KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:22:06 2014 Check: 00 .. Name: ENSP00000362576/1-528 Len: 540 Check: 919 Weight: 1.00 Name: ENSBTAP00000024051/1-528 Len: 540 Check: 3716 Weight: 1.00 Name: bmy_11818T0/1-526 Len: 540 Check: 458 Weight: 1.00 Name: BACU009631/1-454 Len: 540 Check: 1571 Weight: 1.00 Name: ENSTTRP00000014206/1-528 Len: 540 Check: 1787 Weight: 1.00 // 1 50 ENSP00000362576/1-528 MGDAPSPEEK LHLITRNLQE VLGEEKLKEI LKERELKIYW GTATTGKPHV ENSBTAP00000024051/1-528 MGDSLSPEEK LSLITRNLQE VLGEEKLKEI LKERELKVYW GTATTGKPHV bmy_11818T0/1-526 MGDALSPEEK LHLITRNLQE VLGEEKVKEI LKERELKVYW GTATTGKPHV BACU009631/1-454 MGDALSPEEK LHLITRNLQE VLGEEKVKEI LKERELKVYW GTATTGKPHV ENSTTRP00000014206/1-528 MGDALSPEEK LHLITRNLQE VLGEEKVKEI LKERELKVYW GTATTGKPHV 51 100 ENSP00000362576/1-528 AYFVPMSKIA DFLKAGCEVT ILFADLHAYL DNMKAPWELL ELRVSYYENV ENSBTAP00000024051/1-528 AYFVPMSKIA DFLKAGCEVT ILFADLHAYL DNMKAPWELL ELRTSYYENV bmy_11818T0/1-526 AYFVPMSKIA DFLKAGCEVT ILFADLHAYL DNMKAPWELL ELRTSYYENV BACU009631/1-454 AYFVPMSKIA DFLKAGCEVT ILFADLHAYL DNMKAPWELL ELRTSYYENV ENSTTRP00000014206/1-528 AYFVPMSKIA DFLKAGCEVT ILFADLHAYL DNMKAPWELL ELRTSYYENV 101 150 ENSP00000362576/1-528 IKAMLESIGV PLEKLKFIKG TDYQLS---- ----KEYTLD VYRLSSVVTQ ENSBTAP00000024051/1-528 IKAMLESIGV PLEKLRFIKG TDYQLS---- ----KEYTLD VYRLSSVVTQ bmy_11818T0/1-526 IKAMLESIGV PLEKLKFIKG TDYQLSNCPL LSLLREYTLD VYRLSSVVTQ BACU009631/1-454 IKAMLESIGV PLEKLKFIKG TDYQLS---- ----KEYTLD VYRLSSVVTQ ENSTTRP00000014206/1-528 IKAMLESIGV PLEKLRFIKG TDYQLS---- ----KEYTLH VYRLSSVVTQ 151 200 ENSP00000362576/1-528 HDSKKAGAEV VKQVEHPLLS GLLYPGLQAL DEEYLKVDAQ FGGIDQRKIF ENSBTAP00000024051/1-528 HDAKKAGAEV VKQVEHPLLS GLLYPGLQAL DEEYLKVDAQ FGGVDQRKIF bmy_11818T0/1-526 HDAKKAGAEV VKQVEHPLLS GLLYPGLQAL DEEYLKVDAQ FGGVDQRKIF BACU009631/1-454 HDAKKAGAEV VKQVEHPLLS GLLYPGLQAL DEEYLKVDAQ FGGVDQRKIF ENSTTRP00000014206/1-528 HDAKKARAEV VKQVEHPLLS GLLYPGLLAL DEEYLKVDAQ FGGVDQRKIF 201 250 ENSP00000362576/1-528 TFAEKYLPAL GYSKRVHLMN PMVPGLTGSK MSSSEEESKI DLLDRKEDVK ENSBTAP00000024051/1-528 TFAEKYLPAL GYSKRIHLMN PMVPGLTGSK MSSSEEESKI DLLDRKEDVK bmy_11818T0/1-526 TFAEKYLPAL GYSKRVHLMN PMVPGLTGSK MSSSEEESKI DLLDRKEDVK BACU009631/1-454 TFAEKYLPAL GYSKRVHLMN PMVPGLTGSK MSSSEEESKI DLLDRKEDVK ENSTTRP00000014206/1-528 TFAEKYLPAL GYSKRVHLMN