KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:22:23 2014 Check: 00 .. Name: ENSP00000355958/1-730 Len: 747 Check: 3100 Weight: 1.00 Name: ENSBTAP00000024147/1-730 Len: 747 Check: 2621 Weight: 1.00 Name: bmy_07403T0/1-747 Len: 747 Check: 7878 Weight: 1.00 Name: ENSTTRP00000001915/1-730 Len: 747 Check: 5856 Weight: 1.00 Name: BACU011095/1-661 Len: 747 Check: 7139 Weight: 1.00 // 1 50 ENSP00000355958/1-730 MLFNSVLRQP QLGVLRN--- ---------- ----GWSSQY PLQSLLTGYQ ENSBTAP00000024147/1-730 MLFNSVLRQP QFGVPRN--- ---------- ----GWSSQY PLQSLLTGYQ bmy_07403T0/1-747 MLFNSVLRQP QFGVPRNVLK CDILELYKEF CLTLGWSSQY PLQSLLTGYQ ENSTTRP00000001915/1-730 MLFNSVLRQP QFGVPRN--- ---------- ----GWSSQY PLQSLLTGYQ BACU011095/1-661 ---------- ---------- ---------- ----GWSSQY PLQSLLTGYQ 51 100 ENSP00000355958/1-730 CSGNDEHTSY GETGVPVPPF GCTFSSAPNM EHVLAVANEE GFVRLYNTES ENSBTAP00000024147/1-730 CNYNDEHTSY GETGTPVPPF GCTFSSAPSM EHILAVANEE GFVRLYNTES bmy_07403T0/1-747 CNYNDEHTSY GETGAPVPPF GCTFSSAPNM EHILAVANEE GFVRLYNTES ENSTTRP00000001915/1-730 CNYNDEHTSY GETGAPVPPF GCTFSSAPNM EHILAVANEE GFVRLYNTES BACU011095/1-661 CNYNDEHTSY GETGAPVPPF GCTFSSAPNM EHILAVANEE GFVRLYNTES 101 150 ENSP00000355958/1-730 QSFRKKCFKE WMAHWNAVFD LAWVPGELKL VTAAGDQTAK FWDVKAGELI ENSBTAP00000024147/1-730 HTSRKKCIKE WMAHWNAVFD LAWVPGEFKL VTAAGDQTAK FWDVNAGELI bmy_07403T0/1-747 QTSRKKCVKE WMAHWNAVFD LAWVPGELKL VTAAGDQTAK FWDVKAGELI ENSTTRP00000001915/1-730 QTSRKKCVKE WMAHWNAVFD LAWVPGELKL VTAAGDQTAK FWDVKAGELI BACU011095/1-661 QTSRKKCVKE WMAHWNAVFD LAWVPGELKL VTAAGDQTAK FWDVKAGELI 151 200 ENSP00000355958/1-730 GTCKGHQCSL KSVAFSKFEK AVFCTGGRDG NIMVWDTRCN KKDGFYRQVN ENSBTAP00000024147/1-730 GTCKGHQCSL KSVAFSKFEK AVFCTGGRDG NIMVWDTRCN KKDGFYRQVN bmy_07403T0/1-747 GTCKGHQCSL KSVAFSKFEK AVFCTGGRDG NIMVWDTRCN KKDGFYRQVN ENSTTRP00000001915/1-730 GTCKGHQCSL KSVAFSKFEK AVFCTGGRDG NIMVWDTRCN KKDGFYRQVN BACU011095/1-661 GTCKGHQCSL KSVAFSKFE- ---------- ---------- -KDGFYRQVN 201 250 ENSP00000355958/1-730 QISGAHNTSD KQTPSKPKKK QNSKGLAPSV DFQQSVTVVL FQDENTLVSA ENSBTAP00000024147/1-730 QISGAHNTLD KQTPSKPKKK