KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:22:07 2014 Check: 00 .. Name: ENSP00000378782/1-297 Len: 333 Check: 8431 Weight: 1.00 Name: ENSBTAP00000024072/1-299 Len: 333 Check: 1282 Weight: 1.00 Name: ENSTTRP00000005045/1-322 Len: 333 Check: 5720 Weight: 1.00 Name: bmy_00763T0/1-309 Len: 333 Check: 5900 Weight: 1.00 Name: BACU011923/1-299 Len: 333 Check: 519 Weight: 1.00 // 1 50 ENSP00000378782/1-297 ---------- ---------- ----MDAE-- --------GL ALLLPPVTLA ENSBTAP00000024072/1-299 ---------- ---------- ----MDPE-- --------GL AHLLPPATLA ENSTTRP00000005045/1-322 HPLPQSPASL TTELWAHQSQ LQAVMDPE-- --------GL ALLLPPATLA bmy_00763T0/1-309 ---------- ---------- ----RQPKCN TALFLSLPGL ALLLPPATLA BACU011923/1-299 ---------- ---------- ----MDPE-- --------GL ALLLPPATLA 51 100 ENSP00000378782/1-297 ALVDSWLRED CPGLNYAALV SGAGPSQAAL WAKSPGVLAG QPFFDAIFTQ ENSBTAP00000024072/1-299 ALADSWLRED CPGLNYVALV SGTAPSQAVL WAKSPGVLAG RPFFDAIFAQ ENSTTRP00000005045/1-322 ALAESWLRED CPGLNHMALV TGAASSQAVL WAKSPGVLAG RPFFDAIFAQ bmy_00763T0/1-309 ALAESWLQED CPGLNHMALV TGAAPSQAVL WAKSPGVLAG RPFFDAIFAQ BACU011923/1-299 TLAESWLRED CPGLNHMALV TGAAPSQAML WAKSPGVLAG RPFFDAIFAQ 101 150 ENSP00000378782/1-297 LNCQVSWFLP EGSKLVPVAR VAEVRGPAHC LLLGERVALN TLARCSGIAS ENSBTAP00000024072/1-299 VNCQVSWFLP EGSKLVPVAK VAEVRGPAHC LLLGERVALN TLARCSGVAS ENSTTRP00000005045/1-322 VNCQVSWFLP EGSKLVPVAK VAEVRGPVHY LLLGERVALN MLARCSGVAS bmy_00763T0/1-309 VNCQVSWFLP EGSKLVPVAK VAEVRGPAHC LLLGERVALN MLARCSGVAS BACU011923/1-299 VNCQVSWFLP EGSKLVPVAK VAEVRGPAHC LLLGERVALN MLARCSGVAS 151 200 ENSP00000378782/1-297 AAAAAVEAAR GAGWTGHVAG TRKTTPGFRL VEKYGLLVGG AASHRYDLGG ENSBTAP00000024072/1-299 MAAAAVETAR GTGWAGHVAG TRKTTPGFRL VEKYGLLVGG AAAHRYDLGG ENSTTRP00000005045/1-322 AAAAAVETAR GTGWAGHVAG TRKTTPGFRL VEKYGLLVGG AASHRYDLGG bmy_00763T0/1-309 AAAAAVXTAR GTGWAGHVAG TRKTTPGFRL VEKYGLLVGG AASHRYDLGG BACU011923/1-299 AAAAAVETAR GTGWAGHVAG TRKTTPGFRL VEKYGLLVGG AASHRYDLGG 201 250 ENSP00000378782/1-297 LVMVKDNHVV AAGGVEKAVR AARQAADFTL KVEVECSSLQ EAVQAAEAGA ENSBTAP00000024072/1-299 LVMVKDNHVM AAGGVKKAVR AARRAADFAL KVEVECSSLQ EAVEAAEAGA ENSTTRP00000005045/1-322 LVMVKDNHIV AAGGVEKAVR GARQAADFSL KVEVECSSLQ EAVDAAEAGA bmy_00763T0/1-309 LVMVKDNHVM AAGGVEKAVR GARQAADFSL KVEVECSSLQ EAVEAAEAGA BACU011923/1-299 LVMVKDNHVM AAGGVEKAVR GARQAADFSL KVEVECSSLQ EAVEAAEAGA 251 300 ENSP00000378782/1-297 DLVLLDNFKP EELHPTATVL KAQFPSVAVE ASGGITLDNL PQFCGPHIDV ENSBTAP00000024072/1-299 DLVLLDNFRP EELHPTAATL KAQFPSVSVE ASGGVRLDNL PQFCGPHIDV ENSTTRP00000005045/1-322 DLVLLDNFRP EELHPTAAAL KARFPNVGVE ASGGITLDSL PQFCGPHIDV bmy_00763T0/1-309 DLVLLDNFRP EELHPTAAAL KARFPTVGVE ASGGVTLDSL PQFCGPHIDV BACU011923/1-299 DLVLLDNFRP EELHPTAAAL KARFPNVGVE ASGGVTLDSL PQFCGPHIDV 301 350 ENSP00000378782/1-297 ISMGMLTQAA PALDFSLKLF AKEVAPVPKI H-- ENSBTAP00000024072/1-299 ISLGMLTQAA PALDFSLKLF AEGATPVPHA RRS ENSTTRP00000005045/1-322 ISLGMLTQAA PALDFSLKLF AEGATPVPYA RR- bmy_00763T0/1-309 ISLGMLTQAA PALDFSLKLF AEGATPVPYA RRS BACU011923/1-299 ISLGMLTQAA PALDFSLKLF AEGATPVPYA RRS