGEPDFV LECPARPDMP ASQPIDIPDA ENSP00000250896/1-465 --------GQ NPFELAFSLD QPDHGDSDFG LQCSARPDMP ASQPIDIPDA bmy_15780T0/1-511 --------GQ NPFELAFSLD QAHHGEPDFG LECPARPDMP ASQPIDIPDA ENSBTAP00000024029/1-464 --------GQ NPFELAFTLD QACHGEPDFS PECPTRPDMP TSQPIDIPDA 251 300 BACU006490/1-654 KKRGKKKKRC RATDSFSGRF EDVYQLQEDV LGEGAHARVQ TCVNLITNQE ENSTTRP00000012136/1-462 KKRSKKKKRC RATDSFSGRF EDVYQLQEDV LGEGAHARVQ TCVNLITSQE ENSP00000250896/1-465 KKRGKKKKRG RATDSFSGRF EDVYQLQEDV LGEGAHARVQ TCINLITSQE bmy_15780T0/1-511 KKRGKKKKRC RATDSFSGRF EDVYQLQEDV LGEGAHARVQ TCVNLITNQE ENSBTAP00000024029/1-464 KKRGKKKKRC RATDSFSGKF EDVYQLQEDV LGEGAHARVQ TCINLITNQE 301 350 BACU006490/1-654 YAVKIIEKQP GHIRSRVFRE VEMLYQCQGH RNVLELIEFF EEDDRFYLVF ENSTTRP00000012136/1-462 YAVKIIEKQP GHIRSKVFR- VEMLYQCQEH WNVLELIEFF EEDDRFYLVF ENSP00000250896/1-465 YAVKIIEKQP GHIRSRVFRE VEMLYQCQGH RNVLELIEFF EEEDRFYLVF bmy_15780T0/1-511 YAVKIIEKQP GHIRSRVFRE VEMLYQCQGH RNVLELIEFF EEDDRFYLVF ENSBTAP00000024029/1-464 YAVKIIEKQP GHIRSRVFRE VEMLYQCQGH RNVLELIEFF EEEDRFYLVF 351 400 BACU006490/1-654 EKMRGGSILS HIHKRRHFNE LEASVVVQDV ATSLDFLHNK GIAHRDLKPE ENSTTRP00000012136/1-462 EKMRGGSILS HIHKRRHFNE LEASVVVQDV ASALDFLHNK GIAHRDLKPE ENSP00000250896/1-465 EKMRGGSILS HIHKRRHFNE LEASVVVQDV ASALDFLHNK GIAHRDLKPE bmy_15780T0/1-511 EKMRGGSILS HIHKRRHFNE LEASVVVQDV ASALDFLHNK GIAHRDLKPE ENSBTAP00000024029/1-464 EKMRGGSILS HIHKRRHFNE LEASVVVQDV ASALDFLHNK GIAHRDLKPE 401 450 BACU006490/1-654 NILCEHPNQV SPVKICDFDL GSGIKLNGDC SPISTPELLT PCGSAEYLAL ENSTTRP00000012136/1-462 NILCEHPNQV SPVKICDFDL GSGIKLNGDC SPISTPELLT PCGSAEYMAP ENSP00000250896/1-465 NILCEHPNQV SPVKICDFDL GSGIKLNGDC SPISTPELLT PCGSAEYMAP bmy_15780T0/1-511 NILCEHPNQV SPVKICDFDL GSGIKLNGDC SPISTPELLT PCGSAEYMAP ENSBTAP00000024029/1-464 NILCEHPNQV SPVKICDFDL GSGIKLNGDC SPISTPELLT PCGSAEYMAP 451 500 BACU006490/1-654 EVVEAFSEEA SIYDKRCDLW SLGVILYILL SGYPPFVGHC GSDCGWDRGE ENSTTRP00000012136/1-462 EVVEAFSEEA SIYDKRCDLW SLGVILYILL SGYPPFVGHC GSDCGWDRGE ENSP00000250896/1-465 EVVEAFSEEA SIYDKRCDLW SLGVILYILL SGYPPFVGRC GSDCGWDRGE bmy_15780T0/1-511 EVVEAFSEEA SIYDKRCDLW SLGVILYILL SGYPPFVGHC GSDCGWDRGE ENSBTAP00000024029/1-464 EVVEAFSEEA SIYDKRCDLW SLGVILYILL SGYPPFVGHC GSDCGWDRGE 501 550 BACU006490/1-654 ACPACQNMLF ESIQEGKYEF PEKDWAHISF AAKDLISKLL VRDAKQRLSA ENSTTRP00000012136/1-462 ACPACQNMLF ESIQEGKYEF PEKDWAHISF AAKDLISKLL VRDAKQRLSA ENSP00000250896/1-465 ACPACQNMLF ESIQEGKYEF PDKDWAHISC AAKDLISKLL VRDAKQRLSA bmy_15780T0/1-511 ACPACQNMLF ESIQEGKYEF PEKDWAHISF AAKDLISKLL VRDAKQRLSA ENSBTAP00000024029/1-464 ACPACQNMLF ESIQEGKYEF PEKDWAHISF AAKDLISKLL VRDAKQRLSA 551 600 BACU006490/1-654 AQVLQHPWVQ GCAPENTLPT PMVLQRNSCA KDLTSFAAEA IAMNRQLAQR ENSTTRP00000012136/1-462 AQVLQHPWVQ GXXXXXXXXX XXXXXXNSCA KDLTSFAAEA IAMNRQLAQR ENSP00000250896/1-465 AQVLQHPWVQ GCAPENTLPT PMVLQRNSCA KDLTSFAAEA IAMNRQLAQH bmy_15780T0/1-511 AQVLQHPWVQ GCAPENTLPT PMVLQRNSCA KDLTSFAAEA IAMNRQLAQR ENSBTAP00000024029/1-464 AQVLQHPWVQ GCAPENTLPT PMVLQRNSCA KDLTSFAAEA IAMNRQLAQR 601 650 BACU006490/1-654 EEDAAEE--A GQDQPVVIRA TSRCLQLSPP SQSKLAQGRQ RASLSAAPVV ENSTTRP00000012136/1-462 EEDAAEE--A GQEQPVVIRA TSRCLQLSPP SQSKLAQRRQ RASLSAAPVV ENSP00000250896/1-465 DEDLAEEEAA GQGQPVLVRA TSRCLQLSPP SQSKLAQRRQ RASLSSAPVV bmy_15780T0/1-511 EEDAAEE--A GQDQPVVIRA TSRCLQLSPP SQSKLAQRRQ RASLSAAPVV ENSBTAP00000024029/1-464 EEDAAEEE-A EQGQPVVIRA TSRCLQLSPP SQSKLAQRRQ RASLSAAPVV 651 700 BACU006490/1-654 LVGDHA ENSTTRP00000012136/1-462 LVGDHA ENSP00000250896/1-465 LVGDHA bmy_15780T0/1-511 LVGDHA ENSBTAP00000024029/1-464 LVGDHA