QNSKGLAPSV DFQQSVTVVL FQDENTLVSA bmy_07403T0/1-747 QISGAHNTLD KQTPSKPKKK QNSKGLAPSV DFQQSVTVVL FQDENTLVSA ENSTTRP00000001915/1-730 QISGAHNTLD KQTPSKPKKK QNSKGLAPSV DFQQSVTVVL FQDENTLVSA BACU011095/1-661 QISGAHNTLD KQTPSKPKKK QNSKGLAPSV DFQQSVTVVL FQDENTLVSA 251 300 ENSP00000355958/1-730 GAVDGIIKVW DLRKNYTAYR QEPIASKSFL YPGSSTRKLG YSSLILDSTG ENSBTAP00000024147/1-730 GAVDGIIKIW DLRKNYTAYR QEPIASKSFL YPGSSTRKLG YSSLILDSTG bmy_07403T0/1-747 GAVDGVIKIW DLRKNYTAYR QEPIASKSFL YPGSSTRKLG YSSLILDSTG ENSTTRP00000001915/1-730 GAVDGVIKIW DLRKNYTAYR QEPIASKSFL YPGSSTRKLG YSSLILDSTG BACU011095/1-661 GAVDGVIKIW DLRKNYTAYR QEPIASKSFL YPGSSTRKLG YSSLILDSTG 301 350 ENSP00000355958/1-730 STLFANCTDD NIYMFNMTGL KTSPVAIFNG HQNSTFYVKS SLSPDDQFLV ENSBTAP00000024147/1-730 STLFANCTDD NIYMFNMTGL KTSPVAVFSG HQNSTFYVKS SISPDDQFLV bmy_07403T0/1-747 STLFANCTDD NIYMFNMTGL XTSPVAIFNG HQNSTFYVKS SISPDDQFLV ENSTTRP00000001915/1-730 STLFANCTDD NIYMFNMTGL KTSPVAIFNG HQNSTFYVKS SISPDDQFLV BACU011095/1-661 STLFANCTDD NIYMFNMTGL KTSPVAIFNG HQNSTFYVKS SISPDDQFLV 351 400 ENSP00000355958/1-730 SGSSDEAAYI WKVSTPWQPP TVLLGHSQEV TSVCWCPSDF TKIATCSDDN ENSBTAP00000024147/1-730 SGSSDEAAYI WKVSMPWHPP TVLLGHSQEV TSVCWCPSDF TKIATCSDDN bmy_07403T0/1-747 SGSSDEAAYI WKVSIPWHPP TVLLGHSQEV TSVCWCPSDF TKIATCSDDN ENSTTRP00000001915/1-730 SGSSDEAAYI WKVSIPWHPP TVLLGHSQEV TSVCWCPSDF TKIATCSDDN BACU011095/1-661 SGSSDEAAYI W--------- ---------- ---------- -KIATCSDDN 401 450 ENSP00000355958/1-730 TLKIWRLNRG LEEKPGGDKL STVGWASQKK KESRPGLVTV TSSQSTPAKA ENSBTAP00000024147/1-730 TLKVWRLNRD LEEKSGGDKL SIVGWASQKK REVKADLVAV PSSQSTPAKA bmy_07403T0/1-747 TLKVWRLNRD LEEKSGGDKL SIVGWASQKK REARADLVTV TSSQSTPAKA ENSTTRP00000001915/1-730 TLKVWRLNRD LEEKSGGDKL SIVGWASQKK REARADLVTV TSSQSTPAKA BACU011095/1-661 TLKVWRLNRD LEEKSGGDKL SIVGWASQKK REARADLVTV TSSQSTPAKA 451 500 ENSP00000355958/1-730 PRAKCNPSNS SPSSAACAPS CAGDLPLPSN TPTFSIKTSP AKARSPINRR ENSBTAP00000024147/1-730 PRAKSSPCTS SPSSAACAPS CAGDLPLPSN TPTFSLKTPP AKARSPISRR bmy_07403T0/1-747 PRVKSSPSIS SPSSAACAPS CAGDLPLPSN TATFSLKTPP AKTRSPISRR ENSTTRP00000001915/1-730 