KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:22:06 2014 Check: 00 .. Name: ENSP00000362574/1-408 Len: 481 Check: 5090 Weight: 1.00 Name: ENSBTAP00000024053/1-422 Len: 481 Check: 2090 Weight: 1.00 Name: bmy_11817T0/1-366 Len: 481 Check: 3582 Weight: 1.00 Name: BACU009632/1-473 Len: 481 Check: 4091 Weight: 1.00 Name: ENSTTRP00000014212/1-413 Len: 481 Check: 9556 Weight: 1.00 // 1 50 ENSP00000362574/1-408 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000024053/1-422 ---------- ---------- ---------- ---------- ---------- bmy_11817T0/1-366 ---------- ---------- ---------- ---------- ---------- BACU009632/1-473 MPCRGCSASE GELGAAKPYP KKGELRSPFL LALEDWRRHR FLPGLEGGQL ENSTTRP00000014212/1-413 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000362574/1-408 ----MMCSRV PSEQSSGTSL LPKDGAPFSW DSLDEDGLDD SLLELSEGEE ENSBTAP00000024053/1-422 ----MMCSLV PSEQSSGTSL LPKDNAPFSW SSLDEDELDD SLLELSDG-E bmy_11817T0/1-366 ----MPCSLV PSEQSSGTSL LPKDNAPFSW DSLDEDGLDD SLLELSDG-E BACU009632/1-473 ALQDMPCSLV PSEQSSGTSL LPKDNAPFSW DSLDEDGLDD SLLELSDG-E ENSTTRP00000014212/1-413 ----MPCSLV PSEQSSGTSL LPKDNAPFSW DSLDEDGLDD SLLELSDG-E 101 150 ENSP00000362574/1-408 DDGDVNYTEE EIDALLKEDD PSYEQSS--- --GEDDGGHV EKGERGSQIL ENSBTAP00000024053/1-422 DDGHFSFTEE QIQELLKDDD LSNEHFPWGG GLPSDDSRNV EKGEKGSQIP bmy_11817T0/1-366 DDGHFSFTEE EIQELLKDDD LSNEHFSWGG GLPNDDSRNV EKGGKGSQIP BACU009632/1-473 DDGHFSFTEE EIQELLKDDD ISNEHFSWGG GLPNDDSRNV EKGEKGSQIP ENSTTRP00000014212/1-413 DDGHFSFTEE EIQELLKDDD LSNEHFSWGG GLPNHDSRNV EKGGKESQIP 151 200 ENSP00000362574/1-408 LDTPREKNSS YSLGPVAETP DLFKLPQLST SSGHGPAHTK PLNRRSVLEK ENSBTAP00000024053/1-422 LDTPQEKDSP YNMGPEAETP DTFKLPQLTT SVGHGPTPAK SLNRRFALEK bmy_11817T0/1-366 LDTPQEKNSL YSLGPEAETP SLFKLPQLNT SVGHGPTPTK PLNRRFALEK BACU009632/1-473 LDTPQEKNAL YSLGPEAETP SLFKLPQLNT SVGHGPTPTK PLNRRFALEK ENSTTRP00000014212/1-413 LDTPQEKNSL YSLGPEAETT SLFKLPQLNT SVGHGPTPPK PLNRRFALEK 201 250 ENSP00000362574/1-408 NLIKVTVAPF NPTVCDALLD KDET----DS SKDTEKLSSL GEEMREDGLS ENSBTAP00000024053/1-422 NLIKVTVAPF DPTVCDVALD KDKTYVSEVT SRVTEKPSSL GEEMREDDLS bmy_11817T0/1-366 NLIKVTVAPF DPTVCDVVLD KDKT----DT SKVTEKPSSL GEEMREDGLS BACU009632/1-473 NLIKVTVAPF DPTVCDVVLD KDKT----DT SEVTEKPSSL GEEMREDGLS ENSTTRP00000014212/1-413 NLIKVTVAPF DPTVCNVVLD KDKT----DT SKVTEKPSSL GEEMREDGLS 251 300 ENSP00000362574/1-408 PNESKLCTES EGISPNNSAW NGPQLSSSNN NFQQTVSDKN MPDSENPTSV ENSBTAP00000024053/1-422 PNESTLCTES EGISPDNSAS DGPPLPSSNS NFQHTVSDKN MSDSKKATPV bmy_11817T0/1-366 LNESTICTES EGISLSNSAY DGPPLPSSNS NFQQTVSDKN MSDSKKPTPV BACU009632/1-473 LNESIICTES EGISLSNSAY DEPPLPSSNS NFKQTVSDKD MSDSKKPTPV ENSTTRP00000014212/1-413 LNESTICTES EGISLSNSAY DGSPLPFSNS NFQQTVSDKN MSDSKKPTPV 301 350 ENSP00000362574/1-408 FSRISDHSET PNMELSCRNG GSHKSSCEMR SLVVSTSSNK QDVLNKDSGK ENSBTAP00000024053/1-422 FSQILDHSET PNTGSSRRN- GSYKSSFEMK LPVSSSSS-- KDVLDKDSGK bmy_11817T0/1-366 FSQILDHSET PNTGSSWRN- GSHKSSFEMR FPVVSSSSN- EDVLDEDSGK BACU009632/1-473 FSQILDHSET PNTGSSWRN- GSHKSSFEMR FPVVSSSSN- EDVLDKDSGK ENSTTRP00000014212/1-413 FSQILDHSET PNTGSAWRN- GSHKSSFEMR FPVVSSSSNK QDVLDKDSGK 351 400 ENSP00000362574/1-408 MKGHERRLGK VIPVLQTKTR TNVPTFSQSN LEQQKQLYLR SVIAHIEDPE ENSBTAP00000024053/1-422 LKVHEKRLGK VIPVLQAKTR TNVPTFSPSD LEKQKQSYLR NVIAHIEDPV bmy_11817T0/1-366 LKVHEKRLGK VIPVLQTKTR TNIPTFSPSD LEKQKQSYLR NVIAHIEDPV BACU009632/1-473 LKVHEKRLGK VIPVLQTKTR TNIPTFSPSD LEKQKQSYLR NVIAHIEDPV ENSTTRP00000014212/1-413 LKVHEKRLGK VIPVLQTKTR TNIPTFSPSD LEKQKQSYLR NVIAHIEDPV 401 450 ENSP00000362574/1-408 DTNQGISGEL CALMDQVHHM QHSKWQHPSD LTTRNYAR-R QKHLQRYSLT ENSBTAP00000024053/1-422 DSNQGTLGEL CALMDQVHHM HNQKWQHPSD LTRRNYARFR QKSLQRYSLT bmy_11817T0/1-366 DSNQGNT--- ---------- ---------- ---------- -------VIK BACU009632/1-473 DSNQGTLGEL CALMGQVHHM QNPKWQHPSD LTRRNYARFR QKSLQRYSLT ENSTTRP00000014212/1-413 DSNQGTLGEL CALMGQVHHM QNPKWQHPSD LTRRNYARFR QKSLQRYSLT 451 500 ENSP00000362574/1-408 QW-VDRNMRS HHRFQRLPDF SYS------- - ENSBTAP00000024053/1-422 QW-VDRNKRS HHRFQRLPDF PYGPFVSSHQ Q bmy_11817T0/1-366 EWRIKNVMRL FFQCNIA--- ---------- - BACU009632/1-473 QW-VDQNMRS HHRFQRLPDF PYSPFVSSHQ Q ENSTTRP00000014212/1-413 QW-VDQNMRS HHRFQRLPDF PYSP------ -