KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:22:18 2014 Check: 00 .. Name: ENSBTAP00000024098/1-359 Len: 392 Check: 4794 Weight: 1.00 Name: ENSTTRP00000016203/1-378 Len: 392 Check: 8080 Weight: 1.00 Name: bmy_19877T0/1-347 Len: 392 Check: 3923 Weight: 1.00 Name: BACU003842/1-374 Len: 392 Check: 6804 Weight: 1.00 // 1 50 ENSBTAP00000024098/1-359 ---------- --------TK LSSVLMARVF YFSPALLWAA QMLL------ ENSTTRP00000016203/1-378 VLKKISVLEA AGDLNTVTMK LGCVLMAGVF YFSPAMLWAA QMLL------ bmy_19877T0/1-347 ---------- ---------- ----SFSGSS RTTPSS---- ---------- BACU003842/1-374 ---------- --------MK LGCVLKAGAF YFSPAMLWAA QMLLASVSGS 51 100 ENSBTAP00000024098/1-359 -------AAS FEALQCKGPA STQDSMCHPE DDLTDPREVS FQVKGYTFSE ENSTTRP00000016203/1-378 -------AAG FEALQCEGPV STQEGSCHTE DDLTDPREVD FQVKGYTFSE bmy_19877T0/1-347 -------AAS FEALQCEGPV STQDSSCHPE DDLKDPREVD FQVKGYTFSE BACU003842/1-374 SRTTPSSAAS FEALQCEGPV STQESSCHPE DDLTDPREVD FQVKGYTFSA 101 150 ENSBTAP00000024098/1-359 PVHLTVSYDW LILQSPAKPI FEGDPLVLRC LAWQDWPLTQ VTFYRDGAAL ENSTTRP00000016203/1-378 PFHLIVSYDW LILQSPAWPI FEGDPMVLRC QAWQDWPLTQ VTFYQDGSAL bmy_19877T0/1-347 PFHLVVSYDW LILQSPTWPI FEGDPLVLRC QAWQDWPLTQ VTFYQDGSAL BACU003842/1-374 PFHLVVSYDW LILQSPTWPI FEGDPLVLRC QAWQDWPLTQ VTFYQDGSAL 151 200 ENSBTAP00000024098/1-359 GPPGPSKEIS ITVAQKADSG HYHCSAVLRS PGPGSPETAS PVALTVHELF ENSTTRP00000016203/1-378 GPPGPNKEFS IAVARKADSG HYHCSAIFRS PGPGSPETAS PVAITVQELF bmy_19877T0/1-347 GPPGPNKEFS IAVVQKEDSG HYHCSAIFRS PGPGSPETAS PVAITVQELF BACU003842/1-374 GPPGPNKEFS IAVAQKEDSG HYHCSAIFRS PGPGSPETAS PVAITVQELF 201 250 ENSBTAP00000024098/1-359 RAPVLRVTPS AEPQEGKPVT LSCQTKLPLQ RSSARLLFSF YKDGRTMRSR ENSTTRP00000016203/1-378 RAPVLRATPS AEPQEGSPVT LSCQTKLPLQ RSAAHLLFSF YKDSRTVRSR bmy_19877T0/1-347 RAPVLRATPS AEPQEGSPVT LSCQTKLPLQ RSAARLLFSF YKDSRTVRSR BACU003842/1-374 RAPVLRATPS AEPQEGSPVT LSCQTKLPLQ RSAVRLLFSF YKDSRTVRSR 251 300 ENSBTAP00000024098/1-359 GPSPEFQIPT VSEAHSGAYW CEAATEDNQV WKQSPKLEIR VQGPSRSAAP ENSTTRP00000016203/1-378 GPSSEFQIPT ASEAHSGSYW CEAATEDNQV WKQSPKLEIR VQGPSSSAAP bmy_19877T0/1-347 GPSSEFQIPT ASEAHSGSYW CEAATEDNQV WKQSPKLEIR VQGPSSSAAP BACU003842/1-374 GPSSEFQIPT ASEAHSGSYW CEAATEDNQV WKQSPKLEIR VQGPSSSAAP 301 350 ENSBTAP00000024098/1-359 TTLTPAPQKP DAPETTSTKP PGPLPPLSTP SSKDPDSFSP LQGPDPHLYH ENSTTRP00000016203/1-378 PTLNPAPQKS AAPETTSTEP PGPLPPLPTP SSKDLGSSSP LHFPDPHLHH bmy_19877T0/1-347 PTLNPAPQKS AAPETTSTEP PGPLPPRPTP SSKDLGSSSP LQFPDPHLHH BACU003842/1-374 PTLNPAPQKS AAPETTSTEP PGPLPPRPTP SSKDLGSSSP LQFPDPHLHH 351 400 ENSBTAP00000024098/1-359 QMGVLLKQIQ DMRVLLGHLV IELRDLSSHL KLETTKGPTK -- ENSTTRP00000016203/1-378 QMRVLLKQIQ DMRVILGHLV MELRDLSSHL KLQATKDPAK Y- bmy_19877T0/1-347 QMGVLLKQIQ DMRVILGHLV MELRDLSGHL KLETTKGPAK YE BACU003842/1-374 QMGVLLKQMQ DMRVILGHLV MELRDLSSHL KLKTTKGPAK YE