PRVKSSPCIS SPSSAACAPS CAGDLPLPSN TATFSLKTPP AKTRSPISRR BACU011095/1-661 PRVKSSPSIS SPSSAACAPS CAGDLPLPSN TATFSLKTPP AKTRSPISRR 501 550 ENSP00000355958/1-730 GSVSSVSPKP PSSFKMSIRN WVTRTPSSSP PITPPASETK IMSPRKALIP ENSBTAP00000024147/1-730 GSVSSVSPKP PSSFKMSIRN WMTRTASLSP PVTPPASETK ITSPRKALIP bmy_07403T0/1-747 GSVSSVSPKP PSSFKMSIRN WMTRTPSLSP PMTPPASETK IMSPRKALIP ENSTTRP00000001915/1-730 GSVSSVSPKP PSSFKMSIRN WMTRTPSLSP PMTPPASETK IMSPRKALIP BACU011095/1-661 GSVSSVSPKP PSSFKMSIRN WMTRTPSLSP PMTPPASETK IMSPRKALIP 551 600 ENSP00000355958/1-730 VSQKSSQAEA CSESRNRVKR RLDSSCLESV KQKCVKSCNC VTELDGQVEN ENSBTAP00000024147/1-730 VSLKSSQAVA CSESRNRVKR RLDSSCLENV KQKCVKSCSC VTELDDPVEK bmy_07403T0/1-747 VSLKSSQAVA CSESRNRVKR RLDSSCLENV KQKCVKSCNC VTELDDPVEK ENSTTRP00000001915/1-730 VSLKSSQAVA CSESRNRVKR RLDSSCLENV KQKCVKSCNC VTELDDPVEK BACU011095/1-661 VSLKSSQAVA CSESRNRVKR RLDSSCLENV KQKCVKSCNC VTELDDPVEK 601 650 ENSP00000355958/1-730 LHLDLCCLAG NQEDLSKDSL GPTKSSKIEG AGTSISEPPS PISPYASESC ENSBTAP00000024147/1-730 LHLDLCCLAG AQEDLGKDSL GPTKPSKIEG ASMSVSEPPS PASPYASEGC bmy_07403T0/1-747 LHLDLCCLAG NQEDLGKDSL GPTKPSKIEG TSMSVTEPPS PASPYASEGC ENSTTRP00000001915/1-730 LHLDLCCLAG NQEDLGKDSL GPTKPSKIEG TSMSVTEPPS PASPYASEGC BACU011095/1-661 LHLDLCCLAG NQEDLGKDSL GPTKPSKIEG TSMSVTEPPS PASPYASEGC 651 700 ENSP00000355958/1-730 GTLPLPLRPC GEGSEMVGKE NSSPENKNWL LAMAAKRKAE NPSPRSPSSQ ENSBTAP00000024147/1-730 GTLPLPLGSC GEGSEVVGKE NSSPENKNWL LAMAAKRKAE NSSPRSPSSQ bmy_07403T0/1-747 GTLPLPLGSC GEGSEVVGKE NSSPENKNWL LAMAAKRKAE NSSPRSPSSQ ENSTTRP00000001915/1-730 GTLPLPLGSC GEGSEVVGKE NSSPENKNWL LAMAAKRKAE NSSPRSPSSQ BACU011095/1-661 GTLPLPLGSC GEGSEVVGKE NSSPENKNWL LAMAAKRKAE NSSPRSPSSQ 701 750 ENSP00000355958/1-730 TPNSRRQSGK KLPSPVTITP SSMRKICTYF HRKSQEDFCG PEHSTEL ENSBTAP00000024147/1-730 TPNPRRQSGK TSPGPVTITP SSMRKICTYF HRKSQDDFCS PEQSTEL bmy_07403T0/1-747 TPNPRRQSGK TSPGPVTITP SSMRKICTYF HRKSQDGYCS PEQSTEL ENSTTRP00000001915/1-730 TPNPRRQSGK TSPGPVTITP SSMRKICTYF HRKSQDGYCS PEQSTEL BACU011095/1-661 TPNPRRQSGK TSPGPVTITP SSMRKICTYF HRKSQDGYCS PEQSTEL