KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:22:05 2014 Check: 00 .. Name: ENSBTAP00000024049/1-517 Len: 522 Check: 1888 Weight: 1.00 Name: ENSP00000416799/1-520 Len: 522 Check: 8167 Weight: 1.00 Name: ENSTTRP00000001900/1-520 Len: 522 Check: 3863 Weight: 1.00 Name: bmy_02936T0/1-520 Len: 522 Check: 4482 Weight: 1.00 Name: BACU011335/1-520 Len: 522 Check: 3517 Weight: 1.00 // 1 50 ENSBTAP00000024049/1-517 MGKPSSMDAK YKDDLFRKYV QFHESQGDAT PS-----SDE SLRAAASTLL ENSP00000416799/1-520 MGKPSSMDTK FKDDLFRKYV QFHESKVDTT TSRQRPGSDE CLRVAASTLL ENSTTRP00000001900/1-520 MGKPSSMDAK YKDDLFRKYV QFHEGKVDTT PSKQRPGSDE SLRVAASTLL bmy_02936T0/1-520 MGKPSSMDAK YKDDLFRKYV QFHEGKVDTT PSKQRPGSDE SLRVAASTLL BACU011335/1-520 MGKPSSMDAK YKDDLFRKYV QFHEGKVDTT PSKQRPGSDE SLRVAASTLL 51 100 ENSBTAP00000024049/1-517 SLHKVDPCYR FRLIQFYEVV ESSLRSLRSS SLRALRCAFS VLETMGINLF ENSP00000416799/1-520 SLHKVDPFYR FRLIQFYEVV ESSLRSLSSS SLRALHGAFS MLETVGINLF ENSTTRP00000001900/1-520 SLHKVDPFYR FRLIQFYEVV ESSLRSLSSS SLRALHCAFS VLETVGVNLF bmy_02936T0/1-520 SLHKVDPFYR FRLIQFYEVV ESSLRSLSSS SLRALHCAFS VLETVGVNLF BACU011335/1-520 SLHKVDPFYR FRLIQFYEVV ESSLRSLSSS SLRALHCAFS VLETVGVNLF 101 150 ENSBTAP00000024049/1-517 LCPWKKEFRS IKTYTGPFVY YVKSTLLEED IRAILSYMGY MPELGTAYRL ENSP00000416799/1-520 LYPWKKEFRS IKTYTGPFVY YVKSTLLEED IRAILSCMGY TPELGTAYKL ENSTTRP00000001900/1-520 LYPWKKEFRS IKTYTGPFVY YVKSTLLEED IRAILNYMGY VPELGTAYKL bmy_02936T0/1-520 LYPWKKEFRS IKTYTGPFVY YVKSTLLEED IRAILNYMGY VPELGTAYKL BACU011335/1-520 LYPWKKEFRS IKTYTGPFVY YVKSTLLEED IRAILNYMGY VPELGTAYKL 151 200 ENSBTAP00000024049/1-517 KELVETLQVK MVSFELFLAK VECEQMLEIH SQVKDKGYTE LDVVSERRGS ENSP00000416799/1-520 RELVETLQVK MVSFELFLAK VECEQMLEIH SQVKDKGYSE LDIVSERKSS ENSTTRP00000001900/1-520 KELVETLQVK MVSFELFLAK VECEQMLEIH SQVKDKGYSE LDVVSERKSS bmy_02936T0/1-520 KELVETLQVK MVSFELFLAK VECEQMLEIH SQVKDKGYSE LDVVSERRSS BACU011335/1-520 KELVETLQVK MVSFELFLAK VECEQMLEIH SQVKDKGYSE LDVVSERRSS 201 250 ENSBTAP00000024049/1-517 VEDARGCAEA LRRRAEAREP LSASMARVVL QKSASERAAK DYYKPRVTKP ENSP00000416799/1-520 AEDVRGCSDA LRRRAEGREH LTASMSRVAL QKSASERAAK DYYKPRVTKP ENSTTRP00000001900/1-520 AEDVRGCSDA LRRRAEGREH LTTSMARVVL QKSASERAAK DYYKPRVTKP bmy_02936T0/1-520 VEDVRGCSDA LRRRAEGREH LTTSMARVVL QKSASERAAK DYYKPRVTKP