KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:22:17 2014 Check: 00 .. Name: ENSP00000295213/1-538 Len: 624 Check: 2926 Weight: 1.00 Name: ENSBTAP00000024097/1-557 Len: 624 Check: 8606 Weight: 1.00 Name: ENSTTRP00000002040/1-539 Len: 624 Check: 3730 Weight: 1.00 Name: bmy_15309T0/1-498 Len: 624 Check: 7103 Weight: 1.00 Name: BACU008758/1-577 Len: 624 Check: 3687 Weight: 1.00 // 1 50 ENSP00000295213/1-538 MAENLKRLVS NETLRTLQEK LDFWLKEYN- ---------- ---TNTCDQN ENSBTAP00000024097/1-557 MADNLRRLVS NEALRSLQDK LESWLREYN- ---------- ---ANSCDQN ENSTTRP00000002040/1-539 MADNLRKLVS NESLRSMQNQ LESWLRQYN- ---------- ---KNSCDQN bmy_15309T0/1-498 MADNLRKLVS NESLRSMHDQ LESWLREYNN KEIALMSTVL ALQTNSCDQN BACU008758/1-577 MADNLRKLVS NESLRSMQDQ LESWLREYN- ---------- ---TNSCDQN 51 100 ENSP00000295213/1-538 LNHCLELIEQ VAKVQGQLFG ILTAAAQEGG RNDGVETIKS RLLPWLEASF ENSBTAP00000024097/1-557 LNHCLELIEQ VAKVQGQLFG ILTIAAQEGG HYDGVETIKS RLLPWLEASF ENSTTRP00000002040/1-539 LNHCLELIEQ VAKVQGQLFG IFATAAQEGG RYDGVETIKS RLLPWLEASF bmy_15309T0/1-498 LNHCLELIEQ VAEVQRQLFG IFTTAAQE-- ---------- ---------- BACU008758/1-577 LNHCLELIEQ VAEVQRQLFG IFTTAAQEGG HYDGVETIKS RLLPWLEASF 101 150 ENSP00000295213/1-538 TAASLGKSVD SKVPSLQDTF DRERHKDPSP RDRDMQQLDS NLNSTRSQCN ENSBTAP00000024097/1-557 TAASLGKPVD SKVPSLQDTF DKDRHKESGT --RDIQQLDA DLSATRNQLN ENSTTRP00000002040/1-539 TAASLGKPVD SKVPSLQDTF DKDGRKEFGA RDRDIQQLDA DLNATRNQLN bmy_15309T0/1-498 ---------- ---------- ---------- ---------- --------VT BACU008758/1-577 TAASLGKPVD SKVSSLQD-- ---GHKESGA RDRDIQQLDA DLNATRHQLN 151 200 ENSP00000295213/1-538 QVQDDLVETE KNLEESKNRS AISLLAAEEE INQLKKQLKS LQAQEDARHR ENSBTAP00000024097/1-557 QVQDDMAETE KTLEEPKNRS AISLLAAEEE INQLKKQLKS LQAQEESRHR ENSTTRP00000002040/1-539 QVQDDMAETE KTLKETKNRS AISLLTAEGE INQLRKQLTS LQAQEESRHR bmy_15309T0/1-498 DFSYSMAETE KTLQETKNRS AISLLTAEEE INQLRKQLKS LQAQEESRHR BACU008758/1-577 QVQDDMAETE KTLEESKNRS AISLLTAEEE INQLRKQLKS LQAQEESRHR 201 250 ENSP00000295213/1-538 NTDQRSSENR RSEPWSLEER KREQW--NSL KQNADQQDTE AMSDYKKQLR ENSBTAP00000024097/1-557 NSDRRRSEKR GSERRRVELR GSEQRVSDLD RRSANQRNAE AVCDYEKQLR ENSTTRP00000002040/1-539 HSEHRSSEKR GSERRREELR G-EQM--GAD RWSVDQRKAE EICDYEKQLR bmy_15309T0/1-498 HSEHGSSEKR GSERRREELR GSEQM--GAD GWSVDQRKAE AICDYEKQLR BACU008758/1-577 HSEHRSSEKR GSERRREELQ GSEQM--GAD GWSVDQRKAE AICDYEKQLR 251 300 ENSP00000295213/1-538 NLKEEIAVLS AEKSALQGRS SRSRSPSPAP ---------- ----RSRSCS ENSBTAP00000024097/1-557 TLKDEIAVLS AEKSVLQGRS ARSRSPSPAP CSRSHSHSRS HSRSHSRSHS ENSTTRP00000002040/1-539 MLKDEIAVLS AEKSVLQGRS ARIRSPSPDP ---------- ----RSRGRS bmy_15309T0/1-498 TLKDEIAVLS AEKSVLQGRS ARSRSPSPDP ---------- ----RSHGRS