PMVPGLTGSK MSSSEEESKI DLLDRKEDVK 251 300 ENSP00000362576/1-528 KKLKKAFCEP GNVENNGVLS FIKHVLFPLK SEFVILRDEK WGGNKTYTAY ENSBTAP00000024051/1-528 KKLKKAFCEP GNVENNGVLA FIRHVLFPLK SEFVILRDEK WGGNKTYTAY bmy_11818T0/1-526 KKLKKAFCEP GNVENNGVLS FIKHVLFPLK SEFVILRDEK WGGNKTYTAY BACU009631/1-454 KKLKKAFCEP GNVENNGVLS FIKHVLFPLK SE-------- ---------- ENSTTRP00000014206/1-528 KKLKKAFCEP GNVDNNGVLS FIKHVLFPLK SEFVILRDEK WGGNKTYTAY 301 350 ENSP00000362576/1-528 VDLEKDFAAE VVHPGDLKNS VEVALNKLLD PIREKFNTPA LKKLASAAYP ENSBTAP00000024051/1-528 LDLEKDFADE VVHPGDLKNS VEVALNKLLD PIREKFNTPA LKKLSSAAYP bmy_11818T0/1-526 LDLEKDFADE VVHPGDLKNS VEVALNKLLD PIREKFNTPA LKKLSSAAYP BACU009631/1-454 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014206/1-528 LDLEKDFADE VVHPGDLKNS VEVALNKLLD PIREKFNTPA LKKLSSAAYP 351 400 ENSP00000362576/1-528 DPSKQK---- PMAKGPAKNS EPEEVIPSRL DIRVGKIITV EKHPDADSLY ENSBTAP00000024051/1-528 DPSKQK---- PAVKGPAKNS EPEEVIPSRL DIRVGKVISV DKHPDADSLY bmy_11818T0/1-526 DPSKQKGXPG PMIYSIMMLS EPD------- -------ISC WQHPDADSLY BACU009631/1-454 ---------- PVAKGPAKNS EPEEVIPSRL DIRVGRVISV DKHPDADSLY ENSTTRP00000014206/1-528 DPSKQK---- PVAKGPAKNS EPEEVIPSRL DIRVGRVISV DKHPDADSLY 401 450 ENSP00000362576/1-528 VEKIDVGEAE PRTVVSGLVQ FVPKEELQDR LVVVLCNLKP QKMRGVESQG ENSBTAP00000024051/1-528 VEKIDVGEAE PRTVVSGLVQ FVPKEELQDR LVVVLCNLKP QKMRGVESQG bmy_11818T0/1-526 VEKIDVGEAE PRTVVSGLVQ FAPREELQDR LVVVLCNLKP QKMRGIESQG BACU009631/1-454 VEKIDVGEAE PRTVVSGLVQ FAPREELQDR LVVVLCNLKP QKMRGIESQG ENSTTRP00000014206/1-528 VEKIDVGEAE PRTVVSGLVQ FAPREELQDR LVVVLCNLKP QKMRGIESKG 451 500 ENSP00000362576/1-528 MLLCASIEGI NRQVEPLDPP AGSAPGEHVF VKGYEKGQPD EELKPKKKVF ENSBTAP00000024051/1-528 MLLCASVEGV NRKVEPLDPP AGSAPGERVF VKGYEKGQPD EELKPKKKVF bmy_11818T0/1-526 MLLCASVEGA SRKVEPLDPP AGSAPGERVF VKGYEKGQPD EELKPKKKVF BACU009631/1-454 MLLCASVEGA SRKVEPLDPP AGSAPGERVF VKGYEKGQPD EELKPKKKVF ENSTTRP00000014206/1-528 MLLCASIEGA SRKVEPLDPP AGSAPGERVF VKGYEKGQPD EELKPKKKVF 501 550 ENSP00000362576/1-528 EKLQADFKIS EECIAQWKQT NFMTKLGSIS CKSLKGGNIS ENSBTAP00000024051/1-528 EKLQADFKIS DEYIAQWKQT NFMTKLGSVS CKSLKGGNIS bmy_11818T0/1-526 EKLQADFKIS EECIAQWKQT NFMTKLGHIS CKSLKGGNIS BACU009631/1-454 EKLQADFKIS EECIAQWKQT NFMTKLGYIS CKSLKGGNIS ENSTTRP00000014206/1-528 EKLQADFKIS EECIAQWKQT NFMTKLGYIS CKSLKGGNIS