BACU011335/1-520 AEDVRGCSDA LRRRAEGREH LTTSMARVVL QKSASERAAK DYYKPRVTKP 251 300 ENSBTAP00000024049/1-517 SRSVDTYDSY WESRKPPLKT SLSLRKEPAA AEPGDELKDE IIRPPPSLLT ENSP00000416799/1-520 SRSVDAYDSY WESRKPPLKA SLSLRKEPVA TDVGDDLKDE IIRPSPSLLT ENSTTRP00000001900/1-520 SRSVDTYDNY WESRKPPLKT SLSLRKEPVA ADLGDDLKDE IIRPSPSLLT bmy_02936T0/1-520 SRSVDTYDNY WESRKPPLKA SLSLRKEPVA ADLGDDLKDE IIRPSPSLLA BACU011335/1-520 SRSVDTYDNY WESRKPPLKA SLSLRKEPVA ADLGDDLKDE IIRPSPSLLA 301 350 ENSBTAP00000024049/1-517 VAGSPHGGAD DLPAPAPSNG LGLLRGPYLP GSDDVDLYTD AEPRAAYRRQ ENSP00000416799/1-520 MASSPHGSPD VLPPASPSNG PALLRGTYFS TQDDVDLYTD SEPRATYRRQ ENSTTRP00000001900/1-520 MSSSPHGSPD DLPSPSPNNG LGLLRGTYFS AQEDVDLYTD SEPRATYRRQ bmy_02936T0/1-520 MSSSPHGSPD DLPSPSPNNG LGLLRGTYFS TQEDVDLYTD SEPRATYRRQ BACU011335/1-520 MSSSPHGSPD DLPSPSPNNG LGLLRGTYFS TQEDVDLYTD SEPRATYRRQ 351 400 ENSBTAP00000024049/1-517 DALRPDVWLL RNDAHPGYHK RSTPAKESAL SKCQNCGLSC SAALCQRCDS ENSP00000416799/1-520 DALRPDVWLL RNDAHSLYHK RSPPAKESAL SKCQSCGLSC SSSLCQRCDS ENSTTRP00000001900/1-520 DALRPDVWLV RNDAHPIYHK RSPPAKESAL SKCQNCGLSC SSSLCQRCDS bmy_02936T0/1-520 DALRPDVWLV RSDAHPIYHK RSPPAKESAL SKCQNCGLSC SSSLCQRCDS BACU011335/1-520 DALRPDIWLV RSDAHPIYHK PPPPAKESAL SKCQNCGLSC SSSLCQRCDS 401 450 ENSBTAP00000024049/1-517 LLACSPAAKP SAFPGKASGH DSLAHGAALR EKYAGQTQGL ERPPHLHSKS ENSP00000416799/1-520 LLTCPPASKP SAFPSKASTH DSLAHGASLR EKYPGQTQGL DRLPHLHSKS ENSTTRP00000001900/1-520 LLACSPASKP GGFPSKASAH DSLAHGSSLR EKYAGQTQGL DRPPHLHSKS bmy_02936T0/1-520 LLACSPASKP GGFPSKASAH DSLAHGSSLR EKYAGQVQGL DRPPHLHSKS BACU011335/1-520 LLVCSPASKP GGFPSKASAH DSLAHGSSLR EKYAGQTQGL DRPPHLHSKS 451 500 ENSBTAP00000024049/1-517 KPPSAVAATS RCGFCNRPGA ANTCTQCSKV SCDACLSAYH YDPCCKKSEL ENSP00000416799/1-520 KPST--TPTS RCGFCNRPGA TNTCTQCSKV SCDACLSAYH YDPCYKKSEL ENSTTRP00000001900/1-520 KPSS--AAAT RCGFCDRPGA ANTCTQCSKA SCDACLSTYH YDPCCKKSEL bmy_02936T0/1-520 KPSP--AAAS RCGFCDRPGA ANTCTQCSKA SCDACLSTYH YDPCCKKSEL BACU011335/1-520 KPSP--AAAS RCGFCDRPGA ANTCTQCSKA SCDACLSTYH YDPCCKKSEL 501 550 ENSBTAP00000024049/1-517 HKFMPNNQLN YKSTQFSHLV YR ENSP00000416799/1-520 HKFMPNNQLN YKSTQLSHLV YR ENSTTRP00000001900/1-520 HKFMPNNQLN YKSAQFSHLV YR bmy_02936T0/1-520 HKFMPNNQLN YKSAQFSHLV YR BACU011335/1-520 HKFMPNNQLN YKSAQFSHLV YR