BACU008758/1-577 TLKDEIAVLS AEKSVLQGRS ---RSPSPDP ---------- ----RSHGRS 301 350 ENSP00000295213/1-538 RS------RS ASPSTAV-KV RRPSPNRSKL SNVARKAALL SRFSDSYSQA ENSBTAP00000024097/1-557 RSHSHSRSRS TSPSSA--KA RTPSPNRAKL SSVARKAALL SRFSDAYSQG ENSTTRP00000002040/1-539 RSR-----RS TSPSTAVAKV RSPSPSRAKL SSVARKAALL SRFSDVYSQT bmy_15309T0/1-498 RSHGRSRSRS TSPNTAVAKV RSPSPSRAKL SSVARKAALL SRFSDAYSQT BACU008758/1-577 RSHDRSRSRS ASPSTAVAKV RSPSPSRAKL SSAARKAALL SRFSDAYSQT 351 400 ENSP00000295213/1-538 RLDAQCLLRR CIDKAETVQR IIYIATV--- ------EAFH VAKMAFRHFK ENSBTAP00000024097/1-557 RLDAQCLLRR CIDKAETVQR IIYIATV--- ------EAFH VAKMAFRHFK ENSTTRP00000002040/1-539 RLDAQCLLRR CIHNAETVQR IIYIAAV--- ------EAFH VAKTAFRHFK bmy_15309T0/1-498 RLDAQCLLRR CIDKAETVQR IIYIAAVINL LYFYVQEAFH VAKVAFRHFK BACU008758/1-577 RLDAQCLLRR CIDKAETVQR IIYIAAV--- ------EAFH VAKVAFRHFK 401 450 ENSP00000295213/1-538 IHVRKSLTPS YVGSNDFENA VLDYVICHLD LYDSQSSVND VIRAMNVNPK ENSBTAP00000024097/1-557 IRVRKSLTPS CAGSNDFEDA VSDYIICHLD LYDSQSSVND VIRAMNVNPK ENSTTRP00000002040/1-539 IRVRKSLTSS YAGSNDFEDD VLDYIVCHLD LYDSQSSVND VIRAMNVNPK bmy_15309T0/1-498 IRVRKSLTPS YAGSNDFEDA VLDYIICHLD LYDSQSSVND VIRAMNVNPK BACU008758/1-577 IRVRKSLTPS YAGSNDFEDA VLDYIICHLD LYDSQSSVND VIRAMNVNPK 451 500 ENSP00000295213/1-538 ISFPPVVDFC LLSDFIQEIC CIAFAMQALE PPLDIAYGAD GEVFNDCKYR ENSBTAP00000024097/1-557 ISFPPEVDFC LLSNFIQEIC CIAFAMQTLE PPLDIAFGAD GEIFNDCKYR ENSTTRP00000002040/1-539 ISFPPEVDFR LLSNFIQEIC CIAFAMQTLD PPLDIAVGAD GEVFNDCKYR bmy_15309T0/1-498 ISFPPEVDFC LLSNFIHEIC CIAFAMQTLD PPLDIAFGAD GEIFNDCKYR BACU008758/1-577 ISFPPEVDFC LLSNFIHEIC CIAFAMQTLD PPLDIAFGAD GEIFNDCKYR 501 550 ENSP00000295213/1-538 RSYDSDFTAP LVLYHVWPAL MENDCVIMKG EAVTRRGAFW NSVRSVSRCR ENSBTAP00000024097/1-557 RSYDSDFTAP LVFYHVWPAL MENDCVIMKG EAVTRRGAFW NSVRSVSRCR ENSTTRP00000002040/1-539 RSYDSDFTAP LVFYHVWPAL MENDCVIMKG EAVTRRGAFW NSVRSLSRCR bmy_15309T0/1-498 RSYDSDFTAP LVFYHVWPAI MENDCIIMKG EAVTRRGAFW NSVRSLSRCR BACU008758/1-577 RSYDSDFTAP LVFYHVWPAI MENDCIIMKG EAVTRRGAFW NSVRSLSRCR 551 600 ENSP00000295213/1-538 SRSLSPICPR SQIGLNTM-- ---------- ---------- ------SRSR ENSBTAP00000024097/1-557 SRSLSPICPR TRIGLGMI-- ---------- ---------- ------SRSR ENSTTRP00000002040/1-539 SRSLSPICPR SRVSLSTI-- ---------- ---------- ------SRSR bmy_15309T0/1-498 SRSLSPICPR SRISLSTI-- ---------- ---------- ------SRSR BACU008758/1-577 SRSLSPICPR SRISLSTVRI CLIIFTQNHL MVDVFFLSTV TYKRGDDKFV 601 650 ENSP00000295213/1-538 SPSPIRCGLP RF-------- ---- ENSBTAP00000024097/1-557 SPSPIRCGLP RF-------- ---- ENSTTRP00000002040/1-539 SPSPIRCGLP RF-------- ---- bmy_15309T0/1-498 SPSPIRYGLP RF-------- ---- BACU008758/1-577 GRKRTYYNHP RLIFILPWLR NLSF